Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00814 AGTCATTTCATTCCCAAATGAAATCATCTCCTTCGACGGCTCACCTAAGCCTAAAACTTATTAATCTTTCCATTTAATCTTACCTATTAAACATTCAATTACTTCCCCTCAATTCGTAGTCCTATAACTATTTCCCTTCATTGATCTTTTCAGTTTCCCTAAATTCAACATTCATGGAGTTTTTCACATATCCCACTTCTAAATTTCTAACCAAACCATTCTAGTTTCAATTACAATCGAAATTGGGCTGATTCTCTCATCTGGGTCTTCTTCAAAAACTTCCAAACCCTTGAATTCGAGTTTATTTCTTCATCATTTTGCAGAATCTCGACATGGGTCCGTCGGAGAAGGAGCTGAAAGATATAATGGTGAGTCAACTGCCAGAGACTGTTAGGGAAATTTCAGGGCTTCCCGAGTACAACGGCGTCTGTAAGAAGATGTATGGGGACCTGATTCGAAGGGTCAAATTATTGAGCCCTTTGTTTGAGGAATTAAGAGATGGAGAAGAAGAACTCGGATTCGATGTTCTTAAAGGCTTGGAGTTGCTTAAAACTGCTTTGGATTCTGCTACAGAGCTTCTTAAGTCGGTCAGCCGAGGAAGCAAGCTATTTCAGGCTTCGCAGTTGGAGAAGATTGTACTTGAGTTTCATCATATGACGGAAGATATTGAAGCAGCACTCAGCAAGCTTCCCATCGACAAGCTTGGGATCTCGGACGAGGTTCGAGAACAGACTGAACTTGTTCATGCACAATTCAAACGAGCGAAAGAGAGAATAACTTTAGCTGATGCACAGTTAGACAAGGATTTAGCCATATTACAGGAAGAAAAAGATTCTGATCCTACAATATTGAAGAGACTTTCTGAAAAGCTGCATCTTCGAACTATAAACGATCTAAAGAAAGAGTCACTAGCGATCCATGAGTTAGTGACCTCAAGCGATGGAGATCTCGAGGACGTTTTTGGAAAAATGTCATCTGTTTTAAAGAAGCTGAAGGATTTTGTACAATCAGAAAACCCAGAAGTTGAAACTTCTCAAGACGAAAAAACTACAACCATTAAACACAGATCTCCCGTCATCCCAGACGATTTCAGGTGCCCTATATCTCTTGAATTGATGAGGGATCCGGTCATTGTCTCCACCGGGCAGACTTATGAGAGATCCTGCATTCAGAAATGGTTGGATGCAGGGCACAAAACTTGTCCAAAATCTCAGCAGGCTTTATCACATACAGCCTTAACACCAAATTACGTTTTGAAGAGTCTAATTGCTTTATGGTGTGAGAACAATGGCGTTGAACTGCCAAGGAAGCAAGGTAGCTGTAGAAACAAGAAACCCGGAAACAATGTTTCAGACTGTGATCGGGCGGCCATCGATACCTTACTAGTAAAACTGGTAAATGGATCTCCAGAACAGAAAAGATCAGCTGCAGGTGAGCTCCGGTTACTAGCGAAGAGGAATACGGATAACAGAATTTGTATTGCCGAGGCAGGAGCCATTCCATTCCTTGTCGAACTATTATCCTCAAATGATACTAGAACCCAGGAGCATGCAGTTACAGCATTATTGAATCTTTCAATCAACGATGGTAACAAAAGAACTATTGTCAATTTACGAGCCATACCCGCTATAGTAGAAGTGTTGAAAAATGGCAGTATGGAGGCAAGGGAAAATGCAGCTGCAACCCTTTTCAGCTTATCAGTAATAGACGAGAATAAGGTTGCAATCGGAGCAGCTGGGGCAATTCCTGCTCTTATTAGTTTGCTACAAGAAGGGACTCCGAGAGGGAAGAAGGATGCTGCCACTGCTATTTTCAATCTTTCGATCTATCAGGGAAATAAAGCAAGAGCAATAAGGGCAGGCATTGTGAATCCACTTATGGGATTTCTGAAAGATGCTGGAGGTGGAATGGTTGATGAAGCTCTAGCCATTCTAGCCATTCTTGCAACTCACCATGAAGGAAAGATGGGAATAGGGGAAGCTGGGCCGATGGCAATTCTGTTGGAGTTCATCAGAACCGGTTCTCCACGGAACCGGGAGAATGCTGCTGCGGTGTTGTGGTCGCTTTGTAGTACTGATTTTGAGCAGTTGAAGCTAGCTAGGGAACATGGTGCAGAAGAGGCATTAAAGGAAGTATCTGAGAATGGCACAGACAGAGCAAAGAGGAAAGCAGGAAGCATTTTAGAACTCTTTCAACGCTTTGATGGACAATCAGCTAATCTATAAACAATTTGGCTATTAATTTATTTAATCAACTGGGGGTTATAGAAATCAAGTCAATGCCATCTTGCCCTTGTAATTACAAGGCATTAAAAGTGAAGGTACCATCACTTTTTTTATAATGTAATATATTTTATTGTATTTATGATTAAGGAATTCTATTTTTGTAGTTTGAA 2395 41.09 MGPSEKELKDIMVSQLPETVREISGLPEYNGVCKKMYGDLIRRVKLLSPLFEELRDGEEELGFDVLKGLELLKTALDSATELLKSVSRGSKLFQASQLEKIVLEFHHMTEDIEAALSKLPIDKLGISDEVREQTELVHAQFKRAKERITLADAQLDKDLAILQEEKDSDPTILKRLSEKLHLRTINDLKKESLAIHELVTSSDGDLEDVFGKMSSVLKKLKDFVQSENPEVETSQDEKTTTIKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKSQQALSHTALTPNYVLKSLIALWCENNGVELPRKQGSCRNKKPGNNVSDCDRAAIDTLLVKLVNGSPEQKRSAAGELRLLAKRNTDNRICIAEAGAIPFLVELLSSNDTRTQEHAVTALLNLSINDGNKRTIVNLRAIPAIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIPALISLLQEGTPRGKKDAATAIFNLSIYQGNKARAIRAGIVNPLMGFLKDAGGGMVDEALAILAILATHHEGKMGIGEAGPMAILLEFIRTGSPRNRENAAAVLWSLCSTDFEQLKLAREHGAEEALKEVSENGTDRAKRKAGSILELFQRFDGQSANL 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28780373 28783530 - XM_039036015.1 Bhi07g00814 39203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00814 630 SUPERFAMILY ARM repeat 346 620 IPR016024 -
Bhi07g00814 630 SMART Ubox_2 252 315 IPR003613 GO:0004842|GO:0016567
Bhi07g00814 630 Gene3D - 333 621 IPR011989 -
Bhi07g00814 630 SMART arm_5 376 416 IPR000225 GO:0005515
Bhi07g00814 630 SMART arm_5 458 498 IPR000225 GO:0005515
Bhi07g00814 630 SMART arm_5 417 457 IPR000225 GO:0005515
Bhi07g00814 630 SMART arm_5 540 580 IPR000225 GO:0005515
Bhi07g00814 630 SMART arm_5 499 539 IPR000225 GO:0005515
Bhi07g00814 630 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 322 IPR013083 -
Bhi07g00814 630 Pfam U-box domain 249 319 IPR003613 GO:0004842|GO:0016567
Bhi07g00814 630 ProSiteProfiles U-box domain profile. 248 322 IPR003613 GO:0004842|GO:0016567
Bhi07g00814 630 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 469 511 IPR000225 GO:0005515
Bhi07g00814 630 Pfam Armadillo/beta-catenin-like repeat 417 456 IPR000225 GO:0005515
Bhi07g00814 630 Pfam Armadillo/beta-catenin-like repeat 376 415 IPR000225 GO:0005515
Bhi07g00814 630 Pfam Armadillo/beta-catenin-like repeat 459 497 IPR000225 GO:0005515
Bhi07g00814 630 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 387 429 IPR000225 GO:0005515
Bhi07g00814 630 Gene3D - 11 122 IPR036537 GO:0007166
Bhi07g00814 630 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 12 623 - -
Bhi07g00814 630 SUPERFAMILY RING/U-box 247 323 - -
Bhi07g00814 630 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 428 470 IPR000225 GO:0005515
Bhi07g00814 630 PANTHER U BOX DOMAIN-CONTAINING 12 623 - -
Bhi07g00814 630 CDD RING-Ubox_PUB 253 295 IPR045210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00814 Bhi-Chr7:28780373 Bhi08g00620 Bhi-Chr8:20447784 0 dispersed
Bhi07g00814 Bhi-Chr7:28780373 Bhi08g00619 Bhi-Chr8:20447784 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00814 - - csv:101221065 1113.6