Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00888 GGAGGTGTTTGGGTTTTGGATTCATTTGGAAAAACAAAAAGAAAAAAAAAAATGCTTCTTTCCTTGCATTTCCCACTATTACCCACTAAGCAACAAGGGAAGGTGGTTGTTTTGTTATGTTAGGGCATGTTTGGCTTGAAGGTACTTTAATGGCAGGAATGTTTAATGGGGAGGGATCCTCGTCGGTAACTTCGTCGCCTTTGCAGCTCTTTCCGTGGTCGTTATCGCCCGGTATAGGATCACCTTACCCTTTTCTAAGGGAGCTCAAATCTGAAGAGAGGGGCTTGTGTCTGATTCACCTTCTTCTTGCCTGTGCCAACCAAGTTGCTATTGGTAACATTGAAAATGCTAATGTTGGCCTTGAGCAAATTTCCCACCTTGCTTCGCCCGACGGGGACACAATGCAGCGGATTGCTGCTTACTTCACTGAGGCACTCGCCGATCGAATACTTAAATCCTGGCCTGGCTTACACAAAGCCTTGAACTCTACCAAAATATTGTCGGTCCCTGAAGAGATTCTTGCCCAGAGATTGTTCTTTGAATTGTGTCCTTTCCTGAAGCTTGCATATGTGATAACTAATCAGGCTATTATAGAAGCCATGGAAGGAGAAAGGATGATTCATATTATTGATTTCAAATCTTGTGAACCTGCTCAGTGGATAAACCTTCTTCAGACATTGAAGGATAGGCCAGATGGTCCACCCCACTTGAGAATAACTGGTATTCATGAACAGAAGGAAGTGTTGGAACAAATGGCTCTTCGGCTTACTGAAGAGGCTGAAAAATGGGATATACCATTTCAATTCACCCCAGTTGTTAGCAAATTAGAAAACCTTGACCTTGAAAGTTTAAGGGTCAAGACAGGTGAAGCACTTGCAGTTAGCTCTGTACTTGAACTTCACTCGGTTTTGGCTACAGATGACGACAAGAAAACGTCCCCATCTGCATCGAAGAACTTGCAAAAACTCCTACGTATGAAGCAGCGAACACTTGGAGAGTGGCTCGAGACGGATTCATTGCAAGTTTTTAGTAGCCCGGATTCAGCCTCAGTATCTTCCCCATCAGGATTGAATCCTTCCCAAAAGATGAACAGTTTTTTGACTGCACTATGGGGCCTTTCTCCTAAAGTTATGGTAATAACTGAACAAGAATCAAACCTGAATGGATCTGCTTTCATGGAGAGAGTACTAGAAGCACTAAACTTCTATGCTGCATTGTTTGATTGCTTAGAGTCAACGGTGTCGCGATCATCTATAGAGCGACAAAGGGTTGAGAAGATGCTTTTAGGAGAGGAAATAAAAAACATCATTGCTTGTGAGGGAGCGGAGAGGACGGAGAGGCACGAAAAGCTCGAGAAATGGATGTTGAGGCTCGAATCTGTGGGGTTCGGAAAGGTTCCATTGAGTTATCATAGTATGTTATTGGGAAGTAGATTGTTGCAGAGCTATGGATATGATGGGTATAAAATCAAAGAAGAGAATGGATTTTTGTATATCTGCTGGCAAGATAGGCCTCTTTTTTCAGTTTCAGCTTGGGGGTTTCATAGGCAAAGCTGATGATGATGATAGATATAATTTCACTGCAAAGGAGGATTTGAATGCCTTTTAACTTTCTTCTTCTTTTTGTAATCAATTTTTATTGGCATAAATGGTGCTCAAAACTTCACTTCCTCAGCAAATGCATATTGTAACAAGGTTCTTCAGTTTCTCTTTTCCTTTTTTTTTTTTAGGCATTTGGTTTTATTTATTCTCTCGAAGTTTTCTTTTTTGAGCTCATCGTTGTTGTACATACAGCATTAATAGTCGAGGTTCAGGTTTTTGTTATCTAAA 1829 41.28 MLGHVWLEGTLMAGMFNGEGSSSVTSSPLQLFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSVLATDDDKKTSPSASKNLQKLLRMKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLTALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWMLRLESVGFGKVPLSYHSMLLGSRLLQSYGYDGYKIKEENGFLYICWQDRPLFSVSAWGFHRQS 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29967930 29970804 + XM_039036866.1 Bhi07g00888 39277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00888 479 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 15 475 - -
Bhi07g00888 479 Pfam GRAS domain family 59 473 IPR005202 -
Bhi07g00888 479 ProSiteProfiles GRAS family profile. 50 474 IPR005202 -
Bhi07g00888 479 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 475 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00888 Bhi-Chr7:29967930 Bhi07g00891 Bhi-Chr7:29968147 0 dispersed
Bhi07g00888 Bhi-Chr7:29967930 Bhi07g00889 Bhi-Chr7:29968116 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1516 PF03514 GRAS 1.00E-135 CL0063 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00888 - - cmo:103489486 914.835