Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00890 CCACTTCATATATTGACAAAACCCCATCAATTTAGAGAGAGGATTATGAATGTGGAGAGGGAAAATCTAGGTGGGTTTTCAGAGAAATTAAAGAAAGAAGCAAAATATGAAGTTTTTTCTTTCTTGGTCTCTGTAGTTTTGAAGTTGAAATTCCTTATTCTTCTGATCCTACCAAACAAGGACAAATCAATGGCGACAAAAACATACCCTTGTATTGTCTGTCTCTAACGCAGCCATGGAAAAGTCGTTCCGGACAAACCCTTTGATTCCAGGGTGCTCTGTTTCTTCATCAAAACCCCTCCACGCTTTTCTTTCAACCCAACACTCTCCCTTCTTCTATGAAATTGAATCTCTGTTTCGTTTAGCTGAGATAGACCATTTCTTCTTCTTTGTTCCTTTCTGGGTTTGAGGGAAATTCAGCTTTTTCTCTACCAACTACCCACCAGATCGTTTTGTTCATCTTCTGGTACTTTAATGGCAGGAATGTTTAATGGGGAGGGATCCTCGTCGGTAACTTCGTCGCCTTTGCAGCTCTTTCCGTGGTCGTTATCGCCCGGTATAGGATCACCTTACCCTTTTCTAAGGGAGCTCAAATCTGAAGAGAGGGGCTTGTGTCTGATTCACCTTCTTCTTGCCTGTGCCAACCAAGTTGCTATTGGTAACATTGAAAATGCTAATGTTGGCCTTGAGCAAATTTCCCACCTTGCTTCGCCCGACGGGGACACAATGCAGCGGATTGCTGCTTACTTCACTGAGGCACTCGCCGATCGAATACTTAAATCCTGGCCTGGCTTACACAAAGCCTTGAACTCTACCAAAATATTGTCGGTCCCTGAAGAGATTCTTGCCCAGAGATTGTTCTTTGAATTGTGTCCTTTCCTGAAGCTTGCATATGTGATAACTAATCAGGCTATTATAGAAGCCATGGAAGGAGAAAGGATGATTCATATTATTGATTTCAAATCTTGTGAACCTGCTCAGTGGATAAACCTTCTTCAGACATTGAAGGATAGGCCAGATGGTCCACCCCACTTGAGAATAACTGGTATTCATGAACAGAAGGAAGTGTTGGAACAAATGGCTCTTCGGCTTACTGAAGAGGCTGAAAAATGGGATATACCATTTCAATTCACCCCAGTTGTTAGCAAATTAGAAAACCTTGACCTTGAAAGTTTAAGGGTCAAGACAGGTGAAGCACTTGCAGTTAGCTCTGTACTTGAACTTCACTCGGTTTTGGCTACAGATGACGACAAGAAAACGTCCCCATCTGCATCGAAGAACTTGCAAAAACTCCTACGTATGAAGCAGCGAACACTTGGAGAGTGGCTCGAGACGGATTCATTGCAAGTTTTTAGTAGCCCGGATTCAGCCTCAGTATCTTCCCCATCAGGATTGAATCCTTCCCAAAAGATGAACAGTTTTTTGACTGCACTATGGGGCCTTTCTCCTAAAGTTATGGTAATAACTGAACAAGAATCAAACCTGAATGGATCTGCTTTCATGGAGAGAGTACTAGAAGCACTAAACTTCTATGCTGCATTGTTTGATTGCTTAGAGTCAACGGTGTCGCGATCATCTATAGAGCGACAAAGGGTTGAGAAGATGCTTTTAGGAGAGGAAATAAAAAACATCATTGCTTGTGAGGGAGCGGAGAGGACGGAGAGGCACGAAAAGCTCGAGAAATGGATGTTGAGGCTCGAATCTGTGGGGTTCGGAAAGGTTCCATTGAGTTATCATAGTATGTTATTGGGAAGTAGATTGTTGCAGAGCTATGGATATGATGGGTATAAAATCAAAGAAGAGAATGGATTTTTGTATATCTGCTGGCAAGATAGGCCTCTTTTTTCAGTTTCAGCTTGGGGGTTTCATAGGCAAAGCTGATGATGATGATAGATATAATTTCACTGCAAAGGAGGATTTGAATGCCTTTTAACTTTCTTCTTCTTTTTGTAATCAATTTTTATTGGCATAAATGGTGCTCAAAACTTCACTTCCTCAGCAAATGCATATTGTAACAAGGTTCTTCAGTTTCTCTTTTCCTTTTTTTTTTTTAGGCATTTGGTTTTATTTATTCTCTCGAAGTTTTCTTTTTTGAGCTCATCGTTGTTGTACATACAGCATTAATAGTCGAGGTTCAGGTTTTTGTTATCTAAA 2154 41.04 MAGMFNGEGSSSVTSSPLQLFPWSLSPGIGSPYPFLRELKSEERGLCLIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKILSVPEEILAQRLFFELCPFLKLAYVITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSVLATDDDKKTSPSASKNLQKLLRMKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLTALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWMLRLESVGFGKVPLSYHSMLLGSRLLQSYGYDGYKIKEENGFLYICWQDRPLFSVSAWGFHRQS 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29968117 29970804 + XM_039036867.1 Bhi07g00890 39279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00890 468 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 464 - -
Bhi07g00890 468 ProSiteProfiles GRAS family profile. 39 463 IPR005202 -
Bhi07g00890 468 Pfam GRAS domain family 48 462 IPR005202 -
Bhi07g00890 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 464 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00890 Bhi-Chr7:29968117 Bhi04g02455 Bhi-Chr4:66800897 4.80E-79 dispersed
Bhi07g00889 Bhi-Chr7:29968116 Bhi07g00890 Bhi-Chr7:29968117 0 tandem
Bhi07g00890 Bhi-Chr7:29968117 Bhi07g00891 Bhi-Chr7:29968147 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1518 PF03514 GRAS 9.50E-136 CL0063 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00890 - - csv:101203396 914.835