Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00927 AACCGCGTCGTAGAGGATCATTCGCTATAGTAAAAAATATACCAAAGCTCAGTTTCTGTCGCTATCCAGTAGTCCCTCAGAAGTCCCTTTCTCTTTCTTCTCATCACCGAGAGAAAGATCGCTTGTTCGTAACCCACCGGCAATTTCTCCGGCGAAGATTAATTTTGGAAATCTTTTGAGGTTTGCGGTTTCCGTGGTTCTTTCTTGTGTTTTTCATCGTTAACTTGAGTAGTGTCGCCGTCTATATCTAGCACTGGCCGTGGAGTTGGGGTCGAGTGGGTGTGGTGTGGAAGAAGTTGACCTTATTGCGCGGAGGTTGAGTTTCAGAGCTTGGAGAAGTGACTTTGAAGTTTTGGGGTTTTTTCTTTGGGGTTGTCAGCGGAAAGAATGTCTTTCCAGCATAAAAGTTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCGAGAATGGAAACCAAACGTGGCCATCAATGGTTCATGGATGGCAGTGCACCAGAGCTATTCAGTAATAAGAAGCAAGCAATCGAAGCTGTAAATTCTAGACCTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAGTCAGTTCCTGGACACTTTACTGATCGCCTTTTCGGCTCAGAGCCAATACGAACTGTCAACTTGGTTGATAGAGGCATGACTGTGGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTCGAGAATCATTTTACAAACAACCCATCCGTTGGCTTGTCCATGTCTCAATCCATTGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTTAGGGATCCTGACGTTGGCATGTCTGCTTCTTTGGGGCATGCCTATAGTAGGGGTGATAATTGTACAATTTCAATGGGTACAGCATTTAACAAAAACCATGAGAATGCCATATCATTGGGCCAAACTTATAATAGTAGAGATGAGAATGCCATCTCGGTTGGCCCTGCATATCACAAGACAGATGATAATTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGGAGTTTTATCACAATTGGTCATAACTATAGCAAGGGAGACAATAGCATCTTATCAATGAATCAGCCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGTCAAACTTATGAGAAGGCTGAAGGAAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCAAGAAAATTTTATATCAATGGGGCCAACCTATAGTAAGGCGGGTGATACTTTCATTTCAATGGCTTCATCCTTTAATAAGGGAAACGATGATAACTTATCCATGGGTCCAACCTATGACAAGGTGAACTCTGACATTGTACATGTCGGTCCTAAATTTGACAAAGCAGATTCTGGTGCTGTGTCAATGGCTCACAACTTTCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGACGAGAATGGGACAGATAATCCTTCTGGTGGGATTATTAGCAGTTACGACTTGTTAATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTATCAACCCTGAGAGATTCAGTTGAACCCAATGTGGAAGTAAACATTAACAATGCCATAAAGGTTGATGGGAAAATAGACACAAGTTCTAAGAATAAAGAGCCAAGGATGAGTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTTTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTGAAGGGAATTATTAAAGGGACTGGATACTTGTGCAGCTGTGACAACTGCAATCATTCAAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAATAACCATATTTACTTCGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGATGCTATTTGATGCAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGAACTTTCGTATGTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGAGATGGGGATTTACCTTTCTAAATTTTGAGACCTCAAAGATATACCTACCAGGGTATTTAATCACAGGATGGATTTGTAATCAAAACATTGCTAAAGTGAGTAAATTGTAAACCAGTAGTTGCAATCAAAGATGATATGGATGAGTGGTGATTGAAGAAGGCATTATTCGGTCGGGTCAGCCACCTGCCGACTTTTGAAGACATCATTTTGATCACGTGTGCATTGCGCAGAATGCCTTCTGCTTTTCCTTTCATGTTACATTTTGTTCTTTATATTATCCCCTCTTAGCAGAATTGTATTGAAGCATTTTAGCTACAATAGAATAGTATGAAACAACGATCTGGCTCTATGCAAGCTCAAAAACTAGTGGAAGGGCTTTGGTTCCAAACAAAAACAGAAATTATTATTAATATAGCCTTCCACAAATGCAAAAGTTACAAACACATTTTGGTTGAAATGAAAA 2605 40.54 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRMETKRGHQWFMDGSAPELFSNKKQAIEAVNSRPVPGVPHMNVSPWENTSSFQSVPGHFTDRLFGSEPIRTVNLVDRGMTVGNANMDMGRKEFENHFTNNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDPDVGMSASLGHAYSRGDNCTISMGTAFNKNHENAISLGQTYNSRDENAISVGPAYHKTDDNFISMGHAFSKGDGSFITIGHNYSKGDNSILSMNQPFDKGDDSFISMGQTYEKAEGNIISFGASYNKGQENFISMGPTYSKAGDTFISMASSFNKGNDDNLSMGPTYDKVNSDIVHVGPKFDKADSGAVSMAHNFHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASEVSTLRDSVEPNVEVNINNAIKVDGKIDTSSKNKEPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSPINQKNFRMWKASYQAATLELQRIYGKDEVIMPS 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31089681 31097425 - XM_039036076.1 Bhi07g00927 39316

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00927 584 MobiDBLite consensus disorder prediction 425 446 - -
Bhi07g00927 584 PANTHER N-LYSINE METHYLTRANSFERASE 1 584 - -
Bhi07g00927 584 Pfam Tify domain binding domain 477 532 IPR032308 -
Bhi07g00927 584 PANTHER AUTOIMMUNE REGULATOR 1 584 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00927 - - - csv:101206313 1155.97
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00927 Bhi-Chr7:31089681 Bhi10g00666 Bhi-Chr10:14678227 2.47E-43 dispersed
Bhi07g00927 Bhi-Chr7:31089681 Bhi10g00127 Bhi-Chr10:2843842 4.07E-17 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi11g02231 . 18 836 PHD Transcription Factor Family AT3G53680 53.9 8.4e-253 870.9
Bhi11g02230 . 18 813 PHD Transcription Factor Family AT3G53680 52.6 8.1e-240 827.8
Bhi07g00927 . 436 565 PHD Transcription Factor Family AT3G53680 54.6 1.8e-37 155.6
Bhi10g00666 . 343 468 PHD Transcription Factor Family AT3G53680 53.5 4.4e-36 151.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003985 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 8 1 0 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g00927 Bhi_Chr07 FPKM 0.952381 0.0 0.0 0.0 0.0 0.0 1.122406 0.0 0.0 0.0