Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g00940 AGACATTGAAATCTGGTTTAATACTTTACTTTCTCTCTCTATTTTCTCTCTCTAAAATAGACAAGCAGTGCCCCTCTTTCCCCTCCACAACCACTCTCTCTCTAATTCACTCTCAGATTACACTGAAAACTTCTCTGCTCTCACTACTCACTCACTCCACTCCACCGCTTCTCCTCTTTCATCTGATTATCCCAATATGTTCATTCTTCTGTTCGGGTGAGATAAAAAAGGTAAAATTAGGGTTTCTATACCTATTGGGCTTCTTTGAGTTTATCGTCTGCGGATTTTGGGCGGGCATGGTGGGCTCTGAGGAGGATTCTGGTACTTCTGGGGCGGCGGCGGTGCAGCTCTCTGGCGGTCGGAAAATGTTCTGGCGCTCGGCCTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTTCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCAAAGGCGGGGTCCGATGATATCGGTGAGTGGCTGCAACCTCCTACTCCAAGTGGCAGAGGAAACAGCGAGAGGTTGAAACTTGATTTGTCCACAATTCAGAGAAACCCAGATAAGAATTGTGGGCTGGTGAAGAGGGATAAGATTGCCTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCAGTTGCTCGGGACAGGGATATACTTAAACAAAATAGAATAACTCATGTGTTGAATTGTGTAGGTTTCGTTTGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCGGAAGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAACAAAATGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTTATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATTGCCGACCCGAATATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAATTGCTCCACACTCACCATATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCCCCGTCTGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATCGGTAAAAACTGTGAAGCAATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAGATTGTTCGATATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTGTTACCTTTAATGGATAAATCTAACAGTAAAATTAATCTTGGGGAATTAAAAGTTAAACCCTGTCCAGGGGAGAGGAAAGTTGGTTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTTCCTCCGTTTCCTTCATCTGAAAACGAGCATGAAACCCATCTTCCTGTCAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCGGGAAATATGAAAGAGTTTGTATCAGCTCCTCGAATAACCCTTTCTAGGGTCTATTCAGACTCGCTGATGATGGTGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATCTTCTTCTCCTATTTTTCTGTCACCGGACTCTCTCTCTTCTGATTCAAGTTCTAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCTGTTTCTTCATCACTGTCTAGTTTCTCTAACATGTCTCTTATCTCATCCAATAGTTCCTTAGAATGTATGCCCAATGGTCCAGAAACTCGTGATGCAGTCCCTTTGGAATCAAGTTCTCGCTCATTCTCATTCACATCCAAAAAGTTCTCTCCTTCTCTTGCAGAACGCCGAGGTACTGCGAAATCTCTTACATTGCCTACAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTTAAGAGGAAAAACAAGACTTCTTGCCCTCTTAATGTATCAATTAATATGAAAAATGGCTCAGAGCCTATGGATAGGATTGAAAATGAACAAACAAGTTCCACTCAGAATTTCAAGAATATTGAAAATGGAATGGACATGAGGATAGGTAGTGTGGCCTCGTGCCATCAGGAAACTAAAGTTGCTGGACAATCTGCTGGTTCATGGAAAAGCTATCCCAAACTTTTTGAAGAAAGCATGGTATCCACTGTCTCAAATGGAAAGCAAGATGGTGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGTAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTCTCTCTCCAAGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAAAAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACGGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATTGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGCCTGTTGTAGCCCCGCTGCTAATAGACATTTCCTTGATTTGGTAACCAAGATCATTCGATTGTTGAGCTGGCTTAGCGAGCCATGCAACTTAGTCATCAAAGATGAACTCCCCTTACGAAATTTAGTGAGGAGACGCTTGAAAATCCAAGTCGTTTTATAGCAAGTCTTAACAAAGTTGTACAGAGCTGTAACACCACGTAATTCAAATTTGATCTTGTAAACAATTTGCTGAAAAGGCCTTTGCCTAGCATATGTTATTGACTTTTGGCTTCTTAATAGGATCAATCAAATCTTTCTTTTAACT 3061 41.82 MVGSEEDSGTSGAAAVQLSGGRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWLQPPTPSGRGNSERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNRITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKINLGELKVKPCPGERKVGSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMKEFVSAPRITLSRVYSDSLMMVHFSAKSSSPSASSSPIFLSPDSLSSDSSSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSNMSLISSNSSLECMPNGPETRDAVPLESSSRSFSFTSKKFSPSLAERRGTAKSLTLPTMPSKIKATNSASRFLATQEDFKRKNKTSCPLNVSINMKNGSEPMDRIENEQTSSTQNFKNIENGMDMRIGSVASCHQETKVAGQSAGSWKSYPKLFEESMVSTVSNGKQDGEFVQPMVYCWPELEKIVAFDTSYLNSKAAVVILSPSSCKEG 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31621368 31626375 - XM_039036170.1 Bhi07g00940 39329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g00940 773 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311|GO:0016791
Bhi07g00940 773 SMART dsp_5 153 292 IPR020422 GO:0006470|GO:0008138
Bhi07g00940 773 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 769 - -
Bhi07g00940 773 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470|GO:0008138
Bhi07g00940 773 MobiDBLite consensus disorder prediction 523 550 - -
Bhi07g00940 773 MobiDBLite consensus disorder prediction 30 70 - -
Bhi07g00940 773 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0008138|GO:0016311
Bhi07g00940 773 PANTHER MKPA PROTEIN 1 769 - -
Bhi07g00940 773 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311|GO:0016791
Bhi07g00940 773 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Bhi07g00940 773 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 294 IPR029021 -
Bhi07g00940 773 SMART VILL_6 305 399 IPR007122 GO:0051015
Bhi07g00940 773 MobiDBLite consensus disorder prediction 102 121 - -
Bhi07g00940 773 Gene3D Severin 304 399 IPR029006 -
Bhi07g00940 773 CDD DSP 154 288 - -
Bhi07g00940 773 Gene3D Protein tyrosine phosphatase superfamily 140 295 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g00940 Bhi-Chr7:31621368 Bhi07g01804 Bhi-Chr7:49248779 0 dispersed
Bhi07g00939 Bhi-Chr7:31620959 Bhi07g00940 Bhi-Chr7:31621368 0 tandem
Bhi07g00940 Bhi-Chr7:31621368 Bhi07g00941 Bhi-Chr7:31621368 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g00940 - - csv:101223210 1336.63