Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01218 TTCAGCTTCCCACGAGTTCGGAAGAAGACAGCAGCAGAGCAGAGCAACACCGCTGAAATCTCAGTGGCCCCATTTTAACTCACTCTTTCTTCTCTTGTTGCTGCCGCCGCTCACCGGCCTGCCAGCCCTCCCATCTCTCTGCTCTTCGTCCTTAAGATGGAGATCGGGAAACATGATGATGGAGATGATAAAACAAAAAATGGAAAATCTAATATTTGCCAGGAATGTGGCGCTGAGTTCAGAAAGCCTGCTTACTTGAAGCAACATATGCAAAGCCATTCGCTCGAGAGGCCATATGTTTGTTCCGTAGATGGTTGTGAAGCCAGTTATAGGAGAAAGGATCATCTGACCCGTCACCTTCTCCACCATCAAGGAATTATATTCAAATGTCCGATTGAGAGCTGTTGCCGTGAATTTTCATATATATCATGTGTGAATAGACACTTGAAAGAATGCCATGAAGATGAAGCTTCTTCTGAAGAATGTCAGAAGCAGTTTGTGTGTCCCGAAGATGGATGTGGAAAGGTATTCAGATATGCGTCACAACTGCAAAAGCATGAGGATTCGCATGTCAAGCTAGACTCGATAGAGGCATATTGTACTGAACCCGGTTGCATGAAAACATTTACCAACAAGCAATGCCTAAGGGCTCATATGCAGTCCTGCCACCAATATGTCAAATGTGAAATTTGTGGGGAAAAAAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCACTGGAGGCAATTCCATGTACGTTTGAGGGCTGTAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACATGAAGGTGGTGCATCTGGGACAAAAGCCGTTTGCATGTTGTTTCCCTGGTTGTGGGATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGCCAGCATGTTTACACTAATGGGGATTTTGAAGAAGCTGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGAGGAAAAGAATCTGCCCAACTGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGAGTTGGATTTCATGATGGATTTCATGATGGATGAAGAATAATGTTAAACCAATGTATAGAAATCTGTAACTAGTAATATAAGCCCACCCCGTACCACCAGCAAAATGAGTTATATATATACTTTTTGTGCTTATTGGCAGTAAAATATGGAAGTTCTTGGTCGTATTCCTGTTGAAGTTCTACATTTTTGTTGGTTCCTCTGAACCTTTTTTGCTTGGCTTGGCATCATCGATTCATACAATCAAA 1312 42.84 MEIGKHDDGDDKTKNGKSNICQECGAEFRKPAYLKQHMQSHSLERPYVCSVDGCEASYRRKDHLTRHLLHHQGIIFKCPIESCCREFSYISCVNRHLKECHEDEASSEECQKQFVCPEDGCGKVFRYASQLQKHEDSHVKLDSIEAYCTEPGCMKTFTNKQCLRAHMQSCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTFEGCSKVFSTASNLQQHMKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTNGDFEEADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSELDFMMDFMMDEE 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 38173725 38176680 + XM_039035393.1 Bhi07g01218 39607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 49 71 IPR013087 -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 148 171 IPR013087 -
Bhi07g01218 316 PANTHER - 11 305 - -
Bhi07g01218 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Bhi07g01218 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 143 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 114 138 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 47 71 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 174 196 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 76 101 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 236 262 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 146 171 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 205 230 IPR013087 -
Bhi07g01218 316 SMART c2h2final6 19 41 IPR013087 -
Bhi07g01218 316 Gene3D Classic Zinc Finger 2 47 - -
Bhi07g01218 316 SUPERFAMILY beta-beta-alpha zinc fingers 33 73 IPR036236 -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 78 101 IPR013087 -
Bhi07g01218 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 205 235 IPR013087 -
Bhi07g01218 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 106 IPR013087 -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
Bhi07g01218 316 Pfam Zinc finger, C2H2 type 114 138 IPR013087 -
Bhi07g01218 316 Pfam Zinc finger, C2H2 type 21 41 IPR013087 -
Bhi07g01218 316 Pfam Zinc finger, C2H2 type 206 230 IPR013087 -
Bhi07g01218 316 Pfam Zinc finger, C2H2 type 47 71 IPR013087 -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 116 138 IPR013087 -
Bhi07g01218 316 SUPERFAMILY beta-beta-alpha zinc fingers 186 242 IPR036236 -
Bhi07g01218 316 Gene3D Classic Zinc Finger 205 234 - -
Bhi07g01218 316 SUPERFAMILY beta-beta-alpha zinc fingers 111 139 IPR036236 -
Bhi07g01218 316 Gene3D Classic Zinc Finger 48 74 - -
Bhi07g01218 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 73 IPR013087 -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 207 230 IPR013087 -
Bhi07g01218 316 Gene3D Classic Zinc Finger 102 174 - -
Bhi07g01218 316 PANTHER ZINC FINGER PROTEIN 11 305 - -
Bhi07g01218 316 ProSitePatterns Zinc finger C2H2 type domain signature. 238 262 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01218 Bhi-Chr7:38173725 Bhi11g01866 Bhi-Chr11:53238436 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1552 PF00096 zf-C2H2 2.60E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01218 K09191 - csv:101217595 604.364