Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01229 AAAAGAAAAGAAAAGAAAAAGAAGAAATGAAAGGAAAGCACCTTGTTGTTGTTGTTTGCTTGTTGAAGTTGAATTGAAATAAGAATAAAAATTGAAGATCCGGGAGAGATTGGGTAACAAAATCTGTAGGATCTTCCTTTCCAAACTGTCAAAAAAATCTTGTAAGGATTTCGCAAAATTATATCCCAATTCCCCATTCTAATCAGAATCAAAATGCTTTCTTTCTTCCCCATTTATAAACCCTTTATCCTTCCTCTTCTTCCCACCAGAATTCCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTGATTTTACTATTGAATTCCAATTCCCATGGCCCTTCTCTCCGCTGAGCCTCGATTTCATGTCTTGGCTGTTGATGACAGCCTCATTGATAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTTCTGGGTTTGGTTAGAGAAAGAAATGGAAGCAACCATTCTCCTATTTCCCCTGAAAATCATCATCATTATCATCATCATCATCATCAAGAGATTGAAGTTAATCTCATAATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAGCTTAAGCCTTTCATATGTAGAGGTAAAGACAAGGAGATGGATATCAACAATCTCAAGAGAAAGGAAATGGAAAAGAGCCAATCATCTGAGAGAACAAGAACAAAATACAATGAACTTTTCTGAACTTTTGCGGATGACCATTAATCATTATTACCAGATTTTCTAGAGTTAAATGACAATTATTATGGTTACAAGAGTCGCAGTCATTTTGAAATTTGTCTACTTGTACAAAGTTGATGAAAATTCAGATTTTTAGGCTTAGAAATCTCATTATTTTGTAGTTTAGACATGTGAACTCATGATTTGATCTCTACCAAACAAACAAAATAAGAGCATACATCACTTTTTTTCTTTCTTTTTATTTTCCAATTTTGGCTTTGGACCACTAATAAGATTGCTGAATGAATTTGGTCAA 1190 34.96 MALLSAEPRFHVLAVDDSLIDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSNHSPISPENHHHYHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKDKEMDINNLKRKEMEKSQSSERTRTKYNELF 188
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 38788168 38790095 + XM_039036773.1 Bhi07g01229 39618

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01229 188 SUPERFAMILY CheY-like 9 146 IPR011006 -
Bhi07g01229 188 SMART REC_2 10 150 IPR001789 GO:0000160
Bhi07g01229 188 MobiDBLite consensus disorder prediction 169 188 - -
Bhi07g01229 188 Pfam Response regulator receiver domain 76 146 IPR001789 GO:0000160
Bhi07g01229 188 ProSiteProfiles Response regulatory domain profile. 11 154 IPR001789 GO:0000160
Bhi07g01229 188 CDD REC_typeA_ARR 12 149 - -
Bhi07g01229 188 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 187 - -
Bhi07g01229 188 Gene3D - 11 185 - -
Bhi07g01229 188 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 187 IPR045279 GO:0009736
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01229 K14492 ARR-A; two-component response regulator ARR-A family - csv:101207245 286.189
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01229 Bhi-Chr7:38788168 Bhi11g02832 Bhi-Chr11:76257742 1.73E-72 dispersed
Bhi07g01229 Bhi-Chr7:38788168 Bhi02g00384 Bhi-Chr2:7450725 1.44E-53 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi04g00589 . 52 256 Response Regulator Gene Family AT3G16857 53.8 3.5e-54 210.7
Bhi12g01898 . 29 282 Response Regulator Gene Family AT4G31920 55.9 5.6e-72 269.6
Bhi01g01057 CCT,ECH 16 271 Response Regulator Gene Family AT4G31920 53.7 4.4e-69 260.0
Bhi09g02983 . 93 256 Response Regulator Gene Family AT1G67710 53.5 1.3e-39 161.8
Bhi01g01057 CCT,ECH 99 262 Response Regulator Gene Family AT1G67710 54.1 3.0e-39 160.6
Bhi02g00899 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi02g00900 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi02g00898 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi01g01057 CCT,ECH 18 291 Response Regulator Gene Family AT2G25180 55.6 8.2e-77 285.8
Bhi12g01898 . 29 286 Response Regulator Gene Family AT2G25180 58.6 1.8e-76 284.6
Bhi04g00589 . 11 256 Response Regulator Gene Family AT2G25180 55.6 1.4e-68 258.5
Bhi12g01899 CCT,ECH 1 174 Response Regulator Gene Family AT2G25180 52.0 5.2e-39 160.2
Bhi01g01057 CCT,ECH 79 309 Response Regulator Gene Family AT2G01760 51.3 5.2e-54 209.1
Bhi12g01898 . 90 323 Response Regulator Gene Family AT2G01760 51.4 1.2e-53 208.0
Bhi02g00899 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi02g00900 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi02g00898 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi04g00589 . 72 259 Response Regulator Gene Family AT2G01760 50.5 1.2e-47 188.0
Bhi04g00589 . 9 258 Response Regulator Gene Family AT5G58080 50.6 3.5e-62 237.3
Bhi12g01898 . 28 253 Response Regulator Gene Family AT4G16110 67.1 2.0e-79 294.7
Bhi01g01057 CCT,ECH 12 242 Response Regulator Gene Family AT4G16110 66.1 4.4e-79 293.5
Bhi09g02983 . 12 234 Response Regulator Gene Family AT4G16110 61.5 1.3e-62 238.8
Bhi04g00589 . 10 235 Response Regulator Gene Family AT4G16110 54.1 3.2e-58 224.2
Bhi02g00899 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi02g00900 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi02g00898 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi12g01899 CCT,ECH 1 141 Response Regulator Gene Family AT4G16110 57.0 2.0e-36 151.8
Bhi02g00384 . 21 187 Response Regulator Gene Family AT3G48100 67.5 2.5e-53 206.1
Bhi07g01667 . 29 162 Response Regulator Gene Family AT3G48100 71.6 1.5e-50 196.8
Bhi07g01668 . 29 190 Response Regulator Gene Family AT3G48100 59.3 5.1e-46 181.8
Bhi12g01132 . 11 152 Response Regulator Gene Family AT3G48100 62.7 1.0e-41 167.5
Bhi03g02471 CCT 10 161 Response Regulator Gene Family AT3G48100 56.6 1.9e-40 163.3
Bhi11g02832 CCT 3 153 Response Regulator Gene Family AT3G48100 55.6 2.1e-39 159.8
Bhi07g01229 . 4 172 Response Regulator Gene Family AT3G48100 50.3 4.7e-39 158.7
Bhi07g00448 . 18 149 Response Regulator Gene Family AT3G48100 59.1 1.1e-37 154.1
Bhi07g01667 . 1 175 Response Regulator Gene Family AT1G59940 65.4 5.1e-57 219.2
Bhi07g01668 . 1 203 Response Regulator Gene Family AT1G59940 56.5 1.7e-52 204.1
Bhi02g00384 . 16 178 Response Regulator Gene Family AT1G59940 60.7 1.6e-47 187.6
Bhi12g01132 . 5 153 Response Regulator Gene Family AT1G59940 58.4 3.3e-40 163.3
Bhi11g02832 CCT 10 153 Response Regulator Gene Family AT1G59940 57.6 2.1e-39 160.6
Bhi07g01229 . 11 155 Response Regulator Gene Family AT1G59940 58.6 6.2e-39 159.1
Bhi03g02471 CCT 11 154 Response Regulator Gene Family AT1G59940 56.3 1.4e-38 157.9
Bhi07g00448 . 16 148 Response Regulator Gene Family AT1G59940 62.4 1.4e-38 157.9
Bhi07g01667 . 16 191 Response Regulator Gene Family AT1G10470 66.5 5.6e-56 215.3
Bhi07g01668 . 16 219 Response Regulator Gene Family AT1G10470 56.9 1.9e-51 200.3
Bhi02g00384 . 25 171 Response Regulator Gene Family AT1G10470 64.7 8.9e-46 181.4
Bhi12g01132 . 11 158 Response Regulator Gene Family AT1G10470 59.5 7.3e-40 161.8
Bhi11g02832 CCT 10 153 Response Regulator Gene Family AT1G10470 58.3 9.6e-40 161.4
Bhi03g02471 CCT 17 154 Response Regulator Gene Family AT1G10470 59.4 4.0e-38 156.0
Bhi07g01229 . 11 176 Response Regulator Gene Family AT1G10470 54.8 4.0e-38 156.0
Bhi07g00448 . 18 148 Response Regulator Gene Family AT1G10470 62.6 6.9e-38 155.2
Bhi02g00384 . 21 187 Response Regulator Gene Family AT3G48100 67.5 2.5e-53 206.1
Bhi07g01667 . 29 162 Response Regulator Gene Family AT3G48100 71.6 1.5e-50 196.8
Bhi07g01668 . 29 190 Response Regulator Gene Family AT3G48100 59.3 5.1e-46 181.8
Bhi12g01132 . 11 152 Response Regulator Gene Family AT3G48100 62.7 1.0e-41 167.5
Bhi03g02471 CCT 10 161 Response Regulator Gene Family AT3G48100 56.6 1.9e-40 163.3
Bhi11g02832 CCT 3 153 Response Regulator Gene Family AT3G48100 55.6 2.1e-39 159.8
Bhi07g01229 . 4 172 Response Regulator Gene Family AT3G48100 50.3 4.7e-39 158.7
Bhi07g00448 . 18 149 Response Regulator Gene Family AT3G48100 59.1 1.1e-37 154.1
Bhi02g00384 . 26 167 Response Regulator Gene Family AT5G62920 75.5 1.8e-51 199.9
Bhi07g01667 . 11 175 Response Regulator Gene Family AT5G62920 63.6 2.3e-49 193.0
Bhi07g01668 . 11 203 Response Regulator Gene Family AT5G62920 54.4 7.5e-45 177.9
Bhi12g01132 . 11 152 Response Regulator Gene Family AT5G62920 62.0 5.0e-41 165.2
Bhi03g02471 CCT 12 156 Response Regulator Gene Family AT5G62920 57.2 1.6e-39 160.2
Bhi11g02832 CCT 10 153 Response Regulator Gene Family AT5G62920 56.3 4.7e-39 158.7
Bhi07g01229 . 11 172 Response Regulator Gene Family AT5G62920 51.2 1.5e-37 153.7
Bhi02g00384 . 33 166 Response Regulator Gene Family AT1G19050 74.6 3.3e-49 192.6
Bhi07g01667 . 24 185 Response Regulator Gene Family AT1G19050 59.0 1.4e-44 177.2
Bhi12g01132 . 3 155 Response Regulator Gene Family AT1G19050 53.6 5.2e-39 158.7
Bhi07g01229 . 8 177 Response Regulator Gene Family AT1G19050 51.7 5.2e-39 158.7
Bhi03g02471 CCT 11 156 Response Regulator Gene Family AT1G19050 54.8 4.4e-38 155.6
Bhi11g02832 CCT 8 158 Response Regulator Gene Family AT1G19050 53.0 4.4e-38 155.6
Bhi07g00448 . 18 149 Response Regulator Gene Family AT1G19050 59.8 1.4e-36 150.6
Bhi11g02832 CCT 1 159 Response Regulator Gene Family AT2G41310 73.6 8.4e-59 224.6
Bhi03g02471 CCT 8 269 Response Regulator Gene Family AT2G41310 50.2 1.6e-57 220.3
Bhi12g01132 . 1 154 Response Regulator Gene Family AT2G41310 64.9 3.2e-50 196.1
Bhi04g01903 . 5 156 Response Regulator Gene Family AT2G41310 59.1 1.1e-42 171.0
Bhi07g01668 . 25 186 Response Regulator Gene Family AT2G41310 53.7 1.6e-41 167.2
Bhi04g01902 . 5 157 Response Regulator Gene Family AT2G41310 58.7 2.7e-41 166.4
Bhi07g01667 . 25 158 Response Regulator Gene Family AT2G41310 58.2 2.7e-41 166.4
Bhi02g00384 . 32 163 Response Regulator Gene Family AT2G41310 62.6 1.0e-40 164.5
Bhi07g00448 . 18 149 Response Regulator Gene Family AT2G41310 58.8 2.3e-40 163.3
Bhi03g02471 CCT 8 269 Response Regulator Gene Family AT3G57040 52.5 2.2e-62 236.5
Bhi11g02832 CCT 1 157 Response Regulator Gene Family AT3G57040 77.7 1.6e-60 230.3
Bhi12g01132 . 8 154 Response Regulator Gene Family AT3G57040 68.7 1.5e-50 197.2
Bhi07g01229 . 4 178 Response Regulator Gene Family AT3G57040 61.0 1.3e-49 194.1
Bhi04g01903 . 9 178 Response Regulator Gene Family AT3G57040 56.7 7.2e-45 178.3
Bhi04g01902 . 9 179 Response Regulator Gene Family AT3G57040 56.4 1.8e-43 173.7
Bhi07g01667 . 25 158 Response Regulator Gene Family AT3G57040 58.7 8.8e-43 171.4
Bhi07g01668 . 25 186 Response Regulator Gene Family AT3G57040 54.3 3.4e-42 169.5
Bhi02g00384 . 32 163 Response Regulator Gene Family AT3G57040 63.1 3.7e-41 166.0
Bhi07g00448 . 16 149 Response Regulator Gene Family AT3G57040 58.6 3.5e-39 159.5
Bhi02g00384 . 17 186 Response Regulator Gene Family AT1G74890 66.1 7.0e-52 201.4
Bhi07g01667 . 25 187 Response Regulator Gene Family AT1G74890 61.8 8.9e-47 184.5
Bhi07g01668 . 25 215 Response Regulator Gene Family AT1G74890 52.8 1.7e-42 170.2
Bhi07g01229 . 5 160 Response Regulator Gene Family AT1G74890 55.8 4.7e-40 162.2
Bhi12g01132 . 11 147 Response Regulator Gene Family AT1G74890 59.9 5.2e-39 158.7
Bhi03g02471 CCT 12 149 Response Regulator Gene Family AT1G74890 58.7 1.5e-38 157.1
Bhi11g02832 CCT 8 153 Response Regulator Gene Family AT1G74890 54.8 2.0e-38 156.8
Bhi07g00448 . 2 145 Response Regulator Gene Family AT1G74890 59.7 7.5e-38 154.8
Bhi07g00448 . 18 150 Response Regulator Gene Family AT2G40670 72.4 4.9e-48 188.3
Bhi11g02832 CCT 6 155 Response Regulator Gene Family AT2G40670 55.6 6.5e-40 161.4
Bhi07g01667 . 26 159 Response Regulator Gene Family AT2G40670 55.5 2.5e-39 159.5
Bhi02g00384 . 33 164 Response Regulator Gene Family AT2G40670 59.3 3.0e-37 152.5
Bhi03g02471 CCT 13 156 Response Regulator Gene Family AT2G40670 51.7 1.1e-36 150.6
Bhi07g00448 . 18 150 Response Regulator Gene Family AT3G56380 73.1 4.6e-48 188.3
Bhi07g01667 . 26 159 Response Regulator Gene Family AT3G56380 55.6 1.2e-40 163.7
Bhi02g00384 . 26 164 Response Regulator Gene Family AT3G56380 58.7 7.9e-40 161.0
Bhi11g02832 CCT 6 155 Response Regulator Gene Family AT3G56380 53.6 8.7e-39 157.5
Bhi12g01132 . 11 155 Response Regulator Gene Family AT3G56380 54.8 4.3e-38 155.2
Bhi07g01229 . 3 150 Response Regulator Gene Family AT3G56380 55.7 1.1e-36 150.6
Bhi04g00589 . 52 256 Response Regulator Gene Family AT3G16857 53.8 3.5e-54 210.7
Bhi12g01898 . 28 253 Response Regulator Gene Family AT4G16110 67.1 2.0e-79 294.7
Bhi01g01057 CCT,ECH 12 242 Response Regulator Gene Family AT4G16110 66.1 4.4e-79 293.5
Bhi09g02983 . 12 234 Response Regulator Gene Family AT4G16110 61.5 1.3e-62 238.8
Bhi04g00589 . 10 235 Response Regulator Gene Family AT4G16110 54.1 3.2e-58 224.2
Bhi02g00899 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi02g00900 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi02g00898 . 17 249 Response Regulator Gene Family AT4G16110 53.8 1.0e-56 219.2
Bhi12g01899 CCT,ECH 1 141 Response Regulator Gene Family AT4G16110 57.0 2.0e-36 151.8
Bhi12g01898 . 29 282 Response Regulator Gene Family AT4G31920 55.9 5.6e-72 269.6
Bhi01g01057 CCT,ECH 16 271 Response Regulator Gene Family AT4G31920 53.7 4.4e-69 260.0
Bhi09g02983 . 93 256 Response Regulator Gene Family AT1G67710 53.5 1.3e-39 161.8
Bhi01g01057 CCT,ECH 99 262 Response Regulator Gene Family AT1G67710 54.1 3.0e-39 160.6
Bhi02g00899 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi02g00900 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi02g00898 . 16 390 Response Regulator Gene Family AT2G25180 56.2 1.3e-103 374.8
Bhi01g01057 CCT,ECH 18 291 Response Regulator Gene Family AT2G25180 55.6 8.2e-77 285.8
Bhi12g01898 . 29 286 Response Regulator Gene Family AT2G25180 58.6 1.8e-76 284.6
Bhi04g00589 . 11 256 Response Regulator Gene Family AT2G25180 55.6 1.4e-68 258.5
Bhi12g01899 CCT,ECH 1 174 Response Regulator Gene Family AT2G25180 52.0 5.2e-39 160.2
Bhi01g01057 CCT,ECH 79 309 Response Regulator Gene Family AT2G01760 51.3 5.2e-54 209.1
Bhi12g01898 . 90 323 Response Regulator Gene Family AT2G01760 51.4 1.2e-53 208.0
Bhi02g00899 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi02g00900 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi02g00898 . 79 303 Response Regulator Gene Family AT2G01760 52.4 6.5e-49 192.2
Bhi04g00589 . 72 259 Response Regulator Gene Family AT2G01760 50.5 1.2e-47 188.0
Bhi04g00589 . 9 258 Response Regulator Gene Family AT5G58080 50.6 3.5e-62 237.3
Bhi08g01139 . 6 553 Response Regulator Gene Family AT5G61380 51.1 4.9e-141 499.2
Bhi03g01649 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01648 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01652 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01651 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01655 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01654 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01653 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01656 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi03g01650 . 38 205 Response Regulator Gene Family AT5G60100 69.0 7.9e-55 212.2
Bhi12g00702 . 48 185 Response Regulator Gene Family AT5G60100 61.6 3.3e-45 180.3
Bhi12g00701 . 48 185 Response Regulator Gene Family AT5G60100 61.6 3.3e-45 180.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000219 2 6 2 4 4 5 9 5 5 3 5 5 8 5 5 8 5 6 7 5 5 5 6 6 6 5 4 13 7 2 163
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1555 PF00072 Response_reg 6.40E-16 CL0304 Bhi TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g01229 Bhi_Chr07 FPKM 1.099375 0.990924 1.929223 1.876766 1.914891 1.457354 2.220538 0.0811 0.034365 0.144825