Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01255 GAAATAGCCGGCACAAAAGGATGTTTTTCTCAAATTTTTTGAGTTTTTCTTTTTCACTGTAGATTGTTCTGAAGAAACCGCATGGAGTTGCTCTCTGTCTGCGCATAATACTCTCTCATTGTTCATGGCGAAAAAGAAAATGGGGGCTTAGGTTTCTCTTTTACTTTATATTTCAAGCGAGAGAGAGAGATGGAATGAACTAGAAGCAAGTTGGGCAGATTTTAATGGCGGCCAAAACGTGTCCTGAGAAACGACATGGGTTGCTTTCTTTGGAGAGGTGAAAGTTGTTGGGTTCTTAGCGGCTCCATTGGCTGCTATCAATCTGTCTCAGTTCTTGATACAGACTGGTTCTTTGATGATCGTGGGTCATCTCGATGAACTCTCTCTCTCCAGCACAGCCATAGCCGTCTCTTTAGCTGCTGTTACAGGATTCAGTGTGATTATAGGTATGGGTACTGCCCTTGAAACTCTATGTGGGCAAGCTTATGGGGCTGGACAATATCAAAAATTTAGAAATCATATTTACACTGCTATATTTTGTCTGCTAGTAGTTTGCCTCCCTATTACTCTGTTATGGATCAACATGGGGAAGCTACTTGTTTTGATTGGCCAAGATCCTTTGATATCACGTGAAGCTGGGAACTTCATGATTTGGCTTATTCCTGGGCTCATTGCTTATGCATTTCTGCAACCACTAATGAAATATTTTCAGATGCAAGTTTTTGTGATTCCCATGCTCATATTTAGTTGGGTCACCTTTTGTCTGCACATACCCCTCTGTTGGGTTTTGGTGTTTAAAGCAGGACTCAAAAACCTCGGTGGAGCTTTAGCCATGAGTATTTCATATTGGTTGAATGTGATTTTTCTTGCGTTATATATGAATTTTTCTCCCAAGTGTGCAAAAACTCGTGGTGTAATTTCTATGGAACTGTTCAAAGGAATTAGGGTCTTCCTTCACTTTGCTATCCCTTCTGCAGTAATGACTTGCCTTAGTTGGTGGTCGTTTGAGCTGATTATCTTACTGTCTGGACTTCTACCAAATCCAGAGCTTGAATCTTCAGTTCTATCTGTTTGTTTCAATACCTTGACAACGGTATTTACATTAGCATGTGGGATCGGCAGTGCAGGCAGTACCAGAGTTTCAAATGAGCTAGGAGCTGGGAATCCACAAGCTGCTCGTTTAGCTGCTGGGGCAGCAATATTTCTTGCAATTGTGGGGATCATCATAGTGAGCATGGTTCTCTTCACTCTTCGTTATGTTTTCGGTTATGCTTTCAGCAGTGAAAAGGAAGTTGTAGATTATGTTGCTATCATGGCTCCCTTAGTTTGTATATCAATCATATTGGATGCCATTCAAGGGGTCCTTTCAGGTATTGCAAGAGGATGTGGCTGGCAGCGTATAGTGGCTTATATGAACTTAGCGGCTTTCTATCTCTGTGGAAATCCAGCTGCTGTAGCACTTGGTTTCTGGGCAAATATGAGAGGGAAGGGCCTGTGGATTGGCATCCAAATCGGAGCTTTCGTGCAGACACTTCTACTTGCCATTGTCATGAGCCATGTTAATTGGAAAAACCAGGCAGATGAAGCAAGGGAGAGGATCTTTGAAGGATGAGCTCAGTAAATAAATATGAGGAACACAGTGTTTGACTGGGGATTGTCTTCTGTGCAGTTGTGACCAACCATTAAAGTTGAGATATCAGAAGAGAGTATCTGATGCAAAAAGCCACAGCCATTGGGTACTTCTCGAGTTTCTCTCTTCTTTGTAGTTAAAAAATACTTTTGGTCCCTCATCTTCATGGATTTAGTTCTTTGTACTTTCAGTTCTATAACAATTATTGTATTTTATAAAAA 1851 41.27 MIVGHLDELSLSSTAIAVSLAAVTGFSVIIGMGTALETLCGQAYGAGQYQKFRNHIYTAIFCLLVVCLPITLLWINMGKLLVLIGQDPLISREAGNFMIWLIPGLIAYAFLQPLMKYFQMQVFVIPMLIFSWVTFCLHIPLCWVLVFKAGLKNLGGALAMSISYWLNVIFLALYMNFSPKCAKTRGVISMELFKGIRVFLHFAIPSAVMTCLSWWSFELIILLSGLLPNPELESSVLSVCFNTLTTVFTLACGIGSAGSTRVSNELGAGNPQAARLAAGAAIFLAIVGIIIVSMVLFTLRYVFGYAFSSEKEVVDYVAIMAPLVCISIILDAIQGVLSGIARGCGWQRIVAYMNLAAFYLCGNPAAVALGFWANMRGKGLWIGIQIGAFVQTLLLAIVMSHVNWKNQADEARERIFEG 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 39224018 39228367 + XM_039035865.1 Bhi07g01255 39644

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01255 418 Pfam MatE 205 364 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bhi07g01255 418 Pfam MatE 1 144 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bhi07g01255 418 TIGRFAM matE: MATE efflux family protein 1 381 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bhi07g01255 418 CDD MATE_eukaryotic 1 408 IPR045069 GO:0042910|GO:1990961
Bhi07g01255 418 PANTHER PROTEIN DETOXIFICATION 14 1 409 - -
Bhi07g01255 418 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 409 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01255 K03327 TC.MATE, SLC47A, norM, mdtK, dinF; multidrug resistance protein, MATE family - csv:101208050 699.123
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01253 Bhi-Chr7:39224018 Bhi07g01255 Bhi-Chr7:39224018 0 dispersed
Bhi07g01255 Bhi-Chr7:39224018 Bhi02g00114 Bhi-Chr2:2094211 3.90E-144 dispersed
Bhi07g01254 Bhi-Chr7:39224018 Bhi07g01255 Bhi-Chr7:39224018 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g385 . . . . . . . . . . . . . . . . . Bhi07g01255 . . . Hepe01g1150 . . . . . . . . . . Cone19ag0795 . . Lsi04g00208 Csa05g02659 . Cme10g00212 . . . . . . . . . . . . . . . . Cpe04g01386 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001043 2 6 4 2 3 1 0 1 1 2 0 1 2 3 3 2 1 3 3 1 3 1 4 6 6 3 3 7 5 3 82