Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01296 TCTTCTTCAAACAACAATTTTGTTCAGTTAAACAAATATATTTTTGACATTTGAGTTTTCATAAAATCAATGATTTAGTTGTAAATTTTGATTTGTAACAATTGAGTCCAAAAAAATTCAAAATTATAGGTTGTATTTGGTAATTTTTTGTTTTGGTTTTTGAAAATTAAGCATATTTCTTCCCCATTTCTTATAATATTTGCATTTTTGTTAGGTACAGTAGTTAAATTTTTAGTCAAATGTCAAAACAAAAGTTACTTTTTTTAGTTTTTAAAATTTGACTTGGATTTTTAAATAATTGGTAAAAAACGTAGATAATAAAGGAATAAATTCGGAGGTGAAAGCAATATCTATAGACTTAAATTTCAAAAACACAAACAAAAAAACAAAATTGTTACAAAACGGGAGATTAATAATTGTTACAAAACGAGAGATTAATAATTTAGTTATAATACAAGAACTAAATAAATAATTATTAAAGTAGATGAAATAAGATGTTATAAATATAAAAATATATAGATTTAGTTGTTACATGTTAAAGTTTGCGGGAGAAAATGGTTACTAAGCTCAAGGAAAATCATTACTCTAAAAAGTTTAATCTAAATTGGTTTAAAACAGTAATGATAATAATTGAAGTTTCATTTAATCGTTATTTAATTTTGACTTAAAAGTTTTTAAAATTAAATTTAAAATACTACCACCACATTTTATTTAAGAATTTAAATATTAGGTCCAATGGATGGATGAGAGGTGGACGTAGTGGAACGAAATTTTGCATACTTTTGAAATTTGAGATCTTGTTAACATTTTATTTATATGATATTCGTGTGAAATTACTAAAATAGGCTTTCTGTTGTCGTTCTCCAAGCTCTCTATTTCTCGTGTCTCACTCTCTCGATGGGCGATGCCTAACTTCGATCTCCCCTCATTTTTACAATATTTTGATGGCAACACCTTTGCAATGTTCTGATGGGTGACAACAAATGGAGAAAGAGAAAAAAAGAATGATGGAAGAGAAATCGAGAAAAGGAGTAAGAAGAAGAGTGAAAAAGAAAATTAAGAGTAATTTTGTAAGGTAAAAACTGATTTTTAAAATTAGGTCTATTATACAATTATATTTTAAAATATTCCAATAGATAGCACATTTCAATCAACACGAAAACACTCTGGAATATATTTAATATACATATCTGAGGCGGGAATTTGTGAATCGCTCACCGCCGTGCAAGCCATCGCTTCATCTGAAACTCGAGCAATTTCTTCGTCGGCGATGATTATTAAAGCTTCACAGACGCGTACTATTCGTCCTCTGTTTTTCTGCAACCAATTTCTGACTTTATCGTGCCGTCGGTTCATCTCGGGCGAAGACTTCTGACCATAGAGATCGAAATTTCTAGGGTTTGGATAGCCTTATGCTACAAATGACGAAACCTTCATTTAATTATGGCCTCAGTTTTGACTGTTCAAATAGAGTTTATGAAGAGTCAAAGAGTCAAGTCTATGTAATGGCTGGTCAATTGGGCGTAAATTGGATCTCTCCAATTCATCGACCCGTATTTTCCCCATAGACTGCGTTGTAAATTTCTGGAGGATGCCCCCACCTTGATTTTTATTCTATTCCCGTTCAGTTTCTTCGAGATTTCCGTACCTGACTGGAAACCCTAGAAATCATAAACAACTCGGAGAGGTAGATTTGAGGTAGATTTGGGGATCGAGGTAGATTTATGAATACCGAATTCCATATGGGGTTATTCTGTTTCGTTTTGTCATTTCTTCTCGCTCAGCTAGTTGAACTTTCGTTGGCTATGAATGATAGCAGTTACGTTCATCCATTTTGCCCGTCCTTCGAATGTGGAAATCTGGGCCTCATAAGATTCCCCTTTAACAACATGTCGCTCACTGGTTGCGGATTATACACTGTTAACTGCTCAGGACAGCCAAAAATCCAGCTGAGACGTGAAGAAGAACTATGGTTTGATGTTGTTGCCATATCTCAAGCTAATGTCATCCATATCAATGATTCAGAACTAAAGAAGCGAATAAATTCTCGCAATTGTTCTATTATAGACGATCTGGCTCTTCCAGCCTCTCCTTCGTCTTCTTTATCCACAGATAATAATCTTACTTTGTATAATTGCACAGATAAACCTAAAGATGCTATTCCTCTTTTCATAAGTTCATTTAGTTGCTCTGGTTATTACACATACCTCGACCCAAATATTCCACCACCCAAGTGTCCCTCTTCCCAGTCTAAAATTTTTGTTCCAGTTCGCCCGGTTGGTGCTAATAACTCAGCTGTTGAGTTTACTTCTGATTTCCAACTTCAAGTGACCGTATCCACTCCTTGTCATCAATGTTTTTATAGAGGAGGCCAATGCTCGGATTCCCAGGGATACTTCGTTTGTAAAGATGGAAACACAAAAACAAGAAAAGATAAGCACAGGAATTTGTGGATAGCACTAGGTGTTGCATTCTCAGTTGTAATTCTGCTTTTGTTGTTATTTGCTCTTTGGTACCGTAGAAGAAGGCATGCTGCTCCAAATATCCTAACAAGGAATATATCTTGTGAACCCTACTCAAAATTCGACTTGGATGATGGTGGTGGTGTGTGCTTTGAAGTCCCTGTTTTCTCATATGTCGAACTCGAAGCGGCAACTAACAAGTTTGATCGTGATAAAGAACTTGGAGATGGTGGTTTTGGAACCGTGTATCACGGCAAACTCCACGATGGCCGGGAAGTTGCTGTGAAACGCCTTTATCAACATAACTATAGACGAGTAGAGCAATTCATGAATGAGGTTAAAATTCTCACCCGCCTTCGCCATAAAAATCTTGTCTCCCTTTATGGATGTACTTCAAGACGCAGTCGTGAACTTCTCCTTGTTTATGAATTTGTCCCAAATGGTACTGTTGCTGATCATCTCCATGGAGAACAAGCAAGTCCTAGCTTGCTCACGTGGCCTATACGGATGAACATTGCCATTGAAACAGCAAGTGCTTTAGTTTATCTCCATGCTTCGGATATCATTCATCGTGATGTGAAGACTACTAACATTCTCTTAGACAACAATTTTTCTGTCAAAGTTGCTGATTTTGGGATCTCTAGATTATTCCCAAACCATGTTAGTCATGTCTCAACTGCTCCTCAAGGGACCCCTGGTTATGTGGATCCCGAGTATTACCAGTGTTATCAGCTTACGACCAAGAGTGATGTTTATAGTTTTGGTGTCGTATTAATCGAGCTTATATCGTCAATGCCAGCTGTTGATATAACAAGGCATCGGCATGAGATTAACTTGTCTAACTTAGCTGTGAACAAAATTCTAAGACAGGAAATTGATGAGCTGATCGATCCTTGCCTCGGGTATCAATCGGATGAAAATGTTCGGCGGATGATAATGGCCATGGCTTGGCTAGCTTTTCTTTGTCTGCAGCAAGACAAGGAAAGAAGACCTACAATGGAAGAAGCGCTGGAAACTTTGAAGAGGATTGAGAGTGGGGAAGAAAGTGAGAATTTGCAGGATAATAGTGCACTGTTGAAAAGCTTTGATCCATCTCCTTCTCCAGAGTATGATGAGATTGAGTTGTTGAAAAACAAGAGGCAGCAGTTGTCCCCTACTTCTGTTGCTGATAAATGGATCAGCTCAACTTCATTTGTTAGTGCTTCAACTTCAATATCATCCATCTCCTAATTCTTTTTTTCTTTTCTTTTTTGTTTTAATGATAGAAGTTCAGAATCAGATTATGAGAGTTTAGGAAAGAAATAAATCACTTGGCTTCTTTTAAAATACATATATATATAAATAAATGTTATATGTCTGAATGATTTTTTTTTTTTTTTTGTAATTACATACAGGATAGGGAATGTAAACATGAATGGTTGAAAGTTACTCAGCTCTAGAAAGAGAAACATTTTTATACTTTTTTTTTCTTTGGGCTTTTACTTTTTTGGGCCTGGTAGCCCAATGATAAGAATGAAGCATTGACCACAACTTTGTGTTCAGTGGATGCAAAA 4015 35.64 MNTEFHMGLFCFVLSFLLAQLVELSLAMNDSSYVHPFCPSFECGNLGLIRFPFNNMSLTGCGLYTVNCSGQPKIQLRREEELWFDVVAISQANVIHINDSELKKRINSRNCSIIDDLALPASPSSSLSTDNNLTLYNCTDKPKDAIPLFISSFSCSGYYTYLDPNIPPPKCPSSQSKIFVPVRPVGANNSAVEFTSDFQLQVTVSTPCHQCFYRGGQCSDSQGYFVCKDGNTKTRKDKHRNLWIALGVAFSVVILLLLLFALWYRRRRHAAPNILTRNISCEPYSKFDLDDGGGVCFEVPVFSYVELEAATNKFDRDKELGDGGFGTVYHGKLHDGREVAVKRLYQHNYRRVEQFMNEVKILTRLRHKNLVSLYGCTSRRSRELLLVYEFVPNGTVADHLHGEQASPSLLTWPIRMNIAIETASALVYLHASDIIHRDVKTTNILLDNNFSVKVADFGISRLFPNHVSHVSTAPQGTPGYVDPEYYQCYQLTTKSDVYSFGVVLIELISSMPAVDITRHRHEINLSNLAVNKILRQEIDELIDPCLGYQSDENVRRMIMAMAWLAFLCLQQDKERRPTMEEALETLKRIESGEESENLQDNSALLKSFDPSPSPEYDEIELLKNKRQQLSPTSVADKWISSTSFVSASTSISSIS 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 39846396 39851151 + XM_039036307.1 Bhi07g01296 39685

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01296 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Bhi07g01296 655 Gene3D Phosphorylase Kinase; domain 1 293 390 - -
Bhi07g01296 655 MobiDBLite consensus disorder prediction 591 616 - -
Bhi07g01296 655 CDD STKc_IRAK 320 589 - -
Bhi07g01296 655 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi07g01296 655 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 640 IPR044652 -
Bhi07g01296 655 SUPERFAMILY Protein kinase-like (PK-like) 299 613 IPR011009 -
Bhi07g01296 655 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Bhi07g01296 655 Gene3D Transferase(Phosphotransferase) domain 1 391 610 - -
Bhi07g01296 655 SMART serkin_6 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi07g01296 655 Pfam Protein kinase domain 315 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi07g01296 655 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 640 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01296 - - - bhj:120081441 1270.37
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01294 Bhi-Chr7:39843756 Bhi07g01296 Bhi-Chr7:39846396 0 dispersed
Bhi07g01296 Bhi-Chr7:39846396 Bhi08g01255 Bhi-Chr8:38656870 2.06E-162 dispersed
Bhi07g01295 Bhi-Chr7:39844378 Bhi07g01296 Bhi-Chr7:39846396 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g347 . . . . . . . . . Cmo18g01013 . Cma18g01002 . Car18g00924 . . . Bhi07g01296 . . . . . . Cla05g02281 . . . . . . . . . . Lsi04g00234 Csa05g02634 . Cme10g00237 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007318 0 3 0 0 0 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 2 1 0 30
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87893 PF00069 Pkinase 1.50E-49 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g01296 Bhi_Chr07 FPKM 0.413248 0.50634 18.631235 16.478956 16.38624 17.653921 15.931329 0.599659 0.794814 0.524062