Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01299 ATGTTAACCACGATTACGCCCATTCATAATACCCACGGTTGTGGAGCTGTTGCCGCTATGGCTGCTGCTTCTCCGGTGAACTCCTCAATGGAATCATCTTCCACAATCGTCGCCTTGGAATCTCCTATTCTCATCTTTCTCTTCTTTCACAAGGCTATACGTGCCGAGCTTGATCACTTCCATCGCGACGCCATCGAATTCGCTACTAACCACCAAACTGCTGGGGATATTCGGCCGTTGTTGCAGCGCTATCACTTCCTTCGAGCTGTTTATAAGCATCACTGCAACGCTGAGGACGAGGTCATCTTCCCGGCGCTAGATCTACGAGTGAAAAATGTGGCTACTACTTATTTCCTTGAACATGAAGGTGAAAGTGTTCTGTTTTGCCAATTGTTCGAGCTTCTGAATTCAAATGCGTGGGAAGAAGGGAGCTATAAGAGGGAGTTGGCATCTCGTGTCAGAGCTCTTCAGATATCAATATGCCAACATATGTTCAAGGAAGAGGAACAGGTATTCCCATTACTTACCGAGAAGTTTTCTTTTGAAGAACAGGCAGCACTGGTATGGAAATTTCTTTGTAGTATACCTATTAATATGCTGGAAGTCTTTCTTCCGTGGCTTTCTTCCTCTATATCTCCAGATGAGCATCAGATTATGTGCAAATGCTTGAGCAAAATTATCCCTGAGCAAAAGCTTCTTCAGAAGATAATATTTTCCTGGATGGAGGGTGCAAGAAAGGCTCGTGCCAACCAAAGTTCGTATGACGACAGTTTAGAGTTTCAATGTCTAGGCTTTCAGGTCCATGATCTTATATGTATGCCAGAGAAGGGGAATGACACTTCTGAATCAACGAGAATTGGTAAAAGGAAATACGTGGAGCAAAGTAATTTTACCTATTCTACTGTTTCAGATGCTTGCCCCATCAATGAAATATTACATTGGCATAATGCTATAAAAAAAGAACTAAATAGCATCGCTGAGGCAGCTAGGGACCTAAATTTTTCTGAATTTTCTGAGTTGTCTGCACTTAAGGAGAGGCTGCAGTTTATTGCAGAAGTCTGCATCTTCCACTGCATTGCTGAGGATAAAGTTATATTCCCTGCTGTAGATGCTGAACTATCTTTTGCCGATCAGCATGCAGAAGAAGAGATTCAATTTGATAAGCTTAGGATCTTGATAGAAAGTATCCAAGCTGATCAAGCTAAATATTCTTCTGCTGAAATTAATAAAAAGTTAAGTTCTCATGCCGATCAAATTATCAAGACCATCCAGAAGCACTTCCATGATGAGGAAATGCATGTTCTTCCACTTGCTCGCAAGCATTTTGGACCCCAAAGGCAGCGAGAACTTCTGTATCACAGCTTATGCATAATGCCCCTGAAATGGATAGAACGAGTTTTACCTTGGTTAGTAGAAACACTTAATGAAGAAGAAGCAAGATCTTTTCTTCAGAATATGCAAATGGCAGCTCCAGTGTCGGATCATGCACTCGTTACACTATTTTCTGGTTGGGCATGCAAAGGCCATCCCAGGAGCATTTGTTTTTCTGCAAGTGCTATCGACCGTTGTCCTGAACGGATATTGACTGGAGATGAAGAATCATGCTCCTCCTTTTGTTCTGCCAGTGCAAAACATTCATGCAATCTGGCAACTGAGTGTGCCAGGTCATCCAAGGGTGGGAACGCAGTATGTAATGGAGACTTAAATGGCTGTCTTCCTTCGAAAAACCCAAGCAAAAAACTTCACTTGACTCGTGTAAAACAATCTCCTTGTGTCCCTGGGTTAGGAGTGGATCATGACAATAATTTAGGAATGAGATCTATGGCAGCAGCGAAATCACTGCGTTCTTTGTGTTTTCGTCTCTATGCTCCTTCTCTCAACTCCAGTCTTTTTAGTCTGGAAACTGATCCAATCTCTCGTGGCAGTGGTTCTAAGTCCCGACCTATTGATAACATATTTAAATTTCATAAAGCAATAAGCAAAGACTTGGAGTATTTGGATAATGAATCTGTAAATCTTGGTGCTTGCAATGATACTTTCTTTAGGCAATTTTGCGGTAGGTTTTATCTGTTGTGGGGCCTATATAAAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCGGCATTGGAATCAAAAGAAGCTCTTCATAATGTGAGCCACTCTTATACATTAGACCACAAACAGGAGGAAGAGCTATTTGAAGGTATTTCTAGTGCACTTTCTAAGCTGACAGACATTCGCAGAGACTTGAAAGGGAAGAAAAAGTGTAACGCTTCAAGTGGGATGGAGTCTCATACCTCTGATTGTTGTGATACTGTGAGAATGAATATTGAGCTGGCAACAAAGCTCCAGGGCATGTGCCGATCAATTAGAGTAACACTTGGTCAACATATTTTCCGTGAGGAATCAGAATTGTTGCCGTTGTTCCATACATATTTTTCTGTGGAAGAACAGGATAAAATTGTTGGTAGAATAATTGGTACTACAGGTGCTGAGGTCCTTCAATCAATGTTGCCTTGGGTAACTTCTGCACTTACACAGGACGAGCAAAATAAGATGATGGATACATTGAAGCAGGCAACCAGAAACACAATGTTTAGTGACTGGCTAAATGAATGGTGGGAAGGACCTGCTACATCTCCACATCATGTGGAATCTGTCATTCATTTATCTGGAGGTTCTGATTCCCATGACATCTGTGACCAACAAAATGATTCGGTTTTCAAGCCGGGATGGAAAGAGATTTTTAGGATGAACGAAAATGAACTTGAATCAGAAATACGAAAGGTTGCCCAGGATTCAACCATTGACCCTAGGAGAAAAGATTATCTTATTCAGAACTTGATGACCAGTCGCTGGATAGCTTCTCAGCAAATGCTACCCCAAGCTACTACAGGCGAAACCTCAGATGCAAGAGATCTGATTGCAAGTACCCCATCATTTCGTGATCCTGAGGAACAAATTTGTGGGTGTGAGCATTATAAAAGAAATTGTAAACTGCTTGCAACGTGTTGTGGCAAGTTGTTTACTTGTAGTTTCTGTCATGATAAAGTCAGTGATCATTCAATGGACAGGAAGGCTTCAACTGAAATGATGTGTATGCGCTGCCTCAAAGTTCAGCCTATTGGATCTGTTTGCACAACACCATCTTGTGGTGGTCTCTCCATGGCAAAGTACTACTGCGGTATCTGCAAAGTATTTGACGATGAAAGGGAAGTCTATCATTGTCCTTTCTGCAACTTATGTCGTCTAGGGAAGGGACTTGGTACTGATTTTTTCCATTGTATGACATGCAACTGTTGTTTGGCAATGAAGTTGGTTGATCACAAGTGCCAAGAGAGGGGCCTAGAAACAAATTGCCCAATCTGCTGTGATTTTTTGTTCACATCTAGTGAAAGTGTTAGAGCTCTCCCTTGTGGCCATTTCATGCATTCAGCTTGTTTCCAGGCTTACACTTGTAGCCACTACATATGTCCAATATGTAGCAAGTCCTTGGGAGATATGACGGTATACTTTGGAATGCTTGACGCTTTACTGGCCTTGGAGGTACTTCCTGAAGAATACAGGGAACGCTGTCAGGATATATTGTGCAACGACTGCTCCAAGAAAGGGAAAGCGCGCTTCCACTGGCTCTACCATAAATGTGGAAGTTGTGGATCTTACAATACCAAGGTGATTAAGATTAGCTCAAGTTCCTGCTTAACAATGAATTAGTAAGCTTCAGTGCCTCTTGCTGTCTACTTGTTTCTTTAACCACACCCTTAAAATTGTCATGGCAAGATACAAGGACGACATTTTCTACGGTTTTCATAATAGAAAATTCAGGTACCAAGATGGAAAGATAAACGTAAATTCAAACATGACCAATGTGTTGAGGGAATTCAGGATCTTGCTGATTCTTCTAGTCTAACAGAGTCGGTTACTGTTGAAATCTGGAAAATGAAAGGATCCAAGGAATTATGATTGGGAATGAAATGGATAAATGTACATTTTTAGTTCTGATTGATAGGATTAATTTCTCATAATCATAAGCAGAATTCTTGCCTCTTTCTTTCA 4059 41.27 MLTTITPIHNTHGCGAVAAMAAASPVNSSMESSSTIVALESPILIFLFFHKAIRAELDHFHRDAIEFATNHQTAGDIRPLLQRYHFLRAVYKHHCNAEDEVIFPALDLRVKNVATTYFLEHEGESVLFCQLFELLNSNAWEEGSYKRELASRVRALQISICQHMFKEEEQVFPLLTEKFSFEEQAALVWKFLCSIPINMLEVFLPWLSSSISPDEHQIMCKCLSKIIPEQKLLQKIIFSWMEGARKARANQSSYDDSLEFQCLGFQVHDLICMPEKGNDTSESTRIGKRKYVEQSNFTYSTVSDACPINEILHWHNAIKKELNSIAEAARDLNFSEFSELSALKERLQFIAEVCIFHCIAEDKVIFPAVDAELSFADQHAEEEIQFDKLRILIESIQADQAKYSSAEINKKLSSHADQIIKTIQKHFHDEEMHVLPLARKHFGPQRQRELLYHSLCIMPLKWIERVLPWLVETLNEEEARSFLQNMQMAAPVSDHALVTLFSGWACKGHPRSICFSASAIDRCPERILTGDEESCSSFCSASAKHSCNLATECARSSKGGNAVCNGDLNGCLPSKNPSKKLHLTRVKQSPCVPGLGVDHDNNLGMRSMAAAKSLRSLCFRLYAPSLNSSLFSLETDPISRGSGSKSRPIDNIFKFHKAISKDLEYLDNESVNLGACNDTFFRQFCGRFYLLWGLYKAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEELFEGISSALSKLTDIRRDLKGKKKCNASSGMESHTSDCCDTVRMNIELATKLQGMCRSIRVTLGQHIFREESELLPLFHTYFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTLKQATRNTMFSDWLNEWWEGPATSPHHVESVIHLSGGSDSHDICDQQNDSVFKPGWKEIFRMNENELESEIRKVAQDSTIDPRRKDYLIQNLMTSRWIASQQMLPQATTGETSDARDLIASTPSFRDPEEQICGCEHYKRNCKLLATCCGKLFTCSFCHDKVSDHSMDRKASTEMMCMRCLKVQPIGSVCTTPSCGGLSMAKYYCGICKVFDDEREVYHCPFCNLCRLGKGLGTDFFHCMTCNCCLAMKLVDHKCQERGLETNCPICCDFLFTSSESVRALPCGHFMHSACFQAYTCSHYICPICSKSLGDMTVYFGMLDALLALEVLPEEYRERCQDILCNDCSKKGKARFHWLYHKCGSCGSYNTKVIKISSSSCLTMN 1238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 39920194 39928028 + XM_039037154.1 Bhi07g01299 39688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01299 1238 Gene3D nmb1532 protein domain like 643 868 - -
Bhi07g01299 1238 CDD RING-H2_Pirh2 1120 1163 - -
Bhi07g01299 1238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1116 1165 IPR013083 -
Bhi07g01299 1238 Pfam Zinc-ribbon 1168 1224 IPR039512 -
Bhi07g01299 1238 Gene3D - 1192 1233 - -
Bhi07g01299 1238 ProSiteProfiles Zinc finger CTCHY-type profile. 1057 1120 IPR017921 -
Bhi07g01299 1238 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 32 1233 - -
Bhi07g01299 1238 CDD Hr-like 45 173 - -
Bhi07g01299 1238 ProSiteProfiles Zinc finger CHY-type profile. 985 1054 IPR008913 GO:0008270
Bhi07g01299 1238 SUPERFAMILY CHY zinc finger-like 984 1048 IPR037274 GO:0008270
Bhi07g01299 1238 SUPERFAMILY Zinc hairpin stack 1058 1113 IPR037275 -
Bhi07g01299 1238 CDD Hr-like 652 808 - -
Bhi07g01299 1238 Pfam Ring finger domain 1120 1162 IPR001841 -
Bhi07g01299 1238 CDD Hr-like 310 436 - -
Bhi07g01299 1238 SUPERFAMILY RING/U-box 1120 1167 - -
Bhi07g01299 1238 Pfam CHY zinc finger 992 1067 IPR008913 GO:0008270
Bhi07g01299 1238 Pfam Hemerythrin HHE cation binding domain 47 175 IPR012312 -
Bhi07g01299 1238 Pfam Hemerythrin HHE cation binding domain 648 809 IPR012312 -
Bhi07g01299 1238 Pfam Hemerythrin HHE cation binding domain 307 438 IPR012312 -
Bhi07g01299 1238 SMART ring_2 1121 1162 IPR001841 -
Bhi07g01299 1238 Gene3D nmb1532 protein domain like 41 193 - -
Bhi07g01299 1238 Gene3D nmb1532 protein domain like 309 453 - -
Bhi07g01299 1238 ProSiteProfiles Zinc finger RING-type profile. 1121 1163 IPR001841 -
Bhi07g01299 1238 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1-LIKE 32 1233 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03460 Bhi-Chr1:87715669 Bhi07g01299 Bhi-Chr7:39920194 0 dispersed
Bhi01g03461 Bhi-Chr1:87715843 Bhi07g01299 Bhi-Chr7:39920194 4.65E-17 dispersed
Bhi07g01299 Bhi-Chr7:39920194 Bhi10g00135 Bhi-Chr10:2946594 5.94E-50 dispersed
Bhi07g01299 Bhi-Chr7:39920194 Bhi07g01300 Bhi-Chr7:39920709 2.52E-15 tandem
Bhi02g00363 Bhi-Chr2:6919945 Bhi07g01299 Bhi-Chr7:39920194 5.61E-12 transposed
Bhi01g03459 Bhi-Chr1:87715366 Bhi07g01299 Bhi-Chr7:39920194 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01299 K16276 - csv:101217252 2245.31