Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01326 AACAAAAACAAGTTAGGCCTAAGCAAACGGACATCTGATTCGTGCAACAATCACTACAAGCTGCTTCACATCATGTCGAGCACACCTACAATACAAAAAGGGTAAAAATCAAAGAAAGCACAATTTATGTTTATTTTATAAAACTCCAACCTTACAAAACGGATGAGTCATCTTCCACTCTTGTAAATGAGTTCAACAATATACTAACTATAGGTGCTCCACACGTGAACCATCCTCAAGTATAGCCACTGTATAAACTCTTCCTTTGCACACAGCCACCATCCACACGCACAGCCAGCCGAGATGCCAGAGTACTGTGTAACCGGCGGCACCGGCTTCATAGCCTCTTACTTGGTGAAGACACTGCTCGAGAATGGCCATCGCGTTCGCACCACCGTTAGAAACCCAGTAAACTATGGACATGTTGGGTTTCTGTGGGAGTTTAATGGAGCAAAGGATAGGCTGAAGATAGTAAAAGCTGATTTGTTAGAAGAAGGTAGCTTTGATGAGGCCATTCAAGGAGTGGATGGGGTCTTCCACACTGCCTCACCTGTGCTTGTTCCCTACGATAACAACATTAAGGAAACTCTGATTGATCCTTGTATAAATGGTACAATCAATGTACTAAAATCCTGTTTAAAAGCAAACAGTGTGAAACGAGTAGTGCTGACCTCTTCCTGCTCGGCAATTAGATATCGTTATGATGTCCAACAACTTTGTCCTCTCAATGAATCGCACTGGACAGATCCTGACTATTGCAAGCGCTACAACCTTTGGTATGCATTTGCAAAGACTTTGGCAGAGAAAGAGGCTTGGCGTATGGCAGAAGAACATGGGATTGATCTAGTTGTGGTGAACCCATCTTTTGTCGTTGGCCCTTTGCTAACACCAAAGCCAACCAGTACACAGCATCTCCTACTCAGCATTATTAAAGGTGAAAGGGGCGAATATCCAAATTCCACGCTGGGGTTTGTGCACATAGATGATGTGGTAGCAGCGCACATCTTGGTAATGGAAGATCCAAATGCATCAGGCAGGATCATATGTTCAAGCATAGTGGTTCACTGGTCACAGATCATTGATATGCTCAGAGCCAAATATCCATCCTACCCATTTGAAAACAAGTGCAGCGTCCAGGAAGGAGATTGCAACCCTCACAACATGGACACGAGCAAGATTTTTGAACTGGGATTCCATGGTTTCAAGACGATCGAGCAAATGTTTGATGATTCCATCAAGAGTTTCCAAGACAATGGATTTCTTTGAATTGGAAAAGAACCTTCAATAATTTTATCTTCTTTGACGCTTCACAAAATTTTAGAGCTTTGTGTAATTGAATATAAACGATTGAACGAGACAATCTGCCTCGTAGTTTAACCAAATTGATTCTGAAACTCCGTTCCGTTTTCAGGGTTCAA 1418 42.45 MPEYCVTGGTGFIASYLVKTLLENGHRVRTTVRNPVNYGHVGFLWEFNGAKDRLKIVKADLLEEGSFDEAIQGVDGVFHTASPVLVPYDNNIKETLIDPCINGTINVLKSCLKANSVKRVVLTSSCSAIRYRYDVQQLCPLNESHWTDPDYCKRYNLWYAFAKTLAEKEAWRMAEEHGIDLVVVNPSFVVGPLLTPKPTSTQHLLLSIIKGERGEYPNSTLGFVHIDDVVAAHILVMEDPNASGRIICSSIVVHWSQIIDMLRAKYPSYPFENKCSVQEGDCNPHNMDTSKIFELGFHGFKTIEQMFDDSIKSFQDNGFL 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40537490 40540267 + XM_039036451.1 Bhi07g01326 39715

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01326 320 CDD FR_SDR_e 4 297 - -
Bhi07g01326 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 315 IPR036291 -
Bhi07g01326 320 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Bhi07g01326 320 PANTHER TETRAKETIDE ALPHA-PYRONE REDUCTASE 2 1 319 - -
Bhi07g01326 320 Gene3D - 2 320 - -
Bhi07g01326 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 319 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01326 - - - csv:101219779 602.053
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01326 Bhi-Chr7:40537490 Bhi10g01271 Bhi-Chr10:29573917 6.58E-96 dispersed
Bhi07g01326 Bhi-Chr7:40537490 Bhi07g01327 Bhi-Chr7:40537908 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g304 . . . . . . Bma14g01708 . . Cmo18g01034 . Cma18g01024 . Car18g00943 Sed06g1887 Cpe09g00299 . Bhi07g01326 Tan04g0859 Cmetu10g0120 Lac13g0491 . . . Cla05g02302 Cam05g2475 Cec05g2498 Cco05g2540 Clacu05g2470 Cmu05g2332 Cre05g2449 Cone13ag0832 . . . Lsi04g00257 Csa05g02609 Chy10g01144 Cme10g00263 . Blo11g00754 Bda07g01535 . Bpe11g01623 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007652 1 2 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 3 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g01326 Bhi_Chr07 FPKM 64.016991 74.52887 26.053959 25.08156 26.47802 22.474037 26.086084 11.263928 11.239594 12.184467