Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01357 CCACCCGTGCATTAGCTTCATTCATTCAAAGCATCTTCTTCTTCTTTCTTTCTCTTCAAAATCCTTTAATCTTTCTTTCTTTCTCTTCAAACGCGCTTGTCGTGAAGTGAACTAAATGACACTCGCGGCTTGTCTTCTTCTCTCTTAAATGCTAAACCCTCCTCTATTTTCCCTTCTCAACCATTCCTTCCTTTTCTTTTTCCCTTCCATTCCAATGGCCAACATTTCTCTCTTCCTTCTCCCCCTTCTTTTCTCCTCTCTTTCCGGCTTCCTCTGCCGGAGCTTGCCTCCCACCCCTACAACCGCCGTGCTCGACGTCGCCACTTCCATTCAGAGGACTCAACAGATCTTCGCATTGGACCCTGAATCTTCAATGACAGATGAAAATACCGTCTCCGATTCATCTTCCTTGACTCTCCAGTTGCATTCCAGGATTTCAGTTATGAAAACCTCCCACAGTGACTACAAATCCCTCACATTATCCAGACTGAAGCGCGACTCTGCTCGAGTCAGATCTTTGACTGCTAGGATGGATTTAGCCATTCGAGGCATTACTGGAGCAGATCTTGAACCCCAATTTGGGGCTGAGGATTTCGAGAGTCCGATTGTGTCAGGCGCGAGTCAGGGGAGTGGTGAGTACTTCTCCCGAGTCGGAATCGGTCGGCCGCCGAGTCCGGTTTACATGGTGCTCGATACTGGCAGCGATGTAAGTTGGGTACAATGCGCGCCTTGCGCTGAATGCTACGAGCAAACAGATCCAATCTTTGAGCCTACTTCCTCTGCTTCTTTCACTTCTCTGTCCTGCGAAACAGAGCAATGCAAATCGCTCGATGTTTCGGAGTGCCGGAATGGTACTTGTCTTTACGAGGTCTCTTACGGTGATGGGTCTTACACAGTCGGCGATTTCGTTACTGAAACTGTTACTTTCGGCTCGACTTCTCTCAGAAACATTGCCCTAGGTTGTGGCCATAACAATGAGGGTTTGTTCATCGGCGCTGCTGGCTTGCTCGGACTCGGCGGCGGCTCGCTCTCGTTCCCTTCACAGCTCAATGCCTCGTCTTTCTCGTATTGTCTCGTGGACCGCGACTCTGATTCCACCTCGACTCTCGATTTCAACTCACCGATTCCTCCCGATGCCGTAACCGCGCCGCTTCACCGGAACCCTAATTTAAACACGTTCTTCTACCTAGGCGTGACGGGGATGAGCGTCGGAGGTGATATACTTCCGATTCCGGAGTCGTCGTTCCAAATGAGCCAAGACGGTAACGGCGGGATCATCATCGACTCCGGTACCGCCGTGACGCGGTTGCAGACCACCGCTTATAACGTGCTGCGCGATGCATTCGTCAAGAGCACGCACGATTTGCAGTCCGCACGTGGCGTGGCGTTGTTCGATACATGTTACGACTTGTCGTCAAAGTCGAGAGTTGAAGTACCGACGGTGTCGTTTCATTTCGCCAACGGGAAGGAATTGCCGTTGCCGGCTAAAAATTACCTGATACCGGTTGACTCTGAAGGGACGTTTTGTTTCGCCTTTGCTCCTACGGATTCCACGTTGTCAATCCTCGGGAACGCACAGCAGCAAGGGACACGTGTCGGTTTCGATCTAGCTAATTCGCTCGTTGGGTTCTCCCCCAACAAATGTTAATTGTTATATAGTTTTTTTTTTTTTTTTTTTTTAATAATAGAAGTTTCGTCGTCTTAATCAGTTTCTTAATCCCTTTTTTTATTAAGCTAATTACTGATTTTCAAGTGGCTCTTGTAACATAGAATGATGAAATGGACCACTGGTTAACGG 1798 48.78 MLNPPLFSLLNHSFLFFFPSIPMANISLFLLPLLFSSLSGFLCRSLPPTPTTAVLDVATSIQRTQQIFALDPESSMTDENTVSDSSSLTLQLHSRISVMKTSHSDYKSLTLSRLKRDSARVRSLTARMDLAIRGITGADLEPQFGAEDFESPIVSGASQGSGEYFSRVGIGRPPSPVYMVLDTGSDVSWVQCAPCAECYEQTDPIFEPTSSASFTSLSCETEQCKSLDVSECRNGTCLYEVSYGDGSYTVGDFVTETVTFGSTSLRNIALGCGHNNEGLFIGAAGLLGLGGGSLSFPSQLNASSFSYCLVDRDSDSTSTLDFNSPIPPDAVTAPLHRNPNLNTFFYLGVTGMSVGGDILPIPESSFQMSQDGNGGIIIDSGTAVTRLQTTAYNVLRDAFVKSTHDLQSARGVALFDTCYDLSSKSRVEVPTVSFHFANGKELPLPAKNYLIPVDSEGTFCFAFAPTDSTLSILGNAQQQGTRVGFDLANSLVGFSPNKC 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41107108 41108905 - XM_039035836.1 Bhi07g01357 39746

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01357 499 Gene3D Acid Proteases 326 499 IPR021109 -
Bhi07g01357 499 ProSiteProfiles Peptidase family A1 domain profile. 164 495 IPR033121 -
Bhi07g01357 499 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 34 499 - -
Bhi07g01357 499 Gene3D Acid Proteases 143 322 IPR021109 -
Bhi07g01357 499 Pfam Xylanase inhibitor C-terminal 345 495 IPR032799 -
Bhi07g01357 499 Pfam Xylanase inhibitor N-terminal 164 321 IPR032861 -
Bhi07g01357 499 PANTHER ASPARTYL PROTEASES 34 499 IPR001461 GO:0004190|GO:0006508
Bhi07g01357 499 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 179 190 IPR001969 GO:0004190|GO:0006508
Bhi07g01357 499 SUPERFAMILY Acid proteases 158 499 IPR021109 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01357 K22683 APF2; aspartyl protease family protein [EC:3.4.23.-] - csv:101222856 838.565
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01357 Bhi-Chr7:41107108 Bhi08g01215 Bhi-Chr8:37773783 0 dispersed
Bhi01g00492 Bhi-Chr1:8780345 Bhi07g01357 Bhi-Chr7:41107108 4.32E-133 transposed
Bhi03g02693 Bhi-Chr3:67314841 Bhi07g01357 Bhi-Chr7:41107108 2.28E-79 transposed
Bhi04g00918 Bhi-Chr4:23458328 Bhi07g01357 Bhi-Chr7:41107108 3.68E-43 transposed
Bhi04g01921 Bhi-Chr4:48438323 Bhi07g01357 Bhi-Chr7:41107108 6.45E-60 transposed
Bhi07g01065 Bhi-Chr7:34546926 Bhi07g01357 Bhi-Chr7:41107108 1.49E-134 transposed
Bhi09g00551 Bhi-Chr9:11684353 Bhi07g01357 Bhi-Chr7:41107108 7.27E-60 transposed
Bhi09g01442 Bhi-Chr9:36429973 Bhi07g01357 Bhi-Chr7:41107108 5.74E-129 transposed
Bhi09g03682 Bhi-Chr9:91907807 Bhi07g01357 Bhi-Chr7:41107108 3.28E-75 transposed
Bhi12g00811 Bhi-Chr12:24492124 Bhi07g01357 Bhi-Chr7:41107108 5.32E-47 transposed
Bhi12g01149 Bhi-Chr12:34496609 Bhi07g01357 Bhi-Chr7:41107108 6.25E-134 transposed
Bhi01g03491 Bhi-Chr1:88449963 Bhi07g01357 Bhi-Chr7:41107108 7.50E-157 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g277 . . . . . Bpe10g00945 . Bma15g00079 . Cmo18g01052 . Cma18g01036 . Car18g00961 Sed07g2064 Cpe09g00282 . Bhi07g01357 Tan04g0891 Cmetu10g1611 Lac13g0470 Hepe01g1214 . . Cla05g02322 Cam05g2494 Cec05g2518 Cco05g2560 Clacu05g2488 Cmu05g2351 Cre05g2467 Cone13ag0848 Cone19ag0851 . . Lsi04g00280 Csa05g02091 Chy10g01124 Cme10g00282 Blo06g00969 . . . . . . . . . . . . . . . Cpe04g01410 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002030 1 2 1 2 2 2 4 2 2 2 2 2 4 2 2 3 2 4 3 2 2 2 2 2 2 2 2 3 2 1 66
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g01357 Bhi_Chr07 FPKM 1.799301 2.115377 1.640704 1.863556 1.255061 1.603811 1.662071 1.18946 1.003605 1.201767