Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01373 AGAAATAAAAAACCGCTTGAAATATGTACAAAAGAAGAAACCGTCTTGAATCCACTATGGAGGACCAAAAACCCTAGCAAGGATCCACACGCTCTCAATCTGAACTCCCGTCGAGCTTCGCAATTGGCAACTCTTGAACACAATTCCCCCATCGTAATTCTGTCCATCAATCACCATGTCCGGCAGTCGAGCCAGAAACTTCCGCCGCCGTGCCGACGACAATGACGACGACGACGAACCCAATGGCTCCGCCGCCCCTTCTTCAATCAGCGCTTCTAACGCTTCATCAAAACCCTCTTCCACCTCCTCTGCCGTTGCCAATAAACCCAAGAAGGCAAACCCTCAGGTGCCCAAGCTTCTCAGCTTCGCCAGTGATGAAGAGAACGATGCCCCACTTCGCCCTTCGTCTTCCAAATCAACCAATTCCAAGAAGCCTTCTTCTGCCCGACTTGCCAAGCCTTCATCCACCCATAAGATCACTGCATTAAAGGATCGCATCGCTCACTCCTCTTCAATTCCGGCTTCTGTTCCCTCCAATGTGCAGCCTCAAGCTGGAACTTATACCAAGGAGGCCCTCCGCGAGTTGCAGAAGAATACCCGCACGCTTGCGAGCTCGAGACCTTCATCCGAATCTAAGCCTTCTGCCGAACCTGTCATTGTTTTGAAGGGTCTTCTTAAGCCCGCTGAACAAATCCCGGACAGTGCTAGAGAAGCTAAAGAGTCGACCTCCGAGGATGAAGAAGGGGGTAGTAATGCGAAGAGCGCTGGTTCGCTTCGGAGGAGTAAGGAAGACACCTTAGCTCGAATGGCTTCAATGGGGATTGGCAGAGGAAAGGATTCATCTGGGTCGTCAATTCCCGATCAAGCGACCATAAATGCAATTCGCGCGAAAAGGGAACGTATGCGACAGGCTGGGGTTGCAGCGCCGGATTATATATCGTTAGATGCAGGTAGCAACCGTACCGCGCCGGGGGAGTTGAGCGATGAGGAGGCAGAGTTTCCGGGGAGAATCGCCATGATTGGAGGGAAGCTAGAGAGCTCGAAGAAGGGCGTGTTTGAGGAAGTTGATGAGCAGGGAAATGACGGGGTAAGAACGAATATTATTGAGCACAGCGACGAGGATGAGGAGGAGAAAATTTGGGAGGAGGAGCAGTTTAGGAAGGGACTGGGAAAGAGAATGGACGATGGTTCTACTAGGGTGGAGAGCACTAGTGTCTCTGTTGTTCAGAGTGTTCAGCAGCAAAACTTGATTTACCCCACTACAGTTGGGTATAATTCGGTGCCTAGCATGTCTACGGCTACAAGTATAGGAGGTTCTGTTGGTGTTTCACAGGGTTTGGATGGGCTATCGATATCTCAGCAAGCTGAGATTGCTAAAAAAGCTATGCAAGATAATATGGGGAGGCTGAAGGAATCCTATCGGAGAACTGCATCATCGGTGTTGAAGACTGATGAAAATTTGTCTGAATCTTTATTGAATATCACAGCGCTTGAAAAGGCTCTTTCTGCTGCTGGGGAGAAGTTTATATTTATGCAAAAGCTTCGTGACTTTGTTTCCATTATCTGTGACTTTTTGCAGCATAAAGCTCCTTTCATAGAGGAACTCGAGGAGCAAATGCAGAAACTGCATGAAGAACGTGCTTCTACTGTCGTGGAAAGAAGAGTAGCTGATAATGACGATGAAATGGTGGAGATAGAAATGGCTGTAAAAGCAGCTACGTCAATCTTGAATAAGAAAGGGAGCAGCACTGACATGATTGCTGCAGCCACAAGTGCAGCCCAGGCAGCAATTGCCTCATCAAGGGAACAGGCAAATCTACCGGCTAAGTTAGATGAGTTTGGTAGAGATTTAAATCTGCAGAAACGTATGGATATGAAGCGGAGAGCTGAGGCTCGAAAACGCCGGAGATCTCAATACGATTCCAAGAGACTAGCATCCACAGAGGTTGATGGCCATCAAAAAGTAGAAGGAGAGTCTAGCACTGATGAGAGTGATAGTGATAGTGCAGCATACCAGTCAAACCGTGATTTATTGCTTCAGACTGCTGAACAGATTTTTAGTGATGCAGCTGAGGAGTTTTCCCAACTTTCTGTGGTGAAACAGAGGTTTGAAGAATGGAAGAAAGATTATTCAGCAACATACCGAGATGCTTATATGTCATTAAGCATTCCTGCTATCTTTTCTCCTTATGTGAGATTGGAACTCTTGAAGTGGGACCCCCTACATGAAAATGCAGATTTCTTTGATATGAACTGGCATTCTTTGCTATTCAATTATGGTATGCCGGAGGATGGAGGTGATTTTGCTCCAAATGATGCGGATGCTAACCTTGTCCCAGAACTAGTCGAAAAAGTTGCACTTCCAATATTGCACCATGAAATTGCTCACTGTTGGGACATGCTTAGCACACGTGAAACCAGAAATGCAGCTTTTGCTACAAGCTTGATTACTAACTATGTTCCAACATCAAGTGAAGCTCTTACAGAACTATTGGTTGTTATTCGCACCCGTTTGTCAAGTGCTGTTGAAGATCTTATGGTTCCTACTTGGAATGCACTTGTGATGAAAGCTGTTCCAAATGCTGCTCGAATTGCAGCATATCGGTTTGGCATGTCCGTTCGTTTGCTGAGAAACATATGTTTGTGGAAAGAAATCATTGCACTGCCCATTTTAGAAAAGCTTGCTCTTGAAGAGCTCCTGTATGGGAAAGTTCTACCTCACGTTAGAAGTATCGCGGCGAACATCCATGATGCAGTCACAAGAACTGAGAGAATCATTGCTTCTCTTTCAGGAGTGTGGACAGGACCCAGCATCACCGGGGATCGCAGTCACAAGTTGCAACCATTGGTAGATTATGTTCTGCTGCTGGGAAGAACATTGGAGAAAAAACATATTTCAGGCATAGCTGAGAGCGAGACAAGTGGACTAGCTCGGCGATTAAAGAAGATGCTAGTTGAGCTGAATGAATATGACAACGCAAGGGACATTGCTAAGACCTTCCATCTCAAGGAGGCATTATGAGCTCCATCCAATGGGCATCTGGTCTGTTCTTGGACGATGTATATTCGTATGAAACATTGATGAGGTTTGTCGTCTCAAAGGCGACCGTCATTCTTATAGAATCCACACCAACTTTATAAGCAAATGCAGCTTTAGATTTTGAAGAGAGCTCAGCTAACTGCGGAGTTATGACCCATGAGCATTGAATAAATGTATTGGATGTCTTAGATTCATACGTTGAAGGAAGGAAGAGAGATTTTGAGCGAATAACACGAACAGTTCTTGGAAAACATATGATTGTTATGGCCATTTTCGAGAATTCCCCTTCCATTTATTCTTCGTCATGGGAAGTTTTACTGGGTGCAATGTACTGTAATTTTGAAATTTAGCTTTCTAAAATAAATTGCAAAAGGGAAACGAATCAATGGGTTTTATTATTTTTAGGTTGA 3450 45.36 MSGSRARNFRRRADDNDDDDEPNGSAAPSSISASNASSKPSSTSSAVANKPKKANPQVPKLLSFASDEENDAPLRPSSSKSTNSKKPSSARLAKPSSTHKITALKDRIAHSSSIPASVPSNVQPQAGTYTKEALRELQKNTRTLASSRPSSESKPSAEPVIVLKGLLKPAEQIPDSAREAKESTSEDEEGGSNAKSAGSLRRSKEDTLARMASMGIGRGKDSSGSSIPDQATINAIRAKRERMRQAGVAAPDYISLDAGSNRTAPGELSDEEAEFPGRIAMIGGKLESSKKGVFEEVDEQGNDGVRTNIIEHSDEDEEEKIWEEEQFRKGLGKRMDDGSTRVESTSVSVVQSVQQQNLIYPTTVGYNSVPSMSTATSIGGSVGVSQGLDGLSISQQAEIAKKAMQDNMGRLKESYRRTASSVLKTDENLSESLLNITALEKALSAAGEKFIFMQKLRDFVSIICDFLQHKAPFIEELEEQMQKLHEERASTVVERRVADNDDEMVEIEMAVKAATSILNKKGSSTDMIAAATSAAQAAIASSREQANLPAKLDEFGRDLNLQKRMDMKRRAEARKRRRSQYDSKRLASTEVDGHQKVEGESSTDESDSDSAAYQSNRDLLLQTAEQIFSDAAEEFSQLSVVKQRFEEWKKDYSATYRDAYMSLSIPAIFSPYVRLELLKWDPLHENADFFDMNWHSLLFNYGMPEDGGDFAPNDADANLVPELVEKVALPILHHEIAHCWDMLSTRETRNAAFATSLITNYVPTSSEALTELLVVIRTRLSSAVEDLMVPTWNALVMKAVPNAARIAAYRFGMSVRLLRNICLWKEIIALPILEKLALEELLYGKVLPHVRSIAANIHDAVTRTERIIASLSGVWTGPSITGDRSHKLQPLVDYVLLLGRTLEKKHISGIAESETSGLARRLKKMLVELNEYDNARDIAKTFHLKEAL 948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41410433 41415850 + XM_039036490.1 Bhi07g01373 39762

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01373 948 MobiDBLite consensus disorder prediction 1 238 - -
Bhi07g01373 948 Pfam GC-rich sequence DNA-binding factor-like protein 639 842 IPR022783 -
Bhi07g01373 948 PANTHER LD29489P 1 935 - -
Bhi07g01373 948 Coils Coil 474 494 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 174 189 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 75 96 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 113 128 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 576 603 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 23 51 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 139 154 - -
Bhi07g01373 948 MobiDBLite consensus disorder prediction 564 613 - -
Bhi07g01373 948 PANTHER GC-RICH SEQUENCE DNA-BINDING FACTOR 1 935 IPR012890 GO:0000398|GO:0003677|GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01373 K13211 GCFC; GC-rich sequence DNA-binding factor - csv:101204517 1588.93
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g258 . . . . . . . . . Cmo18g01064 . Cma18g01046 . Car18g00971 Sed06g1860 . . Bhi07g01373 Tan04g0900 Cmetu10g1083 Lac13g0456 Hepe01g1223 . . Cla05g02331 Cam05g2505 Cec05g2528 Cco05g2571 Clacu05g2499 Cmu05g2361 Cre05g2477 . . . . Lsi04g00292 . . Cme10g00293 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009042 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 3 1 1 1 2 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi07g01373 Bhi_Chr07 FPKM 8.348892 6.703961 12.669658 11.760546 39.115768 38.032955 42.519558 10.825797 10.926524 10.520135