Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01374 AATATAAAAGATCTCATCTTTTTCTCATCTCACTCTCTACAAAAGGTATAGGGGATGGACAAAGAATAATGGCGTAAGATGAAAGTAAAGCCAAGAGAGAAAGAGAGAGAGAAAGAAAAAGCTCTATATATTGGAATGGTGGTGGGGAGAGATTTTGCAGAGAGATATAGCTAGAGAGATTACTAAAAAAAAAAAAAAAAAAAAAAAAAGATATCCAAAAGAAAAGAGAAGACAAAAGAAATTCACAAGGAGAGTTCATAGAGATATAGATAAGGATTTAACACTCAAATTCCAAACCTTCTTTTTCTTTATTTTTTCTTTTCATTTTCTTGTTTATTTTTCTTATTAATTAGCACAATTGCATAGAGGGAAAAAAAAGGGGAAAAAAACCTTCTTTTTTGGGAGTGATATGTGTGGGGAGGATCAAGAAGAGGATCATCATCAACAACAACATCAAGGGGAGTGTTCACAAACAATTGAGAATATGTTTCAAGAACAACTTCTTCTCCACCAACAACTACAAAACAACAACAATAACACTGATCAGCATCATATGATGTATGGCGGAGATCCTCATCATCATCATGGAATTGGAAGATCAGGGTTAATTTTTCCACCCGAGGTCGTGTCACCGATGCTCCAACCGTGGTCGTCGCTTAATCCGTTTATGATCCTTCCGCCTCCACCGCCACCACCGCTACCGACATCATTATCATGTTCATCATCAGCTTATGGTAGTTTGTTTAACCGAAGACCTCCTAATTGTCTTCAATTTGCGTATGACGGTCCATCTTCGGCAGACCATCTAGGTCGAATCATATCGACCACTCTCGGACCGGTGGTTCATCCAGGTTCCACGGCTCCCTTTGGCCTACAAGCTGAGCTTGGCAAAATGAGTGCTCAAGAAATAATGGATGCTAAAGCTCTTGCAGCTTCTAAAAGCCATAGTGAAGCTGAGAGGAGAAGAAGAGAAAGAATCAACAATCATCTTGCTAAGCTAAGGAGCTTACTCCCTAGTACCACTAAAACAGACAAAGCATCATTGTTAGCAGAAGTGATAGAACACGTGAAAGAACTAAAACGACAAACATCATTGATAGCAGAAACAAGTCCAATTCCAACAGAAGTTGATGAAGTAAGTGTAGATGATGTTTCAGAACAAGAGATGATGATGATAAGTAATATTGGATCATCACCCAAATTTGTAATAAAGGCTTCTCTTTGCTGTGAAGACCGTTCTGATCTTCTCCCTGATCTCATTAAAACCCTCAAATCCTTACGTTTAACAACTCTCAAAGCTGAAATCACAACCCTTGGTGGTCGTTTAAGAAATGTCTTGTTTGTCACTGCTGACGATGAACAACAACAACAACAACAACAAAATATTACATCTATTATTCAAGATGCCCTCAAAGCTGTCATTGAAAAAACTTCAGGGGATCATGATTCTTCTTCAGCAAATATCAAAAGACAAAGGACCGCTACTGCAAATAACATTAATAATATCCTTTAATTTTCTTTTTTTCTTTTTTTATATAATTTTGGTAATGATCATATTCATACCATATAGTACTGAAAAATTTGATCTTTTTCGTATGGAGATAAAAGGGTGATCTTTCTCTATGATGGGTTTTTTTCTTTTTTTTTTTATTTATGGCTTAAAAAATGATGTGAGGTTTTTTTTTTATTTTTTTTTTTTCAGAGTTGCAGTGAAGTTTTTAAGAAAAACCCTAATGAGGTTTGCATGTGCTGCAGTTGTGTCCCCATTGATATTGCAAAGTGATGCAACAAAAAAAAAAGATTTTATGCATAATATTGTCTTTGACCTTTGTTGGGGTTTTCCCTTTTAAGTTGGAATCATATTGGTCCTCCCTTTTGTTTTCAGATTTTGTTGCAATATTTTTGGGTTTGTTTAAT 1917 35.79 MCGEDQEEDHHQQQHQGECSQTIENMFQEQLLLHQQLQNNNNNTDQHHMMYGGDPHHHHGIGRSGLIFPPEVVSPMLQPWSSLNPFMILPPPPPPPLPTSLSCSSSAYGSLFNRRPPNCLQFAYDGPSSADHLGRIISTTLGPVVHPGSTAPFGLQAELGKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIEHVKELKRQTSLIAETSPIPTEVDEVSVDDVSEQEMMMISNIGSSPKFVIKASLCCEDRSDLLPDLIKTLKSLRLTTLKAEITTLGGRLRNVLFVTADDEQQQQQQQNITSIIQDALKAVIEKTSGDHDSSSANIKRQRTATANNINNIL 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41419413 41422772 - XM_039037053.1 Bhi07g01374 39763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01374 367 Pfam Helix-loop-helix DNA-binding domain 177 223 IPR011598 GO:0046983
Bhi07g01374 367 Gene3D - 168 232 IPR036638 GO:0046983
Bhi07g01374 367 SMART finulus 180 229 IPR011598 GO:0046983
Bhi07g01374 367 PANTHER TRANSCRIPTION FACTOR BHLH30 75 363 - -
Bhi07g01374 367 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 229 IPR036638 GO:0046983
Bhi07g01374 367 CDD bHLH_AtAIG1_like 169 246 - -
Bhi07g01374 367 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Bhi07g01374 367 PANTHER TRANSCRIPTION FACTOR BHLH30 75 363 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01374 Bhi-Chr7:41419413 Bhi08g00529 Bhi-Chr8:17959657 1.17E-92 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1568 PF00010 HLH 5.80E-13 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01374 - - csv:101214615 552.747