Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01388 TCCTCATTTTCCGCTCCGTTCTCGTGGGAAAAAATGGGCATCTCTATAATTCCAAGCTGCCCAATTCACCATTTGGGCCGGGCCGGGCCGTCTTGATATAGCTCTTTTCTAGATATAACATTTGGGCCAGGCTGAACACATTTGAACTTTGAAGCCCAGAAATCTGGCCGAAGTAATCGTCCATCGATGCCTTCTTTGTTCCGAACTGAAATTCCAGAACCGGCGAGTCAACCCACCGATACAAAGCAGAATCGGCGAGTCAGCCCACCGATTCAAAGCTCAGTCAATTTGTTTTTTTTACTTCCATGGTCGCAGCCGAGCTAATCTGCTATTCAAAATCCAGACGGCCACAGATGGTTGTTCTACTTTGAGCTTCAGCTTACGCGATCTGCGAACCCCTCGAGGCCCCTTTTTTTTCCTCAGGTAAGTAAAATTCCACCCATCTCTTTCACTTTGCTGGAAACTTAACAAAATTATGTACAACACTTGTGTCAGCTCAACTGTATATTCGATTCGGAGTAATGGGCCTCTTTCCCATTGCTTTAATGAGCGTCCCATCTTCTTAAATGAAAGATGTAATGGAAACCGATTTCATCCTTCATCGTCGTCATCATTATGTTGTTCTTGTTGTGTTTGTTATACATTTCCAACCCAGAGAGTGCCTGTAGGCCCTAGCATTTTCTATGGGCCGAGGCAATCCACCCTGCTTCAATGGTCGATATCTAGGAGGTTGATGTTGGGAGGCCGAAACCGGTTCTGTTACACGCTTCCTGAATATGGGCGTGTTCTGGATTGTTATGAGGTTCCTTTTTCTATAAGTGATGGTGGGACTTGTCATTGTAGTGAGGGAAGGAGGTATAGAAGATCTTGTATGATTTCTGATAGTGATTGTGAATTTGACAAATCGCATGGATTTGATGAAGAGGACATTGCTGAAGCAATGATCAGTTTGATAAGGGAGGGTTTTGGAAGCCAGGAAAGAATTAAGACATCTAAGAGAGTGGAAGTTGGAAACCAAAGAAAGTGCGGAGCAAAGGAGGGAAATTTAAGTTCATCGAGACGAGTAGAACTGGAGAAAAAGATGAGAAGAGGTGTCGAGGAGAAAAGGTTTAGTTCATTTGAAAAGATAAGAGTAGATAAGAAAAGAGAGAGTAACAGTCAGCAAGAAAGAGAAGAGAGGAAAAGCAATAAGTTCGATTCTTTAAATAGTAAACATAATAATAAAGTTGGATCAATGGCAGTTGAGTTGAGGAAAGATGGATATAGGCTGAATAGTGATCAGTTAGTTAATTCAAGAGCTGATAGTCAGAGTTTAAGAAAAGAAGGGTCTACTTGTTCATCTTATTATTCACTCTCCTCCACTGGGGATATTGAGAGTGATGCTGAAGTTGAAGACAAGAATGTGCAATTTGTTGAAGAATCGTCCAGTGGGTACAGATACGAATCTGTGAGTGATGTGGGAGAAAAATTAGATGGGCAGATCAAGGAAGCGTTCAAGAGACAAGCAGAGAATGAGAAGAGGCGAGAAGAGGAATCAGTGGTCCGCGATCCTACAGTTGGGAATAGTGCCGATTGGCATTTGAGGAAGAACTCAGATAATAAACTTAAAATGTTAACAACAGTAACATCCTCCGTGAGTGGAACCTCTGATATGAACTCAAGATTGTCAAGGGCCAGGGAAAGTGGTTATGCATGTACTTCAAGTCCCAAGAAGAAGTTTGTTGACAAGAAAGAGGAATCGAAAATGGCTGTGACTTTGAATGAGCAATCAAAACAATATGATGTATCAGGTAAGAAAGTGGGTGGTGTGTTTATAAATGAAGGGAAAAAACTTGCAGAAGTATCAGAAATCAGCCACAGTAGTGCAGAAGAAATTTCGCATTCTCATAAAAGACTAACCATTAAGAATGAAAACCTAGAATTAGATGCAAATCTCATCAAGAAAGCAAGCAACAACAATCATGGTACTGGCCGTCCTGTCCTTCAAGAAAAAAGTTCAAGACGAAGTTCATCATTTCAACAACTTTTGGGAGTTTCAGAAAATAGGAGAACTGAGAGAGAAAGTATCTCTCATCAGACAAGCCAGTCTGATGCAAGTGAAAGTACAGGTCTCCATGTAACTTCTAATCAAAAGGCTGAAGAAGAACATCATCAAATAGGAAATCATCCCACTGGAGAAGTGGATTCGAGACAAAAGTTTCTTCATCTTGGTGTTATATCGGTAATCAAAGAGGGTAATACCAACATCTCAAGTTCTGAAATTAGAACACAAAATGAGGAACAAAATGCAGCATTAGTTAATGCATCAAATTTTGTGGCTAAAGACATAAAGTCTTCGACAGATCAGAAAGATTCTCAGAGAGTTATGTCCAGAAAAGGTTCCCGAGATGCCTCTGACATTTCAATGGTTCATGGTACCGATAAAATATCTGCTACACATTCTGAAAAAACATTTGAAAGCAGAATCTTCAAGCAAGAAACTAATAAATCATTAGTGGAAAAAACCGTCAAGGAAACCATAATAAGACGTGGTCAAAATAATAATCGTCTGGTGCAAACTGAATCGGGAAAAGAGGCTAAAAATCATGTAGAAAAATCAGAAGTTCAAGGATCCATTAATTTAAGTTCCCAAAGTAGTTATCAAGGGATTGGTTTGAATAATGAAGAAAATAAAAGGTCACAGGCAGTGTTAATGCCTCCTCCATCTCAGCTTGTAGCTAGAGAACCATTGCGAATAGATTCTACTAGTGAAATGGCAAGCCAAGTAGTTTCCAGAAGAACATCAGGAAGCAGTTCAGGTGCTTCCTACATGCAGCCAGGAGGAAGCCCAGCTTTGGACCGTACATCCTACCGAGGAAGTGGGGCAGATGAGAGTATCGAGGATTCTGTATACCTTATCACTCCTGATGATACTCTAGGTTCAGCTGACCGTTTAGAGAGATCATCTGCACAGTTTGTTGGTGAGTTTATTGAGAAGTCCAGGGATGAACTCTTAATTTCTGAAATTCATAAGGAGAAAAATATCTCTGAGGTTGATTTACTACATGAAGAGAAGCATGGAGAACATAATTTGGTAGATTACCGTATGAAGGACCATGACTCAAGGCTCTCGTCTGGGAGTTCTGGAACCAAGGGTCCTTCTGATGAAATGTGGCATGTAATGGACTCAACTACCGAGCAGCCTCCCAAAACTGATGATCCTGAGATTAGTGCACACAGTGAGAATGCAATTGTCAAGAGAAGTGGCAAATCCTTGTGGAATGTCATTTCAGACATAGTTCGTCTCCGTTGGAATTCACGTGCTGAAACCTCTGAGTCAGCTTTAAGATCAGGAGGAAGAAATTCACCAAATGAGTCTGTTAGTAATGAGACCTGGTTTTCTGGCCGTGAACATGAGGAGACTGATAATAAGAAAATGGAAAGGACCACAGTTTCTGAATTCACTTATTTGGATCAGTTGGAAGAACCAAATCTTTCTGCCCAAGGCCAAGATTTATCTGATGATAAGACAGCCAAAAGTATATACTCTGAAGTAGATAATACATCTTTCCCAAATATAATGGAGACCAAACCATCAGGTGGGACTTTGTTAGTTTCTGGAGAAGCCATCTTAACTGATGGTAGGAAGGTTGACGTTATTTCTTCTGGTTTGGATATAGAACAGTCATCATTACCACTGTCTACCCAAGGCATAAGAGGATCTTCTATTCAAGAAATGTTTCGTAGTGGTAAAACTGATGCCTTTGCAAGCAGCTCTGCAGATCAGTTGGGGCATTCTTCTGATGCTACACTATCAGATATATCAACAACTGGAACCAAGGATGTGGAAGTGAAACAGAGGAAGCTTCAAAGAAACAAGCAAGTTCTAAAAGACAGGTTTGATGAATGGGAAGAAGCATATCTACTCGAAACTGAGCAGCGAAAAATTGATGAAATATTCATGAGGGAAGCACTAGCTGAAGCCAAGAAGGCTGCAGATACTTGGGAAGTGCCTGTTGGAGCAGTATTGGTGAAACATGGAAAGATTATTGCTCGTGGCTGCAACCTGGTCGAAGAGTTGCGAGATTCCACAGCCCATGCAGAAATGATTTGTATTCGGGAGGCTTCAAAGCAATTAAAGACATGGAGGCTTGCTGACACAACTCTTTACGTGACACTTGAGCCGTGTCCTATGTGTGCTGGAGCGATACTACAAGCACGAATAGAAAATCTTGTGTGGGGAGCACCAAATAAGCTTCTTGGAGCTGATGGCAGCTGGATCAGACTTTTTCCTGATGGTGGGGAGGGAAATGTCTCAGAACAGTCCGAGAAGTCTGCTGCACCCGTCCACCCATTCCACCCGAAAATGACGATCCGGCGAGGTGTGTTGGGATCTGAATGTGCTGATGTAATGCAACAATTCTTTCAGCTGAGGAGGAGAAAGAAGCAAAAGAAAGAAAACACTCCACCTCTAGCTATTACGCATCATCCATCAAAATTTATTACTAAGATGCATAACATTTTCCACATATTGTTCTGTTTGTAATGGAAATGAGATGATCAGAGTGCATATGTCCATTTGTATCTAACAATAAGCGAGCAAGTAGTAAATTGATCATTCCTTTTCTAGAGTTCAA 4616 41.16 MYNTCVSSTVYSIRSNGPLSHCFNERPIFLNERCNGNRFHPSSSSSLCCSCCVCYTFPTQRVPVGPSIFYGPRQSTLLQWSISRRLMLGGRNRFCYTLPEYGRVLDCYEVPFSISDGGTCHCSEGRRYRRSCMISDSDCEFDKSHGFDEEDIAEAMISLIREGFGSQERIKTSKRVEVGNQRKCGAKEGNLSSSRRVELEKKMRRGVEEKRFSSFEKIRVDKKRESNSQQEREERKSNKFDSLNSKHNNKVGSMAVELRKDGYRLNSDQLVNSRADSQSLRKEGSTCSSYYSLSSTGDIESDAEVEDKNVQFVEESSSGYRYESVSDVGEKLDGQIKEAFKRQAENEKRREEESVVRDPTVGNSADWHLRKNSDNKLKMLTTVTSSVSGTSDMNSRLSRARESGYACTSSPKKKFVDKKEESKMAVTLNEQSKQYDVSGKKVGGVFINEGKKLAEVSEISHSSAEEISHSHKRLTIKNENLELDANLIKKASNNNHGTGRPVLQEKSSRRSSSFQQLLGVSENRRTERESISHQTSQSDASESTGLHVTSNQKAEEEHHQIGNHPTGEVDSRQKFLHLGVISVIKEGNTNISSSEIRTQNEEQNAALVNASNFVAKDIKSSTDQKDSQRVMSRKGSRDASDISMVHGTDKISATHSEKTFESRIFKQETNKSLVEKTVKETIIRRGQNNNRLVQTESGKEAKNHVEKSEVQGSINLSSQSSYQGIGLNNEENKRSQAVLMPPPSQLVAREPLRIDSTSEMASQVVSRRTSGSSSGASYMQPGGSPALDRTSYRGSGADESIEDSVYLITPDDTLGSADRLERSSAQFVGEFIEKSRDELLISEIHKEKNISEVDLLHEEKHGEHNLVDYRMKDHDSRLSSGSSGTKGPSDEMWHVMDSTTEQPPKTDDPEISAHSENAIVKRSGKSLWNVISDIVRLRWNSRAETSESALRSGGRNSPNESVSNETWFSGREHEETDNKKMERTTVSEFTYLDQLEEPNLSAQGQDLSDDKTAKSIYSEVDNTSFPNIMETKPSGGTLLVSGEAILTDGRKVDVISSGLDIEQSSLPLSTQGIRGSSIQEMFRSGKTDAFASSSADQLGHSSDATLSDISTTGTKDVEVKQRKLQRNKQVLKDRFDEWEEAYLLETEQRKIDEIFMREALAEAKKAADTWEVPVGAVLVKHGKIIARGCNLVEELRDSTAHAEMICIREASKQLKTWRLADTTLYVTLEPCPMCAGAILQARIENLVWGAPNKLLGADGSWIRLFPDGGEGNVSEQSEKSAAPVHPFHPKMTIRRGVLGSECADVMQQFFQLRRRKKQKKENTPPLAITHHPSKFITKMHNIFHILFCL 1349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 41846944 41852168 - XM_039035874.1 Bhi07g01388 39777

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 619 640 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 219 251 - -
Bhi07g01388 1349 Hamap tRNA-specific adenosine deaminase [tadA]. 1156 1314 IPR028883 GO:0002100|GO:0008251
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 967 984 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 274 302 - -
Bhi07g01388 1349 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1150 1272 IPR002125 -
Bhi07g01388 1349 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 902 1339 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 618 640 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 943 984 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 274 299 - -
Bhi07g01388 1349 SUPERFAMILY Cytidine deaminase-like 1135 1316 IPR016193 GO:0003824
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 758 796 - -
Bhi07g01388 1349 Pfam MafB19-like deaminase 1153 1252 IPR028883 GO:0002100|GO:0008251
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 943 966 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 341 370 - -
Bhi07g01388 1349 CDD nucleoside_deaminase 1168 1263 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 758 780 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 341 357 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 490 521 - -
Bhi07g01388 1349 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 902 1339 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 219 243 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 870 893 - -
Bhi07g01388 1349 Coils Coil 1121 1141 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 490 571 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 533 550 - -
Bhi07g01388 1349 MobiDBLite consensus disorder prediction 551 565 - -
Bhi07g01388 1349 Gene3D Cytidine Deaminase, domain 2 1140 1326 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01388 K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] - csv:101215576 2199.86
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00707 Bhi-Chr2:14240088 Bhi07g01388 Bhi-Chr7:41846944 4.45E-14 dispersed
Bhi02g00708 Bhi-Chr2:14240360 Bhi07g01388 Bhi-Chr7:41846944 1.99E-13 dispersed
Bhi02g01969 Bhi-Chr2:53344504 Bhi07g01388 Bhi-Chr7:41846944 1.19E-16 dispersed
Bhi07g01388 Bhi-Chr7:41846944 Bhi12g01844 Bhi-Chr12:59135799 5.12E-09 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g220 . . . . . . Bma14g01686 . . Cmo18g01080 . Cma18g01058 . Car18g00983 Sed08g1290 Cpe09g00259 . Bhi07g01388 Tan04g0923 Cmetu02g0302 Lac13g0441 Hepe10g1853 . . Cla05g02348 Cam05g2519 Cec05g2546 Cco05g2588 Clacu05g2514 Cmu05g2376 Cre05g2492 Cone13ag0870 Cone19ag0871 . . Lsi04g00307 Csa05g02561 Chy10g01101 Cme10g00309 . Blo11g00821 Bda07g01517 . Bpe11g01679 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010359 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32