Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01428 ATGTAATGGTTTTGTTGGAGCAGCAACCGTGGTTTAATGATCAAGAGCTCTCATTTTCATGCAAGTTTGGTTATAAATGCAGAACCTTTACTGTTGTAGCTTCCCTTTCACCATTGCTTAAATAACCCGTTTCTTTGTATATCTTTCCATTGCCTATATTTCTCTCTCTCTCTCTCTCTGTATTTGATGCAATAAAATCTTCCTTTTTCTGTGTGAGCATCTCTCTGTGGCGTGACAGAGCCAGAGGCTGAGGTTCTGAGCTGAAAATTTGAAAAAAGGGGTTTGAACATAAAGTCGAAATTCAATGGAATTTATTTGAAGAAAAGTTTGAATGGGACTATGGAGTACTGAAAATGGTACATTATCTGAAATGGGTATCTTTCTCTTGCTACTTTTGGTGCCGTTTTCTTTCCCAGTGTCTGTGATTCAGAAACTTGGTTTTTTTTTCTCTGCTCACACTCTGACTAGGGCTTTCAACGTCTATTTATTATGCTGAAATCAATGCTCTCTTCTCTGTTTTATCAGTTGACTGCCTTCTGTTTCTTTACACTCTATTCACCTCCTCTTTGAATTGTCGCTTTTTAATGTCTATTGGCTTTTGGAGGCCTTCATTTTTCTGCTTTTCAGTACTTCAACTTCCCTCTCCTTGCTTGGGAAATGGTAGCTTCATAAATATTGTCTTCTTTGCTTGCTACCATCTTCTTCTTTATGCACACTACTGATTTTGCTTCATTCTTCAAGCTTTTACTGTTACCACCTTCATATTCTTCCACCAGTGTGACTTGTGAGATTTCCCGTAATTTCTTGAATTGGGGGAGTTTGTATTAGCTTAAATTGTTATGTTCTTGTATATGTAGTTTCTCTTTTTCTATACTTCTTTGTGAAAAGTCCATAGATTCTGCCTGGAGTGAGTAGATTTTGAAGTTTGTATTTAAAAGCAACTCTAAAAGCTGGGTATCTTATACATGCTTCTTCTGGGTATCTTAGTCAACATAGTATGGATATTGATGACAGAGATAAATTTAGACTAGAAAGTAGCATAGAGGATTCTATTAACTGTTCGAATAGCATGTCATCGGATTGGCGATGCGGCGAAACGACTCTCATGAGTATGCCAATCGGTTTGGTTTTTCCAGGGAATGTGGATGTAGTTAGGAATCAGGATATGGTTGGTTGTTCTTCTTCCACTGCTCCTGTGGTAGAGTCATTTAGCTCTACCATCTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAACATTCAAGGCCATAACAACAACTCCAGTACTTCAAATACCATAGCAATTAGAAAGGCCAGTGGCTGTCCAGTTTCTTTGAGCAGTGACATTGATAGAACACTTGACATCAGCTGGAACCCATCACATAATATGTTAAAAGGGGGAGTTTACCTACCTAATATTCCCGGCGTGCTCCCGCCGAGCTTATCTCAACTTCCAGCTGATTCTTCATTTATCGAGCGTGCAGCCAGGTTTTCCTGCTTCAGTGGTGGAAATTTTGGTGATATTGTTGGCCATTTCAACATTCCTGAGCCTATGGGTGTTTTTTCCAGAGGCATGGGAGTAATCCCTGAGAGATGGGATGAGATTCCACGAAATGGGTTAGGTTTGGTATCCGGAACTGGAGGACAATCTCAAAGAAACATGGTTAACAGTGAATGTTCCAAGCCTGTTTCTTTGACTAATGAACATGGAGCTACTGAAAGGGGTTCACCTAAAAGTGGAAGCCCTTTGAAATTGGATGATCGTGGTAAACATGCTGTCGATGGTTCTGCTAATGAATCTGATGAAGCCGAGTTTAGCAGTGGTGATGGTTCGGGTGAGCCACGTACATTAGAGGCCACATGTAAGGAACTTTCTGCCAAGAGCCTTGGCTTGAGGAAAAGGAAACGAAGTGGACAGAAGATTGAACTCGATCGAGCCAATGGACCTCTGCAACAAACTATGATTTCAGCTAAGGATGCTGCTGAAACTCAGCGAAAAGGAGATCAAAATCCAAGTTCAACTGCAAACAAGGGTACAGGAAAACATGGTAAACAGGCATCTCAGCCTTCTGATCCACCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGGGGCCAGGCAACAAACAGCCATAGTCTTGCAGAGAGGGTAAGGAGGGAGAAGATCAGTGAGAGGATGAAGTTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTCACTGGAAAGGCAGTAATGCTAGATGAAATTATTAACTATGTCCAATCACTGCAACGACAAGTTGAGTTTTTATCAATGAAACTCGCTACCGTGAATCCAAGGTTGGATATTAACATCGATGGACACGTAGCCAAAGATATTCTTCAATCACGAGTTGGTCCATCGTCAACATTGGGATTTTCTTCGCATATGCCTGTTGCTTGCCCCCCGCCTCATATTTCTCATCATGGACATATCCCAAGCAATTTTCCTGCCATAGGGAGTTCTGAGATGTTAAGAAGCACAATGAATTCCCAGATGACTACAAGGTCTGGTGGATTTAAGGATCCTACTCAGATAAAGAATGTGTGGGATGGTGAACTCCAAAATATTGTGCAGATGAGCTTTGGGATGTCCACTACCCCCAATTGTTTAGAAGTTCAAGGTGCATTGTATTAGTCTTAGTATGAGATTCATTGCCGGCGAACTATTTCTACTTCGTGGTAATGCGAAAGAAGTTGTGAGATTTAGTTGTCCATTCTACTTCGTGGTAATGTGAAAGAAGTTGCGAGATTTAGTTGTCCAATGTGATATAAGAAATACCATTACTGTATTTGGAGCTGCGTTACTCTAGCTGGTGACTGATTCGGACCGGCTGATACTAACCAAGGCAGAAAATCGCCCCATGACAATGCCCAGAAATCAATGACCTGGTAGAGAAAATAGTTTCCGATCTCGTTAGTTCATAATATAGGAGTCTTTGCCTTAGTCGATGTATAGAGGTCGAGGAATCGATATCTGAAAACCGAGGAACCACTTGAGCTTAGTGTGTCTTCTTGTTAAGAAAATGAGAGAACAGATGATAGTGTATGGTTCCACTAGTTGAAGTGGGTTGGCTGTAATTTTTACAACTATGCTGAGGGAAATGCTGTTGTTAAGTGTGAATGAATTTGCGTTTTGACGCTGAGATCCATGAAACATCTTTTAGCTTACTCAGCAACTGATGAGTTTCTACTGTATCAATCATGAAATGACCTGGCTTTCATGGTTGATGCAGGAGGAAAGGGTCATTTTCTCAAGTATCACCTATAAATCTATAATGAAAGTTTGAGCCACTTGTCAAAGATAACTCACTTTAATATTATTTTTTAATTAAGAAAGAAGCAATATTCATGAAA 3381 40.43 MDIDDRDKFRLESSIEDSINCSNSMSSDWRCGETTLMSMPIGLVFPGNVDVVRNQDMVGCSSSTAPVVESFSSTIWEQAANCQNLGICNIQGHNNNSSTSNTIAIRKASGCPVSLSSDIDRTLDISWNPSHNMLKGGVYLPNIPGVLPPSLSQLPADSSFIERAARFSCFSGGNFGDIVGHFNIPEPMGVFSRGMGVIPERWDEIPRNGLGLVSGTGGQSQRNMVNSECSKPVSLTNEHGATERGSPKSGSPLKLDDRGKHAVDGSANESDEAEFSSGDGSGEPRTLEATCKELSAKSLGLRKRKRSGQKIELDRANGPLQQTMISAKDAAETQRKGDQNPSSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGHVAKDILQSRVGPSSTLGFSSHMPVACPPPHISHHGHIPSNFPAIGSSEMLRSTMNSQMTTRSGGFKDPTQIKNVWDGELQNIVQMSFGMSTTPNCLEVQGALY 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42380488 42384978 + XM_039037168.1 Bhi07g01428 39817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01428 554 MobiDBLite consensus disorder prediction 298 312 - -
Bhi07g01428 554 MobiDBLite consensus disorder prediction 336 356 - -
Bhi07g01428 554 MobiDBLite consensus disorder prediction 213 244 - -
Bhi07g01428 554 Pfam Helix-loop-helix DNA-binding domain 379 427 IPR011598 GO:0046983
Bhi07g01428 554 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 376 426 IPR011598 GO:0046983
Bhi07g01428 554 SMART finulus 382 432 IPR011598 GO:0046983
Bhi07g01428 554 MobiDBLite consensus disorder prediction 298 364 - -
Bhi07g01428 554 CDD bHLH_AtBPE_like 366 449 - -
Bhi07g01428 554 MobiDBLite consensus disorder prediction 209 286 - -
Bhi07g01428 554 PANTHER TRANSCRIPTION FACTOR BHLH49 17 552 - -
Bhi07g01428 554 MobiDBLite consensus disorder prediction 250 268 - -
Bhi07g01428 554 Gene3D - 373 446 IPR036638 GO:0046983
Bhi07g01428 554 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 17 552 IPR024097 GO:0006355
Bhi07g01428 554 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 374 444 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01428 Bhi-Chr7:42380488 Bhi07g01430 Bhi-Chr7:42380490 0 dispersed
Bhi07g01428 Bhi-Chr7:42380488 Bhi07g01429 Bhi-Chr7:42380488 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1572 PF00010 HLH 6.20E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01428 - - bhj:120081983 1098.96