Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01429 ATGTAATGGTTTTGTTGGAGCAGCAACCGTGGTTTAATGATCAAGAGCTCTCATTTTCATGCAAGTTTGGTTATAAATGCAGAACCTTTACTGTTGTAGCTTCCCTTTCACCATTGCTTAAATAACCCGTTTCTTTGTATATCTTTCCATTGCCTATATTTCTCTCTCTCTCTCTCTCTGTATTTGATGCAATAAAATCTTCCTTTTTCTGTGTGAGCATCTCTCTGTGGCGTGACAGAGCCAGAGGCTGAGGTTCTGAGCTGAAAATTTGAAAAAAGGGGTTTGAACATAAAGTCGAAATTCAATGGAATTTATTTGAAGAAAAGTTTGAATGGGACTATGGAGTACTGAAAATGGTACATTATCTGAAATGGGTATCTTTCTCTTGCTACTTTTGGTGCCGTTTTCTTTCCCAGTGTCTGTGATTCAGAAACTTGGTTTTTTTTTCTCTGCTCACACTCTGACTAGGGCTTTCAACGTCTATTTATTATGCTGAAATCAATGCTCTCTTCTCTGTTTTATCAGTTGACTGCCTTCTGTTTCTTTACACTCTATTCACCTCCTCTTTGAATTGTCGCTTTTTAATGTCTATTGGCTTTTGGAGGCCTTCATTTTTCTGCTTTTCAGTACTTCAACTTCCCTCTCCTTGCTTGGGAAATGGTAGCTTCATAAATATTGTCTTCTTTGCTTGCTACCATCTTCTTCTTTATGCACACTACTGATTTTGCTTCATTCTTCAAGCTTTTACTGTTACCACCTTCATATTCTTCCACCAGTGTGACTTGTGAGATTTCCCGTAATTTCTTGAATTGGGGGAGTTTGTATTAGCTTAAATTGTTATGTTCTTGTATATGTAGTTTCTCTTTTTCTATACTTCTTTGTGAAAAGTCCATAGATTCTGCCTGGAGTGAGTAGATTTTGAAGTTTGTATTTAAAAGCAACTCTAAAAGCTGGGTATCTTATACATGCTTCTTCTGGGTATCTTAGTCAACATAGTATGGATATTGATGACAGAGATAAATTTAGACTAGAAAGTAGCATAGAGGATTCTATTAACTGTTCGAATAGCATGTCATCGGATTGGCGATGCGGCGAAACGACTCTCATGAGTATGCCAATCGGTTTGGTTTTTCCAGGGAATGTGGATGTAGTTAGGAATCAGGATATGGTTGGTTGTTCTTCTTCCACTGCTCCTGTGGTAGAGTCATTTAGCTCTACCATCTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAACATTCAAGGCCATAACAACAACTCCAGTACTTCAAATACCATAGCAATTAGAAAGGCCAGTGGCTGTCCAGTTTCTTTGAGCAGTGACATTGATAGAACACTTGACATCAGCTGGAACCCATCACATAATATGTTAAAAGGGGGAGTTTACCTACCTAATATTCCCGGCGTGCTCCCGCCGAGCTTATCTCAACTTCCAGCTGATTCTTCATTTATCGAGCGTGCAGCCAGGTTTTCCTGCTTCAGTGGTGGAAATTTTGGTGATATTGTTGGCCATTTCAACATTCCTGAGCCTATGGGTGTTTTTTCCAGAGGCATGGGAGTAATCCCTGAGAGATGGGATGAGATTCCACGAAATGGGTTAGGTTTGGTATCCGGAACTGGAGGACAATCTCAAAGAAACATGGTTAACAGTGAATGTTCCAAGCCTGTTTCTTTGACTAATGAACATGGAGCTACTGAAAGGGGTTCACCTAAAAGTGGAAGCCCTTTGAAATTGGATGATCGTGGTAAACATGCTGTCGATGGTTCTGCTAATGAATCTGATGAAGCCGAGTTTAGCAGTGGTGATGGTTCGGGTGAGCCACGTACATTAGAGGCCACATGTAAGGAACTTTCTGCCAAGAGCCTTGGCTTGAGGAAAAGGAAACGAAGTGGACAGATTGAACTCGATCGAGCCAATGGACCTCTGCAACAAACTATGATTTCAGCTAAGGATGCTGCTGAAACTCAGCGAAAAGGAGATCAAAATCCAAGTTCAACTGCAAACAAGGGTACAGGAAAACATGGTAAACAGGCATCTCAGCCTTCTGATCCACCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGGGGCCAGGCAACAAACAGCCATAGTCTTGCAGAGAGGGTAAGGAGGGAGAAGATCAGTGAGAGGATGAAGTTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTCACTGGAAAGGCAGTAATGCTAGATGAAATTATTAACTATGTCCAATCACTGCAACGACAAGTTGAGTTTTTATCAATGAAACTCGCTACCGTGAATCCAAGGTTGGATATTAACATCGATGGACACGTAGCCAAAGATATTCTTCAATCACGAGTTGGTCCATCGTCAACATTGGGATTTTCTTCGCATATGCCTGTTGCTTGCCCCCCGCCTCATATTTCTCATCATGGACATATCCCAAGCAATTTTCCTGCCATAGGGAGTTCTGAGATGTTAAGAAGCACAATGAATTCCCAGATGACTACAAGGTCTGGTGGATTTAAGGATCCTACTCAGATAAAGAATGTGTGGGATGGTGAACTCCAAAATATTGTGCAGATGAGCTTTGGGATGTCCACTACCCCCAATTGTTTAGAAGTTCAAGGATCTGATTCACCTAGCAATACAAAAGTTGAACAGTGAAATTTCTTCTTGATTGCCATGAACCATTTCTGCTTCATGTACAGGTGCATTGTATTAGTCTTAGTATGAGATTCATTGCCGGCGAACTATTTCTACTTCGTGGTAATGCGAAAGAAGTTGTGAGATTTAGTTGTCCATTCTACTTCGTGGTAATGTGAAAGAAGTTGCGAGATTTAGTTGTCCAATGTGATATAAGAAATACCATTACTGTATTTGGAGCTGCGTTACTCTAGCTGGTGACTGATTCGGACCGGCTGATACTAACCAAGGCAGAAAATCGCCCCATGACAATGCCCAGAAATCAATGACCTGGTAGAGAAAATAGTTTCCGATCTCGTTAGTTCATAATATAGGAGTCTTTGCCTTAGTCGATGTATAGAGGTCGAGGAATCGATATCTGAAAACCGAGGAACCACTTGAGCTTAGTGTGTCTTCTTGTTAAGAAAATGAGAGAACAGATGATAGTGTATGGTTCCACTAGTTGAAGTGGGTTGGCTGTAATTTTTACAACTATGCTGAGGGAAATGCTGTTGTTAAGTGTGAATGAATTTGCGTTTTGACGCTGAGATCCATGAAACATCTTTTAGCTTACTCAGCAACTGATGAGTTTCTACTGTATCAATCATGAAATGACCTGGCTTTCATGGTTGATGCAGGAGGAAAGGGTCATTTTCTCAAGTATCACCTATAAATCTATAATGAAAGTTTGAGCCACTTGTCAAAGATAACTCACTTTAATATTATTTTTTAATTAAGAAAGAAGCAATATTCATGAAA 3460 40.35 MDIDDRDKFRLESSIEDSINCSNSMSSDWRCGETTLMSMPIGLVFPGNVDVVRNQDMVGCSSSTAPVVESFSSTIWEQAANCQNLGICNIQGHNNNSSTSNTIAIRKASGCPVSLSSDIDRTLDISWNPSHNMLKGGVYLPNIPGVLPPSLSQLPADSSFIERAARFSCFSGGNFGDIVGHFNIPEPMGVFSRGMGVIPERWDEIPRNGLGLVSGTGGQSQRNMVNSECSKPVSLTNEHGATERGSPKSGSPLKLDDRGKHAVDGSANESDEAEFSSGDGSGEPRTLEATCKELSAKSLGLRKRKRSGQIELDRANGPLQQTMISAKDAAETQRKGDQNPSSTANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGHVAKDILQSRVGPSSTLGFSSHMPVACPPPHISHHGHIPSNFPAIGSSEMLRSTMNSQMTTRSGGFKDPTQIKNVWDGELQNIVQMSFGMSTTPNCLEVQGSDSPSNTKVEQ 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42380488 42384978 + XM_039037167.1 Bhi07g01429 39818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01429 561 MobiDBLite consensus disorder prediction 314 328 - -
Bhi07g01429 561 MobiDBLite consensus disorder prediction 213 244 - -
Bhi07g01429 561 Pfam Helix-loop-helix DNA-binding domain 378 426 IPR011598 GO:0046983
Bhi07g01429 561 SMART finulus 381 431 IPR011598 GO:0046983
Bhi07g01429 561 MobiDBLite consensus disorder prediction 298 363 - -
Bhi07g01429 561 MobiDBLite consensus disorder prediction 209 286 - -
Bhi07g01429 561 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 375 425 IPR011598 GO:0046983
Bhi07g01429 561 CDD bHLH_AtBPE_like 365 448 - -
Bhi07g01429 561 Gene3D - 372 445 IPR036638 GO:0046983
Bhi07g01429 561 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 373 443 IPR036638 GO:0046983
Bhi07g01429 561 MobiDBLite consensus disorder prediction 250 268 - -
Bhi07g01429 561 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 17 560 IPR024097 GO:0006355
Bhi07g01429 561 MobiDBLite consensus disorder prediction 335 355 - -
Bhi07g01429 561 PANTHER TRANSCRIPTION FACTOR BHLH49 17 560 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01429 Bhi-Chr7:42380488 Bhi07g01432 Bhi-Chr7:42380492 0 dispersed
Bhi09g01293 Bhi-Chr9:31785094 Bhi07g01429 Bhi-Chr7:42380488 5.87E-43 dispersed
Bhi11g02669 Bhi-Chr11:71875136 Bhi07g01429 Bhi-Chr7:42380488 2.61E-44 dispersed
Bhi07g01428 Bhi-Chr7:42380488 Bhi07g01429 Bhi-Chr7:42380488 0 tandem
Bhi07g01429 Bhi-Chr7:42380488 Bhi07g01430 Bhi-Chr7:42380490 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1573 PF00010 HLH 6.30E-06 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01429 - - bhj:120081983 1113.21