Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01472 CCCCCATTTTTCTTCATCATTCATCATCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATTAATTAATTATGAGCAACTCCAACTCCGACGACAAATCTTCCATGGATTTGGTTCAACCATCTGAGCATCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACGGTAAAATGTGGTCATTGTAGTAATCTCTCGTTCTTGAGCACAAGACCTCCTCTACAAGGTCAATGTATTGACCATCCCCTAAGTTTTCAGGTTGGATTCTCTAATGATATTCGAAAGGGCGCTTCCACATCGTCCACTTCCACGTCCTCTTCCTTGACTAACGAGTCCCCTTCTCCAAATTTTGTTGTTAAACCACCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTTATGAAAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTTAGTGCAGCAGCAAAGAACTGGGCAAGGTATATTCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCACAACAAAGAATGAAAAGGGTTTAGGGTACCAGAAGAATCGGACAAATCGAATGGCTGTCCTAGGGTTTGATGAAGTTAAGATTTGGCCATGTCTTTGTCTCGGTCTTTTTGTTTCTTCCTCGTA 717 42.12 MSNSNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNKE 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43206383 43209683 - XM_039037416.1 Bhi07g01472 39861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01472 173 MobiDBLite consensus disorder prediction 87 116 - -
Bhi07g01472 173 CDD HMGB-UBF_HMG-box 118 154 - -
Bhi07g01472 173 MobiDBLite consensus disorder prediction 87 107 - -
Bhi07g01472 173 SUPERFAMILY HMG-box 104 155 IPR036910 -
Bhi07g01472 173 Gene3D High mobility group box domain 106 160 IPR036910 -
Bhi07g01472 173 PANTHER PROTEIN CRABS CLAW 10 171 - -
Bhi07g01472 173 Pfam YABBY protein 17 157 IPR006780 GO:0007275
Bhi07g01472 173 PANTHER PROTEIN YABBY 6-RELATED 10 171 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01472 Bhi-Chr7:43206383 Bhi12g00406 Bhi-Chr12:13603558 3.62E-41 dispersed
Bhi07g01472 Bhi-Chr7:43206383 Bhi07g01473 Bhi-Chr7:43206383 1.35E-127 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1577 PF04690 YABBY 2.50E-52 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01472 K25796 - csv:101219863 298.516