Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi07g01473 | CCCCCATTTTTCTTCATCATTCATCATCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATTAATTAATTATGAGCAACTCCAACTCCGACGACAAATCTTCCATGGATTTGGTTCAACCATCTGAGCATCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACGGTAAAATGTGGTCATTGTAGTAATCTCTCGTTCTTGAGCACAAGACCTCCTCTACAAGGTCAATGTATTGACCATCCCCTAAGTTTTCAGTCTCAGGTTGGATTCTCTAATGATATTCGAAAGGGCGCTTCCACATCGTCCACTTCCACGTCCTCTTCCTTGACTAACGAGTCCCCTTCTCCAAATTTTGTTGTTAAACCACCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTTATGAAAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTTAGTGCAGCAGCAAAGAACTGGGCAAGGTATATTCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCACAACAAAGAATGAAAAGGGTTTAGGGTACCAGAAGAATCGGACAAATCGAATGGCTGTCCTAGGGTTTGATGAAGTTAAGATTTGGCCATGTCTTTGTCTCGGTCTTTTTGTTTCTTCCTCGTA | 723 | 42.19 | MSNSNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQSQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNKE | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 43206383 | 43209683 | - | XM_039037415.1 | Bhi07g01473 | 39862 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi07g01473 | 175 | CDD | HMGB-UBF_HMG-box | 120 | 156 | - | - | |
Bhi07g01473 | 175 | Pfam | YABBY protein | 17 | 159 | IPR006780 | GO:0007275 | |
Bhi07g01473 | 175 | PANTHER | PROTEIN CRABS CLAW | 10 | 173 | - | - | |
Bhi07g01473 | 175 | MobiDBLite | consensus disorder prediction | 87 | 118 | - | - | |
Bhi07g01473 | 175 | PANTHER | PROTEIN YABBY 6-RELATED | 10 | 173 | IPR006780 | GO:0007275 | |
Bhi07g01473 | 175 | SUPERFAMILY | HMG-box | 106 | 157 | IPR036910 | - | |
Bhi07g01473 | 175 | MobiDBLite | consensus disorder prediction | 87 | 109 | - | - | |
Bhi07g01473 | 175 | Gene3D | High mobility group box domain | 108 | 162 | IPR036910 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi07g01473 | Bhi-Chr7:43206383 | Bhi12g00406 | Bhi-Chr12:13603558 | 2.75E-41 | dispersed | |
Bhi07g01472 | Bhi-Chr7:43206383 | Bhi07g01473 | Bhi-Chr7:43206383 | 1.35E-127 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1578 | PF04690 | YABBY | 1.10E-55 | CL0114 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi07g01473 | K25796 | - | csv:101219863 | 306.99 |