Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01473 CCCCCATTTTTCTTCATCATTCATCATCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATCTTCTTCATTAATTAATTATGAGCAACTCCAACTCCGACGACAAATCTTCCATGGATTTGGTTCAACCATCTGAGCATCTCTGTTATGTCAAATGCAACTTCTGCAACACTGTTCTTGCGGTTGGGATTCCATGCAGACGTTTATTGGATACGGTGACGGTAAAATGTGGTCATTGTAGTAATCTCTCGTTCTTGAGCACAAGACCTCCTCTACAAGGTCAATGTATTGACCATCCCCTAAGTTTTCAGTCTCAGGTTGGATTCTCTAATGATATTCGAAAGGGCGCTTCCACATCGTCCACTTCCACGTCCTCTTCCTTGACTAACGAGTCCCCTTCTCCAAATTTTGTTGTTAAACCACCTGAGAAGAAACACAGACTCCCATCTGCTTACAATCGTTTTATGAAAGAGGAGATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTTAGTGCAGCAGCAAAGAACTGGGCAAGGTATATTCCAAATTCAGCTGCTGGGTCGGTTTCTGGAACTCACAACAAAGAATGAAAAGGGTTTAGGGTACCAGAAGAATCGGACAAATCGAATGGCTGTCCTAGGGTTTGATGAAGTTAAGATTTGGCCATGTCTTTGTCTCGGTCTTTTTGTTTCTTCCTCGTA 723 42.19 MSNSNSDDKSSMDLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQSQVGFSNDIRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNKE 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43206383 43209683 - XM_039037415.1 Bhi07g01473 39862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01473 175 CDD HMGB-UBF_HMG-box 120 156 - -
Bhi07g01473 175 Pfam YABBY protein 17 159 IPR006780 GO:0007275
Bhi07g01473 175 PANTHER PROTEIN CRABS CLAW 10 173 - -
Bhi07g01473 175 MobiDBLite consensus disorder prediction 87 118 - -
Bhi07g01473 175 PANTHER PROTEIN YABBY 6-RELATED 10 173 IPR006780 GO:0007275
Bhi07g01473 175 SUPERFAMILY HMG-box 106 157 IPR036910 -
Bhi07g01473 175 MobiDBLite consensus disorder prediction 87 109 - -
Bhi07g01473 175 Gene3D High mobility group box domain 108 162 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01473 Bhi-Chr7:43206383 Bhi12g00406 Bhi-Chr12:13603558 2.75E-41 dispersed
Bhi07g01472 Bhi-Chr7:43206383 Bhi07g01473 Bhi-Chr7:43206383 1.35E-127 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1578 PF04690 YABBY 1.10E-55 CL0114 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01473 K25796 - csv:101219863 306.99