Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01576 TTACACAAACACTAAAAAAAAGTCCACATATATTCAGACAAAACCCTAATTTAAGTCCCTTTAAGGGAAAAAAAAAAAAGAAAGAAAAGAAAAAAAATATTGTTTTTGGGTTATTGATAGAAATACCACTCATTATTTTTGTTGCTTAAAGCCTTGCTTGCCCACATCCCCTTATGTTGTGCGTGGATATGAAAAGGAGAAAAGTTTTTGAGAGACAGAGGCTATGGCAATTGGCAACTCCCATCTGAAAGGAAATTCCCATATATGAGAGAGAAGAAAGAGACCCACTATGTGATACCATCCAAGGGTCAGCTACTACAGATCATGTACTACTAGAAGGGGAAAAAAAAAAAAAAGACAAAAGATTGTCTACACATATGATCATGGATGGTGAAAATGGGATCCGAAGACCTAATTTTCCATTACAATTGTTGGAGAAGAAAAAGGAAGAACAACCACAACAGCCATGTTCCTCCTCCGCAAACAACGGAGAAACAACAACGATGGCAATAACAACAACTCCAAATCCAAATCTTCAAATTTCGAAGCCACCTCCCAAAAGGGCCACCACCAAAGACCGTCACACGAAAGTTGACGGTCGTGGCCGTCGGATTCGGATGCCTGCCCTTTGTGCTGCTAGGGTTTTTCAACTCACTAGAGAGCTCGGTCACAAATCCGACGGCGAAACCATCGAGTGGCTTCTACAACAGGCTGAGCCTGCCGTTATCGCTGCCACCGGTACCGGCACCATTCCAGCTAATTTCACTTCGCTTAATATCTCTCTTCGTAGCTCTGGCTCCACCATCTCCGCTCCTTCTCATCTACGGACGAGTTATTTCAGTCCCACCCAATTCGCCGTCAGAACAATATCCGATCTTTGGGATAGAAACAACAATCATAATCATACTCTCATCGAAGATTCGTCTACATTCTTGAATTTCAACTCTCATAATTATGCGAGCGCCTTCAAGCAAGATCAAGGTGGAATTGACGTCATGGAAGCGGGAAAAAAACGGCGGTCGGAGCAGTTGGAATCGTCGTCAGAGAATTATTTAGTTCAAACCAGTACCGGGTCGATTCCGGCCAGTCAAAGCAGTGCGTTACCAGCGACATTTTGGATGGTAACGAATCCGAGCAATCAGGGGAGTGATCCGATGTGGACATTTCCGTCGGTGGGTAACAGCAGCATGTTGAGAGGGGCGGGCTGGCGGGGCGGCGGCGGAGGGTTTCATTTCATGAATCTGCCACCACAANNTGGCACTTTGCCAAGTGGGCAACAGTTGGGGACAGGGATCGGGAGTGGCGGTGGTCCGGCGACGGAGAGCCACTTGGGGATGTTGGCGGCTCTAAGTGCTTATAGAACAACGATGCCGGGATTGTCCATTTCAGAATCGCCAACTTCTAATAATCCTAATCAATCATAGACCCAACAACAACATCTCAACAATCTGTATGCTTGCTGAATTTCCAATCCTAATATTATACTTTCTTTTTTTTTTTTCTCTACTCATTCATTTTCTCACTAAATATACATATCATATTAAATATGAGTTATGCAATTTTACCACAATAGGATTACAGGTATGTTATTGAGAAGAAAAAAAAAAAGGAGTGATTTTTATTTTTTATTGCAGTTTGTGTATTGAGTTTCCATTTAAAAGTGCAATTTTTTTTAGTGTTATAGTAGTATGGATGGATTTGGTAAGTAATTAAAGCTTTTGAGAAGCGAAAACATGAAAAAAGGCTTGGATTTGGCTTTGTATTTT 1766 42.02 MIMDGENGIRRPNFPLQLLEKKKEEQPQQPCSSSANNGETTTMAITTTPNPNLQISKPPPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTISAPSHLRTSYFSPTQFAVRTISDLWDRNNNHNHTLIEDSSTFLNFNSHNYASAFKQDQGGIDVMEAGKKRRSEQLESSSENYLVQTSTGSIPASQSSALPATFWMVTNPSNQGSDPMWTFPSVGNSSMLRGAGWRGGGGGFHFMNLPPQXGTLPSGQQLGTGIGSGGGPATESHLGMLAALSAYRTTMPGLSISESPTSNNPNQS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45137800 45139563 + XM_039037358.1 Bhi07g01576 39965

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01576 348 PANTHER TRANSCRIPTION FACTOR TCP23 11 343 - -
Bhi07g01576 348 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 343 IPR005333 GO:0003700
Bhi07g01576 348 MobiDBLite consensus disorder prediction 283 314 - -
Bhi07g01576 348 ProSiteProfiles TCP domain profile. 65 119 IPR017887 -
Bhi07g01576 348 Pfam TCP family transcription factor 64 195 IPR017887 -
Bhi07g01576 348 MobiDBLite consensus disorder prediction 293 307 - -
Bhi07g01576 348 MobiDBLite consensus disorder prediction 61 77 - -
Bhi07g01576 348 MobiDBLite consensus disorder prediction 28 52 - -
Bhi07g01576 348 MobiDBLite consensus disorder prediction 1 77 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01576 - - - bhj:120082121 659.833
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01576 Bhi-Chr7:45137800 Bhi12g02424 Bhi-Chr12:76496895 1.67E-36 dispersed
Bhi01g01375 Bhi-Chr1:27721588 Bhi07g01576 Bhi-Chr7:45137800 1.45E-32 transposed
Bhi03g01548 Bhi-Chr3:33295457 Bhi07g01576 Bhi-Chr7:45137800 9.84E-37 transposed
Bhi07g01106 Bhi-Chr7:34862439 Bhi07g01576 Bhi-Chr7:45137800 1.64E-41 transposed
Bhi08g02014 Bhi-Chr8:57971965 Bhi07g01576 Bhi-Chr7:45137800 1.44E-64 transposed
Bhi10g00505 Bhi-Chr10:11466028 Bhi07g01576 Bhi-Chr7:45137800 1.98E-26 transposed
Bhi12g01178 Bhi-Chr12:34894260 Bhi07g01576 Bhi-Chr7:45137800 4.28E-40 transposed
Bhi02g00330 Bhi-Chr2:6136733 Bhi07g01576 Bhi-Chr7:45137800 5.02E-93 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g894 . Blo16g01121 . Bda11g01222 Bpe13g01416 . . Bma15g00272 Cmo04g01729 Cmo18g01183 . Cma18g01160 . Car18g01068 Sed06g1538 . Cpe01g01458 Bhi07g01576 Tan04g1091 Cmetu10g1669 Lac13g0309 Hepe10g1732 . . Cla05g02451 Cam05g2637 Cec05g2670 Cco05g2708 Clacu05g2640 Cmu05g2494 Cre05g2607 . Cone19ag0952 . . Lsi04g00434 Csa05g02440 Chy10g00992 Cme10g00425 . . . Bda11g01222 . . . Bma06g00680 . . . . . Car04g01690 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi12g01178 . 43 260 TCP Transcription Factor Family AT5G23280 64.0 7.9e-66 248.1
Bhi07g01106 . 39 261 TCP Transcription Factor Family AT5G23280 62.4 2.3e-65 246.5
Bhi07g01576 . 57 156 TCP Transcription Factor Family AT3G47620 89.2 8.3e-43 172.6
Bhi08g02014 . 38 138 TCP Transcription Factor Family AT3G47620 82.2 2.5e-39 161.0
Bhi01g02112 . 37 277 TCP Transcription Factor Family AT3G27010 58.1 9.0e-59 224.9
Bhi01g02113 . 37 277 TCP Transcription Factor Family AT3G27010 58.1 9.0e-59 224.9
Bhi01g02114 . 37 277 TCP Transcription Factor Family AT3G27010 58.1 9.0e-59 224.9
Bhi12g02424 . 26 254 TCP Transcription Factor Family AT3G27010 52.4 7.4e-53 205.3
Bhi12g01178 . 31 261 TCP Transcription Factor Family AT5G08330 60.9 1.1e-64 244.2
Bhi07g01106 . 9 259 TCP Transcription Factor Family AT5G08330 56.8 1.4e-64 243.8
Bhi02g00091 CCT 35 136 TCP Transcription Factor Family AT5G60970 73.8 7.0e-39 159.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000689 5 3 3 4 4 3 5 3 3 3 3 3 3 3 3 5 3 2 4 3 3 3 3 3 3 3 3 4 3 2 98
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1592 PF03634 TCP 3.10E-38 No_clan Bhi TF