Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01600 CGTCTGTTTATAAGCAACGGAAATAGAAAAACAGCCGAAGCTGGGCCACAAAAAATATCAATATTAGTAAATAACTGTTTTAACCGTTCAAATGGGAAACGGTTCTCCCTTCTTCCCGCCATGAACGACCTTCTCCAACCCCTCATCTTCCTCTGTTTTCCTTTTTAACATCTTCATAAAACCCTCTTCTTGCCCATCATACAATTGTCTCCGATCCTCAAGCGAATCCTTTTGTGTTTCGCTTGAGGTTTAAATTCCTTTAACCATTGTTAAGGCTGACCCAATCTCACAACAACAATTCATCATCATCCCGTAAAAATGGCTATACTTCGGCTGCTGCTAACATTGTCCTTTCTGGCTTCTACCGCATTTGCTAACATCGGAAACGTAGATGACTACTGGAAAGCACGTGCCGCTGAGGCCGAACAAGCCGCCGCGGATGCCTTCGAGCCTAATCCTGAGAACGTCACCAACTACTTCAATGCCAAAGTTGGCCAGGTATTGATTGGAACCAACAGTACGAGGAGGAATTTGAAGAAATATACAGGCCCATGTCTAGCCACTAATCCCATTGATCGGTGCTGGAGATGCGACCCCAATTGGGCCCAGAACCGGAAGAAGCTAGCAGATTGTGTTCTGGGTTTTGGCCACAAGACCATTGGTGGAAAGTTGGGTCCATACTACGTCGTGAATGACTCGTCGGACTCGGACCTCATGAACCCGAAACCTGGGACTCTTCGTCATGCTGTGATCCAAAAGGGACCTCTGTGGATCATCTTCTCTACCAACATGGCCATTAGGCTCACTCAGGAGCTCATCATGACCAGCGACAAGACCATTGATGCAAGAGGGGCTAATGTTCAGATTGCTTATGGGGCTGGCATTACTCTTCAGTACATCAAAAATGTCATCATTCATGGCCTTCGTATCCATCACATTGTCGTAGGTAGTGGCGGAATGATTAGAGATGCCGTCGATCATGTGGGTTTGAGGACTATGAGCGATGGTGACGGAATTTCCATCTTCGGTTCCTCCAACGTTTGGATCGACCATGTTTCTATGTCCAGGTGTCATGATGGTCTCATTGATGCCATTATGGGATCCACTGCCATCACTATATCCAATTGTCACTTCACTCACCACAATGAGGTGATGTTGTTTGGAGCGAGTGACGGGTACTCGAACGATCAAATAATGCAAGTGACAGTAGCATTCAACCACTTTGGTCAAGGATTGGTGCAGAGGATGCCGAGGTGCCGATGGGGATTCTTCCATGTTGTCAACAACGACTACACTCATTGGCTTATGTATGCCATTGGTGGTAGCCAGCATCCCACCATCATCAGCCAGGGAAATCGCTTCATTGCTCCTCCCAATGTATATGCTAAAGAGGTGACAAAGAGAGAGTACTCACCAGAGGAGGTTTGGAAAAGCTGGACATGGAGATCAGAGGGAGACTTGATGATGAATGGAGCATTCTTTGTTACCTCAGGCGATCAAAGCAAGAGAAGACCCTTCTCAAGGATGGATATGATCTCATACAAACCAGGGACATACGTTAGAAGAATGACACGTTTTGCAGGAGCGCTTGCCTGCTTCGTCGGTCGCCCTTGCTAAATTCAACTCCCAATTTTCTACCACACATCACCGTCAACAAACAGATTCATGATACTAATTTTTGGGATCAACTGCTCAACTCACAAGCTTAGTTTTTCTTTTTTGGCTGTGTCGACTGATTTGGGTGAAGCCATAAACAAACATATCACATTCTGTATACTCTGTGGCTTTCAAGATCTCTCATATAACTGAACTTATTTTATGATAATCTCTTTTCTATTTTCATGTTTACTTCCTTCTAGTTACCATGAAAATAATAAACATTTATGATTACTGGATTTTTAAACGGTGAAGAAAGTTATACACATGGGGGAAATGAACTGTTTCGGAAGAATCTACCAAATGTTAAATTAGATAAACGTAAATTTGAGGAGCATTCTAAAATATAATGTAACAACTTTATCCGCTTGATTTGATAGAGCTCTACTTGCTTGCTGCATCTCAAGTACTCTTGGTTCAATCTGAAGATTCATCTACAAAACTCACTAACTTTTGTTCGAAATCACTGAGGATATACCCACACGATTATGTTTAGACCATAACTCTGATACCAATTAATAAGGACTATGAAACCTCTACCAATCTCCACAATAGTATGATATTGTCTATTTTGGACATGAAATTTTCATGACTTTACTTTTGGAACCATCCAAAAGGCCTCGTACTAATGGAAAAAATCGATTTCTCTCTTTTCCAACTAACTTTGTTTGCACCTAAAAACCCTTACATATCATTGATTTTGTAGAATCTAGAGGTAAACTGAATTTCTCAATACTAAGGTTTATTTGTGTGAAGGAGTAACCAATTTCTCAAAGTATAATATGAATACTGTAATCCAGTAACATTGTTGCACATTAGCGAGCATCAATTACTTCTTCCACATGCATACACTAATAATCTGAAAGCAGAGGAAGGATCAAGAAGAAACCAAAGTCTTAAAACCTGAGCAGGGCTCTTGGTTGGTCTTCTATAAAATCTGTTGAAAGTGTTTCAGTAAGTTCTTGAAGAGCCTGAAAGAGTAATTGAGACACTTACAAACAACTGAACAAGTAATAAATATTAAACCAATACAAGGACACTTATGCTAGCGTCCATTTGATGCTTTTTCAGTGCATTTGAGAAATAAATGCCGATCATAGAAAGTTTTGAAAGGTCAATTTGTGCTTAGGAATAAACCAATTGGGGGATGCTGCATATTGTATATAGGCCTTCAGTTTCCAGATGCGCCAGCAGCCGTGCAAGCAATGGGATGGATGATGGATACAAATATTAGTTTCATAGGAAAGCATGAAGTCGAGAATCGGATACATTATATAACATCAGTTCCAAGAACTGATTCAAGTACTTAAATTGATCACATATGATAAATATGTGAAAAGTTGAAGAAATATAAGTTAGGTTCTTGTTTTTGTATGGATGACCTAAACTTTTTTTAAAAAAATGAAATTTGATCCGTTTTTTTAAAAACATAACTTTCGAACCTTTTGTTAGCATCATATAGGGTTCTTTTTTTTTTTTAATGATTATTTTTTTTCCTTATCTCTTATTCTAGTTCTAGCTTACTTTTTAGTTCACTTTCTTGCTCTTACTCTTTACATATTAGTTCATTTGACATTTGAAAAAACTCCATTTATTGTCAACTACTGTCGCACATTGTTAAAGGGAGAAGAAACAACTCTGGACGAGAGCATAGTCATTGCTAGAGACAGAATTCAAAGAAGGAATCACATGAAGGAGAGAGATTTATGGGAGAAATAAAACTAGAATTGTCAAAACCTTATTTTAAAAATCCATGCGACATTTTGACCCAATTTGTTAGGTCATTTTATCCAATAATCCATATAACTTCCCGACCTCTCTACCAACAATGAAATTAATTAGCGAACCATAAATCCAACTATAAAGAGACTATTTTAAAATAACTTCAAGACCCCTTCAACCATTACAAAATTTAAAATAAAAATTTAGAGACCAATTTTCTTCTTTTAACTTGGGACAAAATAAAATATATTTTAAGACCTTTTTTTGTCCCAAAAATAGTTTAAAATAAATATATGAATTATTAGTGTTTTTTTTTTTTTCAAATTCAAATGTCTTTCTAACCATTTTAAAATTACCAAATTCCCATAAATTCACTTTTTGGGTTATTTTCCAGGAATGGGCCC 3782 38.26 MAILRLLLTLSFLASTAFANIGNVDDYWKARAAEAEQAAADAFEPNPENVTNYFNAKVGQVLIGTNSTRRNLKKYTGPCLATNPIDRCWRCDPNWAQNRKKLADCVLGFGHKTIGGKLGPYYVVNDSSDSDLMNPKPGTLRHAVIQKGPLWIIFSTNMAIRLTQELIMTSDKTIDARGANVQIAYGAGITLQYIKNVIIHGLRIHHIVVGSGGMIRDAVDHVGLRTMSDGDGISIFGSSNVWIDHVSMSRCHDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDGYSNDQIMQVTVAFNHFGQGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPNVYAKEVTKREYSPEEVWKSWTWRSEGDLMMNGAFFVTSGDQSKRRPFSRMDMISYKPGTYVRRMTRFAGALACFVGRPC 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45519784 45523822 - XM_039036811.1 Bhi07g01600 39989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01600 432 Pfam Pectate lyase, N terminus 20 72 IPR007524 GO:0030570
Bhi07g01600 432 Pfam Pectate lyase 170 348 IPR002022 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 105 122 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 129 154 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 165 181 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 229 250 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 309 328 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 331 350 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 373 397 IPR018082 -
Bhi07g01600 432 PRINTS Pollen allergen Amb family signature 403 426 IPR018082 -
Bhi07g01600 432 PANTHER PECTATE LYASE 10 432 - -
Bhi07g01600 432 SUPERFAMILY Pectin lyase-like 83 423 IPR011050 -
Bhi07g01600 432 SMART amb_all 157 354 IPR002022 -
Bhi07g01600 432 PANTHER PECTATE LYASE 18-RELATED 10 432 IPR045032 GO:0030570
Bhi07g01600 432 Gene3D - 82 425 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01600 Bhi-Chr7:45519784 Bhi08g01414 Bhi-Chr8:41879427 0 dispersed
Bhi04g01228 Bhi-Chr4:30098174 Bhi07g01600 Bhi-Chr7:45519784 0 transposed
Bhi11g03023 Bhi-Chr11:82254620 Bhi07g01600 Bhi-Chr7:45519784 0 transposed
Bhi07g01600 Bhi-Chr7:45519784 Bhi08g01413 Bhi-Chr8:41879424 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01600 K01728 - csv:101206497 810.831