Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01651 TCTATATGAACCAAACCAGCCTAGCCTTCAGTTCTAGAGTCGGAAAATGAACGGGTCTCGCACGTGCTCGCTGTGTGGGAAGAATGGCCACAACTCCCGCACGTGCCCGGAAGGGGACGGCGGCGGATTCATGTTGTTCGGAGTTAGGGTGACAACGACGGAGGGAAGTAGCTCGTTTAGGAAAAGCGTTAGTATGAATAATCTCTCGCAATACGCAGACCAGCCTCCAAGTCAAGACTCCAACAACGCCGCCGATGCCGGATATGCTTCTGACGACGTCGTTCACCCATCTGACCGTTGCGGCGGCCGGAAGAGAGGGATTCCATGGACGGAGGAAGAGCATAGGCTGTTTTTGTTGGGATTACAGAAAGTTGGGAAGGGAGATTGGAGAGGGATTTCGAGGAATTTTGTGAAGACACGTACGCCAACTCAGGTTGCAAGTCATGCTCAGAAATATTTTCTCCGACGGAATAATTTCAATCGGCGACGCCGTAGATCCAGCCTTTTCGATATCACTACTCATACGTTCACGAACTCATCCACGGAAGACGATTTGATGTTTTCCGGCCACGAGGTTATGCCGCCACCGCTACCACCGTCGCAGCCGCAAAAAGACAACAATCCGGGAAATTTCCCCGTGAAAATTCATCCAGCAAAACCACCTCCCGCCGCTGTATCCGGAGGCGCCGACGATAGCAACGCCGTGGAGAGTACACTAACACTACGTTCATCAAATTCTGAGGCAAAGACGTGCGGTTCCAAAATTAGTCGTCCAATACCAATGCTTCCTTTATCTCCATACCCAAAATTTGCTGAATTGAACATTAACGAGAGAACGCCAGAAGACCCTTTGCCCCTAACTTTGAAGCTCTCAACTCAACATTCGGAGGGACAGTCACCGGCGGCGGCTTCACAGTCGTCCGGCAGTTTCCAGGCAATGTCAGGCGGCGGAGACAGCATAGACATTGTCAGTGTTGCTTGAAGATTGTTGGGGTATTAGATATAAAGAATAATTGCTTGGATTTAATTGGACAGTGGATAAAAAGGGATTCCAGCTTTGTTTTTGTACAGATGAAATTTAATTGGTCCAGAAAAAAAGAGAGAGAGGGAATATGGGGGGACTGTGGTTTGACTTATTTAGTTCCTCTTTGATAAAGTTGGTTGTATTTCTATTTTTTTTAGAATTGTTATGTTAATGTTCATATAATTCTTCCTATGCTCTTGCTTCAAAATGCTTGAGTAATATTTCCATTAAAAA 1258 46.82 MNGSRTCSLCGKNGHNSRTCPEGDGGGFMLFGVRVTTTEGSSSFRKSVSMNNLSQYADQPPSQDSNNAADAGYASDDVVHPSDRCGGRKRGIPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNFNRRRRRSSLFDITTHTFTNSSTEDDLMFSGHEVMPPPLPPSQPQKDNNPGNFPVKIHPAKPPPAAVSGGADDSNAVESTLTLRSSNSEAKTCGSKISRPIPMLPLSPYPKFAELNINERTPEDPLPLTLKLSTQHSEGQSPAAASQSSGSFQAMSGGGDSIDIVSVA 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 46416870 46419208 - XM_039035469.1 Bhi07g01651 40040

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01651 311 MobiDBLite consensus disorder prediction 54 91 - -
Bhi07g01651 311 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 20 311 - -
Bhi07g01651 311 ProSiteProfiles Myb-like domain profile. 93 138 IPR001005 -
Bhi07g01651 311 ProSiteProfiles SANT domain profile. 94 142 IPR017884 -
Bhi07g01651 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Bhi07g01651 311 Gene3D - 92 144 - -
Bhi07g01651 311 CDD SANT 93 137 IPR001005 -
Bhi07g01651 311 PANTHER KIN2 20 311 - -
Bhi07g01651 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Bhi07g01651 311 MobiDBLite consensus disorder prediction 266 311 - -
Bhi07g01651 311 MobiDBLite consensus disorder prediction 54 70 - -
Bhi07g01651 311 MobiDBLite consensus disorder prediction 271 299 - -
Bhi07g01651 311 ProSiteProfiles Zinc finger CCHC-type profile. 7 22 IPR001878 GO:0003676|GO:0008270
Bhi07g01651 311 SMART sant 90 140 IPR001005 -
Bhi07g01651 311 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Bhi07g01651 311 MobiDBLite consensus disorder prediction 173 243 - -
Bhi07g01651 311 MobiDBLite consensus disorder prediction 216 237 - -
Bhi07g01651 311 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01651 - - - csv:101207806 504.597
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01651 Bhi-Chr7:46416870 Bhi02g01906 Bhi-Chr2:51295270 1.61E-37 dispersed
Bhi01g02558 Bhi-Chr1:63127182 Bhi07g01651 Bhi-Chr7:46416870 1.05E-37 transposed
Bhi09g00460 Bhi-Chr9:9834535 Bhi07g01651 Bhi-Chr7:46416870 4.52E-45 transposed
Bhi11g00044 Bhi-Chr11:904635 Bhi07g01651 Bhi-Chr7:46416870 9.28E-44 transposed
Bhi02g00380 Bhi-Chr2:7200800 Bhi07g01651 Bhi-Chr7:46416870 2.17E-42 wgd
Bhi07g01651 Bhi-Chr7:46416870 Bhi08g01438 Bhi-Chr8:42421263 1.23E-45 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g806 . . . . . . . . Cmo04g01686 . . . . . Sed04g0666 . Cpe01g01422 Bhi07g01651 Tan04g1157 Cmetu10g0115 Lac13g0251 Hepe10g1689 . . Cla05g02500 Cam05g2684 Cec05g2717 Cco05g2752 Clacu05g2687 Cmu05g2541 Cre05g2656 . . . Cone12ag0614 . Csa05g02385 Chy10g00949 Cme10g00477 . . . . . . . . . . . Cma04g01608 . Car04g01650 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013797 0 1 0 0 0 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 2 1 1 25
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1598 PF00249 Myb_DNA-binding 1.80E-10 CL0123 Bhi TF