Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01752 GGGGAAAAAAGGAAAAAAAGAAAAGAAGGAAAGGTGGAGTCCAGAAGAAAAAAAAAAAGTGGCTCCGTCTCTTTCTCTCGTCTAAGCTCTCGCACAGTGCGGGAGCCAACCTAAGCATCTCATTCGTTGTTTGTTCTTCGGAAAAACACACTACTCGAGAACACCTGCGCTTCTTCTCTGCCACTCCCAATTCCGGCAAACTTCACCTTCTTTCTTTCTCTTCAATCTCTTCCTCTTATTCCTACACCGATTATATTTTCTTCTTCTTTATTTTAATCTCCAGTTCATCATCATCTACACATCCTCCGGCGATTTCTCTCTCTATCTTTGTTTTTTCTGCTTTCTATAAGCTATACTGTTACTATGGAAGAAATGTACGGTTTGCAATCCACGGCGGAGTATTCAGATAAGGCCTTGATGTCGCCGGAGAATCTGATTCTTCCACCGGATTATCACAGCCTTCTCGTGAGTTCTGGAGAGTTTCGTGATCGGATTCCGGTGTTTGGATCCAACGAACTGCTTTCCGCAGCAGCATCGGTGATTTCGGAAGCTGAAGCAGCATCGATCACGCCGGAAATTCAACGTGAAGAAGATATGGTGAACGTGATCAAAGCTAAAATTTCTTCTCATCCTACTTATCCTCGTTTGCTCGATGCCTATATTGACTGCCAAAAGGTAGGGGCGCCTCCGGAGATTGCACATTTGTTAGAAGGAATCCGTCAAGAAAGCGACCTTTGTAACCGTCACGCTGCCACCACGTGCTTGGGCGTCGACCCCGAGCTCGATGAATTTATGGAAACGTACTGCGATATGTTGGTGAAGTACAAATCAGATCTCAAAAGGCCTTTCGACGAAGCAACTACGTTCTTGAACAAAATCGAACTGCAACTTAGTAACCTCTGCAATGGCGCCTTCTCCAGAAGCCTTTCCGATGATGGTGCTGTCTCGTCGGATGAAGAGTTGAGCGGTGGCGAGATGGAAGTTGTGGAGGCGGAGGCTCAAACCAAAGGCGAGAACAGGGATCTCAAGGACAAGCTTCTACGTAGATTTGGGAGTCATATTAGTACCCTAAAATTGGAGTTCTCAAAGAAGAAGAAAAAGGGAAAATTACCAAAAGAAGCTAGGCAAACACTTCTTCAATGGTGGGACGTTCACTATAAATGGCCATATCCTACGGAAGCGGATAAGGTTGCATTGGCAGAGAGAACGGGGCTTGATCAAAAGCAAATTAACAATTGGTTCATAAATCAGCGAAAACGCCATTGGAAGCCATCAGAGAATATGCAATTTGAAGGAATGGATGGGCTTTCTTCTGGTAGATTCTTCAGAGAAGACTGAAACACTTTAACGATCTCAAGATGTATATTCCCAATATTGTTTCTTCTAATGTGAGCTTTTGTTTGCTTTCCCTTCATGTATATCTGGAAAAATATATATATTTATATGCTGAAGAATTTGAACACTGAAAATTATTGCTTGTGTTACCAATATAGAGAATAAATTCCAAGTTTCTTATGTCA 1520 42.83 MEEMYGLQSTAEYSDKALMSPENLILPPDYHSLLVSSGEFRDRIPVFGSNELLSAAASVISEAEAASITPEIQREEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPEIAHLLEGIRQESDLCNRHAATTCLGVDPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSNLCNGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRDLKDKLLRRFGSHISTLKLEFSKKKKKGKLPKEARQTLLQWWDVHYKWPYPTEADKVALAERTGLDQKQINNWFINQRKRHWKPSENMQFEGMDGLSSGRFFRED 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 48154438 48161425 + XM_039036254.1 Bhi07g01752 40141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01752 324 ProSiteProfiles 'Homeobox' domain profile. 240 303 IPR001356 GO:0003677
Bhi07g01752 324 SMART KNOX2_2 130 181 IPR005541 GO:0003677|GO:0005634
Bhi07g01752 324 SMART HOX_1 242 307 IPR001356 GO:0003677
Bhi07g01752 324 SMART KNOX1_2 80 124 IPR005540 GO:0003677|GO:0005634
Bhi07g01752 324 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677|GO:0005634
Bhi07g01752 324 SMART ELK_2 220 241 IPR005539 GO:0003677
Bhi07g01752 324 CDD homeodomain 252 304 IPR001356 GO:0003677
Bhi07g01752 324 Pfam Homeobox KN domain 260 299 IPR008422 GO:0003677|GO:0006355
Bhi07g01752 324 Pfam ELK domain 220 241 IPR005539 GO:0003677
Bhi07g01752 324 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 1 313 - -
Bhi07g01752 324 ProSiteProfiles ELK domain profile. 220 240 IPR005539 GO:0003677
Bhi07g01752 324 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677|GO:0005634
Bhi07g01752 324 SUPERFAMILY Homeodomain-like 241 316 IPR009057 -
Bhi07g01752 324 ProSitePatterns 'Homeobox' domain signature. 278 301 IPR017970 GO:0000981|GO:0006355
Bhi07g01752 324 Gene3D - 239 313 - -
Bhi07g01752 324 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00474 Bhi-Chr4:12094223 Bhi07g01752 Bhi-Chr7:48154438 2.09E-66 dispersed
Bhi07g01752 Bhi-Chr7:48154438 Bhi09g03182 Bhi-Chr9:81520335 2.36E-84 dispersed
Bhi02g00452 Bhi-Chr2:8715029 Bhi07g01752 Bhi-Chr7:48154438 1.48E-88 transposed
Bhi06g01506 Bhi-Chr6:45026591 Bhi07g01752 Bhi-Chr7:48154438 2.29E-83 transposed
Bhi08g01941 Bhi-Chr8:55807551 Bhi07g01752 Bhi-Chr7:48154438 3.79E-08 transposed
Bhi04g00662 Bhi-Chr4:15681009 Bhi07g01752 Bhi-Chr7:48154438 1.25E-134 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1610 PF03791 KNOX2 1.20E-24 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01752 - - csv:101211876 609.757