Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01897 CCAATTTTTTTTTCTTGTCGAGTTTTGAATTTTTTTACATATCAGAGGGAGTAGGCACTGTATTCAAGCGTGTTTTCGTATGGTGTTGTCTTTACTTGCTACCCTAGATTTTGGTGATGCGAACGCTGGAAAGTTCGAATGGTCAATTTCAAATAATCCGAATTCCTGGTGATGGAAGATGTTTGTTTCGATCAGTGGTTCATGGTGCTTGTCTCAGATCGGGGAAGCGGGCTCCAAGCGAGGTGCTTCAGAAAGAGCTTGCAGACGAGCTCAGAGAAAACGTTACAAATGAGTTGATGAAGAGGCGTTTGGACACTCAACAGTTTATTGAAGGTGACTTCAGTCAGTATGCTAGACGCATGCGCCAACCACATGCATGGGGAGGAGAACCTGAGTTACTAATGTCTTCACATGTCCTACAGATGCCAATCTCAGTCTACATGAGGGACAAGAACTCGGGAAATCTTAAGCTCATAGCTGAGTATGGGCAGGAGTACGGCAAAGAAAATCCTATCCGCGTCCTTTTTCACAGCTACGGACATTACGATTCATTGAAGGCTCCATGCTATTAAAGAAGTTGGTTGAAAACGAAGCGACGATAGATCTGTTGACCTCATTGACGGAGAAGAAAGAGGGAGTGGAAGAAAATTAGAGAGGGAAAATGTTTGATGATGCTAGGAAAGTTTTATAGAATATTTTATTTTGAGAATTCAAGTTCAATTTCATGAGTTCCAAACTCGAGTCACAACTTTGGAGTAAGATATTTGAATCTATGATTTTTTTATGTAATAATATTAATTTTGACCTTAAACTCGACGAGCAATATCAAGTTTAACTTTTATTTTTA 847 39.79 MRTLESSNGQFQIIRIPGDGRCLFRSVVHGACLRSGKRAPSEVLQKELADELRENVTNELMKRRLDTQQFIEGDFSQYARRMRQPHAWGGEPELLMSSHVLQMPISVYMRDKNSGNLKLIAEYGQEYGKENPIRVLFHSYGHYDSLKAPCY 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50925546 50929962 - XM_039035897.1 Bhi07g01897 40286

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01897 151 ProSiteProfiles OTU domain profile. 11 149 IPR003323 -
Bhi07g01897 151 PANTHER OTU DOMAIN CONTAINING PROTEIN 10 149 - -
Bhi07g01897 151 Gene3D - 1 151 - -
Bhi07g01897 151 SUPERFAMILY Cysteine proteinases 10 147 IPR038765 -
Bhi07g01897 151 PANTHER OS09G0487700 PROTEIN 10 149 - -
Bhi07g01897 151 Pfam OTU-like cysteine protease 17 143 IPR003323 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01897 K18342 OTUD6; OTU domain-containing protein 6 [EC:3.4.19.12] - csv:101209836 269.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01897 Bhi-Chr7:50925546 Bhi11g02665 Bhi-Chr11:71807328 1.19E-68 dispersed
Bhi07g01897 Bhi-Chr7:50925546 Bhi07g01898 Bhi-Chr7:50925546 2.09E-113 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1176 . . . . . . . . . Cmo18g00699 . Cma18g00711 . Car18g00656 . Cpe09g00578 . Bhi07g01897 . . . Hepe10g1531 . . . . . . . . . . . Cone8ag0739 . Lsi04g00664 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla11g01356 . Cec11g1440 . Clacu11g1571 Cmu11g1391 Cre11g1812 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000657 2 7 1 4 3 2 4 2 3 3 3 3 3 3 3 4 3 4 4 3 3 3 2 2 2 3 2 8 5 3 97