Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01899 CTAAGTGTTCTTACAATTACAACCTTACCTCGCCATTTGACTATGTCAAGTCAACCCGTCTCTTCGTCAAATCCCCAACGCTTCTCAGAGAAGTTTAATAACGTTCTCCCAAAACCCAAAACCCAAAACGCCGTCGTTTCATTACTTCAAACCAAACCAAACCAAAGCCAAGCTGCAGCTTCCACCGCAAGCAAATCCCATCTCCTTCACCATATAAAACCCAAGCCCTGATTCCCCACCAAAATCCAAAAACAAAAATGCCGTTTCTAGCGAACATGCCATCGACAACCTCTGTTTTTTCAGCTTACACTTCCTTCGCCGCTTCAACAATGATCGCTCGAACAATGATCTCCGAAACCCACTCAATCATCTCCCAATTCATTCCTCAAAAACTCCGCGACCAAATCTCCTCCAAATTCAGCGCCATTTTTGGTTCAATCTCCTCTCAGATCGTTCTCATTGTCGAAGAAAACAACGGAATCGCCATTAACGAGCTTTTCAGAGCATCCGAAACTTACCTCTCTACAAAAATCTCTCAATCTCTCAAGCATCTCAAGGCTTCCAAGGCTCCAGGCGAGACCAATTTAACGTTCAAAATGAACAAAGGCGACGTACTTATCGACGTATTCGAAACAATTGAAATCGCTTGGGAATTGATTTCCACTGAAAAACAGAGTACTTATTTCGACTTCGATATCGCTACTCAAACATCCGAAACAATTGAAAAACGGCATTACCAAATCAGCTTCGACAAGAAGCACAAAGATCTGGTGATGAAGATTTACCTTGAGTACATTCTAGACAGAGCAAAAGCCATAGAGGAAGAAAACAGAGTGGTGAAGCTTTATGCATTAATGGGAGGATATGCGATTGGGGATTCGATTGTTTTGCAGAACAGTTGTAGTTTTGAGAATTTGGCTATGGATTTGAAGAAGAAGAAGGAATTGATGGATGATTTGGATAGATTTATGAGGAGAAGGGATTTTTATAAGAGAATTGGGAAAGCTTGGAAAAGAGGGTATCTTCTTTATGGGCCACCGGGAACGGGGAAATCGAGCTTGGTTGCGGCCATGGCGGATTATCTCAAGTTTAATATTTATGATTTGGAGCTTACCAGTGTTCAGACTAACTCGGCGCTTAGGACGATGCTGTTGTCTACTGCCGATAGGTCCATTTTTGTTATTGAGGATATTGATTGCAGCGCTGAGCTTCACGATCGTACAAATGGCGGACGTGACGGCGGTGACAGCCAGTTGACTTTGTCTGGAGTATTAAACGTCATAGATGGGTTATGGTCAAGTTGTGGCGATGCAAGAATAATAGTTTTCACAACAAACCATAAGGAAAAATTAGATCCCGCATTGTTAAGACCAGGACGCATGGATATGCACGTGCACATGACTTATTTGACTCCTTCTGGATTTGAAATTCTAGCCTCTAACTATTTGCAAATCAATCACCATCAACGTTTCAAAGAAATCCAAGACCTTATAATGGAGGTGGAGGTCACGCCTGCAGAAATTGCAGAGGAGCTCATGAAAAGCGACGATGCTGATGTGGCACTTGAATCTGTCGTTGAATTCGTCAATGGGAAGAAGAAGAAGAAAATGGAAAAAGAGTGTAATTCTGACCCGATTGAAAATGTTGATGGTCAGATCTCCCGAGATATTGAGAAAGAAGGTCTAAAGTTGAAAAAGAGAAATAAAAGAAGGCGAAATAGATGGAGTCGATCCTAAGTCATGAATCAATGTTCGTATTATTATTAGTTAATTAGGATAATATAAGTTTTATAGTTATTGAATTACGTTCATGTTGGGTATAAATATTTTCATATGAAATTATTCAAAATGTGTGTCTGCAGTAGTACACTATAGCACTAGCACAAGGTATTAATAAGATATAATGATTTGAAAGTT 1916 40.4 MPFLANMPSTTSVFSAYTSFAASTMIARTMISETHSIISQFIPQKLRDQISSKFSAIFGSISSQIVLIVEENNGIAINELFRASETYLSTKISQSLKHLKASKAPGETNLTFKMNKGDVLIDVFETIEIAWELISTEKQSTYFDFDIATQTSETIEKRHYQISFDKKHKDLVMKIYLEYILDRAKAIEEENRVVKLYALMGGYAIGDSIVLQNSCSFENLAMDLKKKKELMDDLDRFMRRRDFYKRIGKAWKRGYLLYGPPGTGKSSLVAAMADYLKFNIYDLELTSVQTNSALRTMLLSTADRSIFVIEDIDCSAELHDRTNGGRDGGDSQLTLSGVLNVIDGLWSSCGDARIIVFTTNHKEKLDPALLRPGRMDMHVHMTYLTPSGFEILASNYLQINHHQRFKEIQDLIMEVEVTPAEIAEELMKSDDADVALESVVEFVNGKKKKKMEKECNSDPIENVDGQISRDIEKEGLKLKKRNKRRRNRWSRS 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50946377 50950160 + XM_039037032.1 Bhi07g01899 40288

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01899 492 Gene3D - 380 449 - -
Bhi07g01899 492 Pfam Domain associated at C-terminal with AAA 42 134 IPR025753 -
Bhi07g01899 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 431 IPR027417 -
Bhi07g01899 492 Gene3D - 208 379 IPR027417 -
Bhi07g01899 492 ProSitePatterns AAA-protein family signature. 353 371 IPR003960 GO:0005524|GO:0016887
Bhi07g01899 492 Pfam ATPase family associated with various cellular activities (AAA) 256 381 IPR003959 GO:0005524|GO:0016887
Bhi07g01899 492 PANTHER - 3 470 - -
Bhi07g01899 492 PANTHER BCS1 AAA-TYPE ATPASE 3 470 - -
Bhi07g01899 492 SMART AAA_5 251 385 IPR003593 -
Bhi07g01899 492 CDD AAA 252 383 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01899 - - K08900 qsu:112018277 530.791
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00924 Bhi-Chr3:17468282 Bhi07g01899 Bhi-Chr7:50946377 3.46E-140 dispersed
Bhi07g01899 Bhi-Chr7:50946377 Bhi08g01433 Bhi-Chr8:42260227 4.63E-107 dispersed
Bhi07g01899 Bhi-Chr7:50946377 Bhi09g02179 Bhi-Chr9:61255837 1.08E-144 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1183 . . . . . . . . . . . . . . . . . Bhi07g01899 Tan04g0078 Cmetu10g0910 Lac13g0068 Hepe10g1530 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000531 0 2 1 2 1 4 1 7 5 4 3 5 2 3 7 3 5 0 1 5 5 2 3 6 7 7 5 5 5 5 111