Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01900 CAATTTCGATGACCATAATAGTCACTTGCCACTCACGCCCAGCTCTCGCCTCTCAAATCTGACAAAGAAAGAAAATATTGAGTTGATATTGCGCTTTCGAATAAATCTCTCTTTCGAGAATTTCACTCTCCGATTTGATGCATCAACTGCAATGAGATGAATGTCTACAGATGATTCAGCAGCGTTTAAGCTTCTCTTCGATTCTTCTCACTTTCTCTATTGCTTTTTTATGAAGCCTCCTTGGTCGATTCCTCCTGCCCTTCTTCTCTTCTGAGTCTTATCTTTTTGGCAACTCGGATGACATAGATTTTCGTTGATGAACATAAAATTATGGATGTTCCCGAGGTTGAAGAAATATTTTTTGCTGCCGGTGATGCCAAGTTGCACGGAGAAATGTACAAGAAACTCGCTGCAATTTATGGCCAAGTTATGTCAATTTTCCCTTCCTTGGAAGCAGCACGACCTAGAAGCAAAACTGGTATCCAGGCTTTATGTTCATTACATGTAGCTCTTGAGAAGGCTAAGAATACTCTTCGGCATTGCTCAGAATCCAGTAAACTTTACTTGGCTATAACTGGAGATGCTGTTCTAGCCAAATTTGAAAAGGCAAGATGTTCTCTTGAAGTTAGTCTTATATGCGTTGAAGATATTGTCTCACAATCAATTGGATTTCAGATTCAGCAGATAGTGAACGAACTCAAGGACACTGTTTTCTTACTTGATCCGCTCGAGAAACAAGTTGGTGATGATATCATTGCATTACTCCTGCAAGAAAGAAAATTTGATGATTCCAATGGCCACAATGAGCTGGAGCATTTTCACCAGGCTGCCACAAAACTTGGAATTACCTCCTCCAAAGCAGCCCTGACAGAGAGGAGAGCTCTTAAGAGAATTGTAGAACGAGCACGCTTAGAAGAAGACAAGCGAAAGGAATCAATTGTAGCTTACCTTTTGCATCTGATGAGGAAGTATTCTAAGTTATTTAGAAGTGAGTTGGCAGATGACACCGACTCACAGAGTGGGTCAACTCCTTGTTCTCCTACTGTTCGATGTTCTCTTGAGGACAATGGACTTGCAGCAAATGGTCAAGTCTTTGAACACCAGCTTTCGAAGCTTAGTTCTTTTAATTTCAAGCCAAACTACAGGATATCAGGGCAGATGCCTCTTCCACCTGAGGAATTAAGGTGTCCAATATCATTGCAGCTTATGTATGACCCTGTCATAATTGATTCTGGGCAAACATATGAAAGGATCTGTATAGAGAAGTGGTTCAGTGATGGTCATAAAACCTGCCCGAAGACTCAACAGAGGCTTTCCCACCTGTCTCTGACACCTAATTACTCTGTCAAGGGTCTCATTGCTAATTGGTGTGAACATAACGGAGTTCCTATCCTGGATGGTCCACCAAAGTCACTTGATCTGAATTATTGGAGGCTTGCATTGTCTGATTCTGAGTCTGGTAAATCAAGATCTGTGGACAATGTTGGCTCTCACACGTTGAAGGAAGTTAAGGTAGTTCCTTTGGAGGAAAGTGGAACAATTAAGGTTGCTGAAGAAAATGACGCAGATGATAATACATACATGGAGGAGTCATCTGATTTTATTACGCTGGAGAGTTGTGTAAATTTTATGGCAGTATTGACTGAAGAGGGAGACTTGAGAAAAAAATGTAAGGTTGTGGAGCAGATAAGACTTTCATTGAAGGATGATGATGAAGCTCGAATTTTGATGGGAGCCAATGGCTTTGCTGAAGCACTTATGGACTTCCTAACTTTAGCTCTTATTGAAGAAAATGCTGATGCTCAGGAAACTGGAGCCATGGCTCTCTTCAATCTTTCTGTCAACAACAACAGAAACAGGGAAATGATGATAGCGGCAGGTGTAATCTCGTTGTTGGAGAACATGATTTTGAAATCCAATTTACATGGACCTGCAACAGCCCTTTATTTGAATCTTTCCTGCCTCGAAGATGCCAAACCTATCATTAGTTCGAGTACAGCCGTTCCTTTCCTGATCCAGCTGCTTACTTGTAATGGTGAATCCCAAACCAAGCTCGATGCACTTCATACCCTTTATAACCTTTCAACCACGCCCTCCATCATTCCCGTTCTTCTTTCCGCTGGTATTGTCAATGGACTCCAATCCTTTCTCGCAGCTCCTAGCGACAGCATGTGGACAGAGACTTCCTTAGCTATCTTAATGAACATAGCTTCAAGCCAGTTGGGAATAGAAGAAATAACTTCAGCCCCAGAGCTCATCAGTGGGTTGGCAGCAATCGTGGATGCTGGCGAACGTGCCGAGCAGGAGCAAGCTGTATCATGTTTGTTGATTTTGTGTAGAGGGAGTGAAAAATGCAGTCAAATGGTCTTACAGGAAGGAGTGATTCCAGGATTGGTTGCGATTACGGTAAATGGAACTTCAAGAGGGAAAGTAAAAGCTCAAAAACTTCTGATGTTGTTTAGGGAGCAGAGGCAAAAAGATACTGATATCATTCAACAACGAGATGGAGACAGCGACAAAGCCATGGCTGCTCCAGATTCGAAGCCATTATGCAAATCAGTGTCGAAGAAAAAGATGGGGAAAGCGCTAAGCTTTTTTTCGAAGAGCAAACGATTTTCACTGTACCAATGTTGAGCTCATCATCCTTGTAAATTCTGCTGTATCATATGTATGTATATTTCTTTTTTGTCCCACTCTTAGTTTGGTTTTCTCGGTTAGCTTTTCTTTTCTAATAGGACTAGCAATGTACAGGTTTCTGTAATTAATGATTTCTTATCATTTTCTCTATTGTTTGAGTAGAACATGTTTATGTAGAACAGATTCCATTTCTTAGTTTACTTACCACTTCTGTTGCTATTCTATAGCAGATTTTAA 2874 41.13 MDVPEVEEIFFAAGDAKLHGEMYKKLAAIYGQVMSIFPSLEAARPRSKTGIQALCSLHVALEKAKNTLRHCSESSKLYLAITGDAVLAKFEKARCSLEVSLICVEDIVSQSIGFQIQQIVNELKDTVFLLDPLEKQVGDDIIALLLQERKFDDSNGHNELEHFHQAATKLGITSSKAALTERRALKRIVERARLEEDKRKESIVAYLLHLMRKYSKLFRSELADDTDSQSGSTPCSPTVRCSLEDNGLAANGQVFEHQLSKLSSFNFKPNYRISGQMPLPPEELRCPISLQLMYDPVIIDSGQTYERICIEKWFSDGHKTCPKTQQRLSHLSLTPNYSVKGLIANWCEHNGVPILDGPPKSLDLNYWRLALSDSESGKSRSVDNVGSHTLKEVKVVPLEESGTIKVAEENDADDNTYMEESSDFITLESCVNFMAVLTEEGDLRKKCKVVEQIRLSLKDDDEARILMGANGFAEALMDFLTLALIEENADAQETGAMALFNLSVNNNRNREMMIAAGVISLLENMILKSNLHGPATALYLNLSCLEDAKPIISSSTAVPFLIQLLTCNGESQTKLDALHTLYNLSTTPSIIPVLLSAGIVNGLQSFLAAPSDSMWTETSLAILMNIASSQLGIEEITSAPELISGLAAIVDAGERAEQEQAVSCLLILCRGSEKCSQMVLQEGVIPGLVAITVNGTSRGKVKAQKLLMLFREQRQKDTDIIQQRDGDSDKAMAAPDSKPLCKSVSKKKMGKALSFFSKSKRFSLYQC 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 50951887 50957297 - XM_039036628.1 Bhi07g01900 40289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01900 767 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 7 1 731 - -
Bhi07g01900 767 Gene3D - 403 723 IPR011989 -
Bhi07g01900 767 SUPERFAMILY ARM repeat 448 712 IPR016024 -
Bhi07g01900 767 CDD RING-Ubox_PUB 284 326 IPR045210 -
Bhi07g01900 767 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Bhi07g01900 767 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Bhi07g01900 767 SUPERFAMILY RING/U-box 274 355 - -
Bhi07g01900 767 SMART arm_5 545 586 IPR000225 GO:0005515
Bhi07g01900 767 SMART arm_5 506 544 IPR000225 GO:0005515
Bhi07g01900 767 SMART arm_5 460 504 IPR000225 GO:0005515
Bhi07g01900 767 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Bhi07g01900 767 PANTHER U BOX DOMAIN-CONTAINING 1 731 - -
Bhi07g01900 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 353 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00548 Bhi-Chr4:13270144 Bhi07g01900 Bhi-Chr7:50951887 0 dispersed
Bhi04g00549 Bhi-Chr4:13270145 Bhi07g01900 Bhi-Chr7:50951887 0 dispersed
Bhi04g00541 Bhi-Chr4:13269862 Bhi07g01900 Bhi-Chr7:50951887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01900 - - csv:101210079 1430.62