Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi07g01933 GCAGCCCACTCGCGCTCATTCACGCTACGAAACGGCGTTCGTGCCCCCTTTTACCCGACGAGCATCGCCGTTCCCAACTGAAGAAAAGATCCACGCAGCTATTCCGAGTCCAAGAACAAGATCTCTCCGTCATCGTCTTTCTCATAAGTCGCAACATGTCTCAGGTTGATAGCAGGAATTCCTCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGATGATTGGACTTGTCCTAGTTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAATTGCACTCAGCCACGTCCTGCTGATCATAATTCTAAATCTGCTGCCAAGCCCATTCAAGCACCGCAGGGTTACTCCTATTCTGCTCCTTACATGGGTTCAGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCATATGGTTCTTCCATATTCAACGGTTCATCTATACCTCCCTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACAGCAGCCGGTTTTCTGCAGGCAGCCCCTACAGGCCCTTGCACTTATCTGGGCCTGCACCTTATTCAAGTGGATCTATGATGGGAAACAGTGCAGTGTATGGTATGCCACCCATAATGGATCGCTATGGCATGGCTTTGCCAATGGGCCCTGGCGCCATGGGTCCGAGGCCAGGTTTTTTTCCAGATGATATATCTCAGAAGAAGGGTGCAGACACTACTCGCGACAATGATTGGGCATGCCCAAAATGTGGAAATATCAACTTCTCCTTTAGAACTGTTTGTAACATGAGGAAATGCAATACACCAAAGCCCGGGTCACAGGGTATCAAAAATGACAAAAGTTCTAAACAAAAGACGCCAGAGGGTAGCTGGAAGTGTGAGAAATGTAACAACATAAATTATCCATTCCGAACCAAGTGCAATAGACAAAATTGTGGAGCAGACAAGCCAGCGGATTCAGAGAAATCCCCATCACCAGCACAGGAAGAAAATGATCAGTGAGTTCTAGAACATGTTTGAGGGTTGAGAAGGTCCAGATTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCAGTCTTGTCGTCCTCTCATGTTGCAGCAGTTGTCAAGTCAGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTGATGGTCTTTTCACTCATTTAATTCACTATATCATATGATCTGGCAAAAGATTTAATGGTTGGTTTCTGTTATTAGGGACATTTACATTTGGAATCCACTTTTTTAGTCTAGTGGGCCTGTTAATTTGTGCACTAAAATATGTTGCGAGTAGACTAGACTCTACCCTTTTGGGTTTTCGGTTTTGAAATCTTCATTGTCTTTGTGC 1382 44.86 MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPIQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYSSRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGAMGPRPGFFPDDISQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGIKNDKSSKQKTPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 51761380 51765641 + XM_039037149.1 Bhi07g01933 40322

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi07g01933 285 MobiDBLite consensus disorder prediction 220 243 - -
Bhi07g01933 285 MobiDBLite consensus disorder prediction 1 30 - -
Bhi07g01933 285 SUPERFAMILY Ran binding protein zinc finger-like 233 271 IPR036443 -
Bhi07g01933 285 PANTHER OS08G0521400 PROTEIN 5 276 - -
Bhi07g01933 285 Pfam Zn-finger in Ran binding protein and others 239 269 IPR001876 -
Bhi07g01933 285 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Bhi07g01933 285 Pfam Zn-finger in Ran binding protein and others 194 223 IPR001876 -
Bhi07g01933 285 Gene3D - 14 54 - -
Bhi07g01933 285 Gene3D - 231 271 - -
Bhi07g01933 285 Gene3D - 187 225 - -
Bhi07g01933 285 MobiDBLite consensus disorder prediction 11 25 - -
Bhi07g01933 285 SUPERFAMILY Ran binding protein zinc finger-like 188 225 IPR036443 -
Bhi07g01933 285 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Bhi07g01933 285 SMART zf_4 195 221 IPR001876 -
Bhi07g01933 285 SMART zf_4 241 267 IPR001876 -
Bhi07g01933 285 SMART zf_4 24 50 IPR001876 -
Bhi07g01933 285 MobiDBLite consensus disorder prediction 264 285 - -
Bhi07g01933 285 PANTHER ZINC FINGER PROTEIN 5 276 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi07g01933 - - - csv:101214779 584.334
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02953 Bhi-Chr11:79545021 Bhi07g01933 Bhi-Chr7:51761380 1.76E-06 dispersed
Bhi11g02954 Bhi-Chr11:79545021 Bhi07g01933 Bhi-Chr7:51761380 1.76E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1257 . . . . . Bpe10g00764 . Bma15g00258 Cmo04g01938 . . Cma18g00689 . Car18g00639 Sed01g1192 Cpe09g00596 Cpe01g01622 Bhi07g01933 Tan04g0039 Cmetu04g2908 Lac13g0044 Hepe10g1508 . . . . . . . . . . . . . Lsi04g00689 . . Cme10g00672 . . . . . . . . . . . Cma04g01842 . Car04g01847 . . . . . . . . . . Cla11g01331 Cam11g1390 Cec11g1412 Cco11g1408 Clacu11g1548 Cmu11g1369 Cre11g1787 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005402 3 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 40