Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00052 TCCTTTTTCTTTTATACATCAAATGGTCACAGAAAAAAGAAAAGAAGAAAAGAAAAAAAAGACAGACCAAAAACACCTTTTGTTCATCATTTGAATATCAAACCTTTATAAAGCTGAAGTTTTCTTTTGCTCTCTTTTTTGTTCAACTTATCAAGATGAATGCTTTATGTTAACCCCTTGAAGATATGGGTTTGAGAAATCACATGGCAGAAGATAATATCTTTTGTCTTCAATCCCCAACTTTCATAGAATGGCTTAAACCACACAATTCTTCTTTTTCTCCCTCCATCTCACACTCGTCTTCGTCTTCGTCCTCCTCCGACCGTGATTTGATCTCTCAGACGACGAGCATCCAATGCGTTAATACAGGGTTAATTCCTGATCAACATGAATTTTTTTCGTCATCTCGATGCCTGCCTTTGTTCACCGAGATCGACGTCTCGACGAAGAAGGATGAAGAAGGGGCACGAGCTCGAGATCATGAAAGGAAATATTTGGGAATTAAAGAGGAGGATGAAGATATGGAGAAAGTTGAAGTGGGTTTGCACATTGGGCTTCCAAATGTTGGTGATGTCTCTAATTTTGGTGATCATGGGAAGGAATTGAATGTTTGTGTAAAGAAAGAAGAAATTAACAGCTTGCAGAAAAGCTTCTCTAATTTTAACGCTCAAGGAAGGTTTTGGATCCCAACACAAGCTCAGATCCTTGTTGGTCCTATGCAATTTGCTTGCTCCATCTGCAACAAGTCATTTAATAGATACAATAACATGCAGATGCACATGTGGGGGCATGGATCTGAGTACAGAAAAGGGCCAGAATCTCTTAGAGGAACACAGCCAGCAGCAATGCTAAGGCTTCCATGTTATTGCTGTGCTCAAGGCTGCAAGAACAACATTAACCATCCAAGAGCCAAGCCATTGAAGGACTTCAGAACCCTTCAAACTCATTACAAAAGAAAGCATGGTTCTAAGCCATTTATGTGTAGAAAATGTGGCAAAACTTTGGCTGTTAAAGGAGATTGGAGAACCCATGAAAAAAATTGTGGTAAGCTTTGGTATTGCACTTGTGGCTCAGATTTCAAACACAAAAGATCTCTCAAAGACCACATCAGATCCTTTGGTAAAGGCCACTCCCCTTGCTCCCCTCTTGATCATGATGAATGCCTCACTGGATCTGATCAAGAAGATCACTTCTCTTGAATTATGTTACTAGGGTTTCTGTCGTATCGATCTCATGCAACATCTTAATTATCTCGTGCTCGGTAACAAAACATTCTCCGACCGATGGGTCGTGCGAGGAGAAATTATTTGGGAGATCTGAACAATGTGGTTGACAACGGTACAACTACATTGTGACAATCACATTGAATAGTTTTTCTGAGAAGCTCAAGAGGGAACGATTTGCTACGGAGCACTGTGATATATTATCTTTTTCTTTCTCCCTTTCTTTGAAGATTTAGGGTTTTCTAATAAGATGGGATTGCCAGAGGTGATGAAGTAGATGAATTTTCTTCTTTTGTGAGATTGGTGTTAGATTTTATTGTCTCTCTTTCATGGAGGAAATTTGTCAGCTTCATTGCTTATCGTAAACTGGTAATCTTTCATATATGAAGATCGAAAGACTCTCTCTCTGTCTTTCTAATT 1643 39.2 MGLRNHMAEDNIFCLQSPTFIEWLKPHNSSFSPSISHSSSSSSSSDRDLISQTTSIQCVNTGLIPDQHEFFSSSRCLPLFTEIDVSTKKDEEGARARDHERKYLGIKEEDEDMEKVEVGLHIGLPNVGDVSNFGDHGKELNVCVKKEEINSLQKSFSNFNAQGRFWIPTQAQILVGPMQFACSICNKSFNRYNNMQMHMWGHGSEYRKGPESLRGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGSKPFMCRKCGKTLAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPCSPLDHDECLTGSDQEDHFS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2362901 2366015 - XM_039037841.1 Bhi08g00052 40385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00052 337 SUPERFAMILY beta-beta-alpha zinc fingers 171 203 IPR036236 -
Bhi08g00052 337 SMART c2h2final6 227 259 IPR013087 -
Bhi08g00052 337 SMART c2h2final6 264 284 IPR013087 -
Bhi08g00052 337 SMART c2h2final6 180 202 IPR013087 -
Bhi08g00052 337 ProSiteProfiles Zinc finger C2H2 type domain profile. 180 207 IPR013087 -
Bhi08g00052 337 Gene3D Classic Zinc Finger 179 202 - -
Bhi08g00052 337 Gene3D Classic Zinc Finger 221 313 - -
Bhi08g00052 337 PANTHER ZINC FINGER PROTEIN WIP2 1 334 IPR043584 GO:0003700|GO:0010468
Bhi08g00052 337 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 1 334 - -
Bhi08g00052 337 SUPERFAMILY beta-beta-alpha zinc fingers 249 284 IPR036236 -
Bhi08g00052 337 ProSitePatterns Zinc finger C2H2 type domain signature. 182 202 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00052 Bhi-Chr8:2362901 Bhi11g02674 Bhi-Chr11:71997724 3.29E-99 dispersed
Bhi08g00052 Bhi-Chr8:2362901 Bhi10g00326 Bhi-Chr10:7041205 3.82E-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1617 PF13912 zf-C2H2_6 6.80E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00052 - - bhj:120082596 689.108