Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00070 AAATTGAATCATCGGAGAAGCGATGAGCGTTGTAAACGGAGGCACTCCAACGCAGTCTGCAAATCCGAACATGGGAAGAGAAATGCCGAAGGTGGTGGTGATTATGGGGCCGACTGGTTCTGGGAAGTCTCGTCTCGCTATTGACTTGGCTTCACTCTTCCCCGTCGAGATCATCAACGCCGACTCTATGCAGGTTTATCGAGGATTGGACGTTCTCACAAACAAAGTTCCTCCCGAAGATCAAAATGGAGTCCCGCATCATCTTTTAGGTACAGTGAGTCCAGACGTTGAATTCACGGCTAAAGACTTCCGAGATTCTGCCGTTCCTGTTATCGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACGAATTATTATATACAGGCCCTTGTTAGCCCGTTTCTTCTGGATGATTCTACAGAAAATATTAGCGGAAGTTGCTCCATTTATCACGGAGATGAAGAGCTGGGTATTGAGTTGGATGAGGGAAGAGATGATTTGAAGTATGACCATAACCATCTTAAAAAGATTGATCCAGTTTCAGCTAACAGAATCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGCGTTCTTCCCAGTATACTTTTTCAAGGAAAGGCTGCTGAGAATTGGGGTCAAGCTGATAATTTCAGATACAATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTAATTCTAGAGTTGACAGCATGATGACTGCTGGATTACTTGATGAGGTCTATGACATTTACAATCCAAATGCAAACTATACTAGAGGATTACGTCAAGCTATTGGTGTTCGGGAGTTTGAGGAGTTTCTGAGATATCATGTACCCAAAGGTAGATGCGAAGATGATAGTGCTGGGTTTAGTCCAAAAAATTTGATGGAGTGCAATGAGATTTTGAAAGAGAATATGAGGTCAATCCCAAATTCACCAAGTGATGGCCAACCCAGTTTGCTACTGAAAGAAGCTATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAGGAGGCTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGAATATATAACATCCAAAGTGGAGGATTCGTGGACTGCACAAGTCGTTGAACCTGCAGTCCACATAATTAGGTCTTTCCTTAAAGATGGTTGTTCAGCGACTGAGACAATGAACCCGCATAACTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAGTATATATGCCAGTTGATTTGTACAGGCTTGTGGGAATAAAGTATTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACGCATCGGAAACGAATGTATCGGCTTAAGAAGAAGTGTGAAGCGCTTTCCTTGCTGCAACAGAAACTATCTCCTCAAGAGTAGCTCTTATGGCTTGCAGTTTTGGTAATGCAAAGTAGTATTGGCATTGTTTTTTGACTTTTTATTAACCCTTTAGATTTTAGGAAAAAAAAAAATGTTAACCCTTTAGATTCAATCAAATGTAATTTAGGCTCTTAAGAGTCGAACTGCATAAGCCTAGTTTATAATGAGCCGTCTCTTGGTTTCTGATTTTTTTGCTCCTTTTTTCGGGCCCTTCTAGGATACTGTTACCCTTTTAGTGGACATATCGCCCACAGGTTTTGGAATCTTAAACCTAAAAAAAAAATGTTAAATTTGAGGGATTAAACTAAGGGTTTAGATAGTCTAGATTTAACAAAACTATATTTGGAGTGCAACAAAGTCTGTGTTTGGAGGGTAGGTTTGAGAAGATTTAGATAGTTTGTTAAATATTTTGTTGTATTTAATTAAAATGTTTAGATTTTAGATTAATTTAAAATGTCATCTTAATTA 1934 39.92 MSVVNGGTPTQSANPNMGREMPKVVVIMGPTGSGKSRLAIDLASLFPVEIINADSMQVYRGLDVLTNKVPPEDQNGVPHHLLGTVSPDVEFTAKDFRDSAVPVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSTENISGSCSIYHGDEELGIELDEGRDDLKYDHNHLKKIDPVSANRIHPNNHRKINQYLSLYYRTGVLPSILFQGKAAENWGQADNFRYNCCLICVDASVPQLDGHVNSRVDSMMTAGLLDEVYDIYNPNANYTRGLRQAIGVREFEEFLRYHVPKGRCEDDSAGFSPKNLMECNEILKENMRSIPNSPSDGQPSLLLKEAIDNVKLNTRRLVRRQRRQLRRLETLFGWKIHYVDSTEYITSKVEDSWTAQVVEPAVHIIRSFLKDGCSATETMNPHNSGQTIKKDVWTQYICQLICTGLWE 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3070272 3092755 + XM_039039203.1 Bhi08g00070 40403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00070 437 TIGRFAM miaA: tRNA dimethylallyltransferase 24 287 IPR018022 GO:0008033
Bhi08g00070 437 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 401 IPR039657 -
Bhi08g00070 437 Pfam IPP transferase 57 356 - -
Bhi08g00070 437 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 401 - -
Bhi08g00070 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 130 IPR027417 -
Bhi08g00070 437 Gene3D - 151 211 - -
Bhi08g00070 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 268 IPR027417 -
Bhi08g00070 437 Hamap tRNA dimethylallyltransferase [miaA]. 24 380 IPR018022 GO:0008033
Bhi08g00070 437 Gene3D - 22 426 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00306 Bhi-Chr3:6713715 Bhi08g00070 Bhi-Chr8:3070272 7.10E-42 dispersed
Bhi08g00070 Bhi-Chr8:3070272 Bhi08g00072 Bhi-Chr8:3070272 0 dispersed
Bhi08g00070 Bhi-Chr8:3070272 Bhi08g00071 Bhi-Chr8:3070272 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00070 K00791 - csv:101202758 734.561