Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00072 AAATTGAATCATCGGAGAAGCGATGAGCGTTGTAAACGGAGGCACTCCAACGCAGTCTGCAAATCCGAACATGGGAAGAGAAATGCCGAAGGTGGTGGTGATTATGGGGCCGACTGGTTCTGGGAAGTCTCGTCTCGCTATTGACTTGGCTTCACTCTTCCCCGTCGAGATCATCAACGCCGACTCTATGCAGGTTTATCGAGGATTGGACGTTCTCACAAACAAAGTTCCTCCCGAAGATCAAAATGGAGTCCCGCATCATCTTTTAGGTACAGTGAGTCCAGACGTTGAATTCACGGCTAAAGACTTCCGAGATTCTGCCGTTCCTGTTATCGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACGAATTATTATATACAGGCCCTTGTTAGCCCGTTTCTTCTGGATGATTCTACAGAAAATATTAGCGGAAGTTGCTCCATTTATCACGGAGATGAAGAGCTGGGTATTGAGTTGGATGAGGGAAGAGATGATTTGAAGTATGACCATAACCATCTTAAAAAGATTGATCCAGTTTCAGCTAACAGAATCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGCGTTCTTCCCAGTATACTTTTTCAAGGAAAGGCTGCTGAGAATTGGGGTCAAGCTGATAATTTCAGATACAATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTAATTCTAGAGTTGACAGCATGATGACTGCTGGATTACTTGATGAGGTCTATGACATTTACAATCCAAATGCAAACTATACTAGAGGATTACGTCAAGCTATTGGTGTTCGGGAGTTTGAGGAGTTTCTGAGATATCATGTACCCAAAGGTAGATGCGAAGATGATAGTGCTGGGTTTAGTCCAAAAAATTTGATGGAGTGCAATGAGATTTTGAAAGAGAATATGAGGTCAATCCCAAATTCACCAAGTGATGGCCAACCCAGTTTGCTACTGAAAGAAGCTATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAGGAGGCTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGAATATATAACATCCAAAGTGGAGGATTCGTGGACTGCACAAGTCGTTGAACCTGCAGTCCACATAATTAGGTCTTTCCTTAAAGATGGTTGTTCAGCGACTGAGACAATGAACCCGCATAACTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAGTATATATGCCAGGCTTGTGGGAATAAAGTATTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACGCATCGGAAACGAATGTATCGGCTTAAGAAGAAGTGTGAAGCGCTTTCCTTGCTGCAACAGAAACTATCTCCTCAAGAGTAGCTCTTATGGCTTGCAGTTTTGAGCGCCCACTTGGAGACTTGGGATCTCAACAGGAAATGCAAAGGTTGCAACAATGAAAGTCGGCCGGGCTTTAAGTTCTTAGGAAGAGCTATACGAGGCAACTCACGTACGGTTTGGGAGTCGAGCCCCAGCACAAGGACTTAGATCAACACTTATTTAATAGCCGTCATCAATTGGAAGCGAACAAGATGGTGATGGATTGTGATTGGTCAAAACCTATTGCGACCCATCCAGAATGGCCATACGTACTAAGACCTTATTCACACAGCGAAGAGAGGCCGAATTTCCATTTTATATATTTGCGTGAAATAAAAAGTTGGCTTGGCTGGTTGGTAGTGAGGCATGCTCAAGCCTCATCCATGGGCTAAACTTTTGTCTTGGGTTCAATTGACAAAAGTTCAATTCCTAGGGCTACAAGTTCATTTTATTATTATTATTATTTTTATATTTTATTCTTTTC 1934 42.71 MSVVNGGTPTQSANPNMGREMPKVVVIMGPTGSGKSRLAIDLASLFPVEIINADSMQVYRGLDVLTNKVPPEDQNGVPHHLLGTVSPDVEFTAKDFRDSAVPVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSTENISGSCSIYHGDEELGIELDEGRDDLKYDHNHLKKIDPVSANRIHPNNHRKINQYLSLYYRTGVLPSILFQGKAAENWGQADNFRYNCCLICVDASVPQLDGHVNSRVDSMMTAGLLDEVYDIYNPNANYTRGLRQAIGVREFEEFLRYHVPKGRCEDDSAGFSPKNLMECNEILKENMRSIPNSPSDGQPSLLLKEAIDNVKLNTRRLVRRQRRQLRRLETLFGWKIHYVDSTEYITSKVEDSWTAQVVEPAVHIIRSFLKDGCSATETMNPHNSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRMYRLKKKCEALSLLQQKLSPQE 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3070272 3094520 + XM_039039202.1 Bhi08g00072 40405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00072 476 Gene3D - 151 211 - -
Bhi08g00072 476 Pfam IPP transferase 57 356 - -
Bhi08g00072 476 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 401 IPR039657 -
Bhi08g00072 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 268 IPR027417 -
Bhi08g00072 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 130 IPR027417 -
Bhi08g00072 476 Gene3D - 22 423 IPR027417 -
Bhi08g00072 476 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 401 - -
Bhi08g00072 476 Gene3D Classic Zinc Finger 424 465 - -
Bhi08g00072 476 Hamap tRNA dimethylallyltransferase [miaA]. 24 380 IPR018022 GO:0008033
Bhi08g00072 476 TIGRFAM miaA: tRNA dimethylallyltransferase 24 287 IPR018022 GO:0008033
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00070 Bhi-Chr8:3070272 Bhi08g00072 Bhi-Chr8:3070272 0 dispersed
Bhi08g00072 Bhi-Chr8:3070272 Bhi09g01027 Bhi-Chr9:23702114 5.86E-24 dispersed
Bhi08g00071 Bhi-Chr8:3070272 Bhi08g00072 Bhi-Chr8:3070272 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00072 K00791 - csv:101202758 826.239