Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00114 TGAATCACCCACGCGATTTGAAGAAGAAACCTCTCTTTTTGTTCTATTGATTTCTTCATCGAAAATTTCAAGTAAAATGTCTCGCAGAGGTGGTGGTGGTGGTGGCGGCGGCGGCGGCCGTGGTTCTGGTGGTCGTGGAGGACAGCCGTCTCCGGCTATATCCCGCGGCGGAGGTGGCAGAGGCGGTGGTGGAAGAGGTGGACGAGGCGGTGGAGGGAGAGACGGAGGTAGGGTAGGTCATCCTGCTACTCAGCAGTTTCCTTCTCCAACTCCACAGCCTACTCCGATTGCTTCCCCTCCTCCCCAGACTTCAACAAGAGCATCTTCTTCTTCCTTATCTGGAACTACTCTCTCACAGTCTGAAGTTTCGAAGATCGAGGCACAATTGGAGAAGATGACATTGACGCCACAGCAAGTTCCGCCGTCTTCATCTAAAGATTTGGCTGTGGCGAAGCGGCCGGGATATGGAGCCGTCGGGTACAAAGTTCTTCTTCGAGCCAACCATTTTCTGGTTCAAGTTGCAGACAAAGATCTCTACCATTACGATGTTTCTATTACACCTGAGGTTTCATCCAAAAAGGTCTGCCGAGATATAATAAACCAGCTTGCAACAATGTATAGAGAATCTCATCTAGGTGGAAGACAAATAGCGTATGATGGAGGAAAAAGTGTTTACGTTGCTGGTCAGCTTCCATTTTCGTCCAAAGAGTTCACGATTAAATTAGTCCGTAAAGATGATGCAGGATCTTCCCAACCATCAAGGAAAGAACGTGAGTTCAAAGTATCTATCAAATTTGCAGCCAAGCCAGACCTCCATCATCTACAACAGTTTTCACATGGACGACGGCGAGATGCTCCACAGGAGACTATACAAGTTCTTGATGTTGTTTTGAGAACAAAACCATCTATCGATTACACAGTTGTTGGAAGGTCATTTTTCTCGCAAAATTTTGGGAAACCGGGTGAACTCGGTAATGGTGTAGAGTATTGGAGGGGATATTACCAAAGTCTACGACCTGTACAAATGGGTCTATCTTTGAATATAGATATTTCTGCTAGGTCATTTTATGAAGCAATATGTGTAACGGACTATGTTGCAAAACACTTCAACCTAAGAAATTTCTCCAAGCCAATATCTGATCAGGACTGTCGCAAGATCAGAAGGGTACTTAAAGGTGTGAAGGTGGCATTAACATGTACGGAGCATGGCAGGACCTACAAAATTACTGGGATATCGTCAGAGCCTGTAAACCGATTAATGTTTACTCTTGATGATCAGAGAACCCGAATCTCTGTTGCGCAATACTTTTGTGAAAAATATGGTGTTGTGCTCCAATTTCCATCTCTACCAGCTATACAAGCTGGTAATGATGCAAAGCCCATCTATTTGCCGATGGAGGTTTGTAGGATTGTTGGTGGGCAGAGGTATACCAAAAAATTGAATGAACGCCAAGTAACTGAGATGTTAAGAGCGACTTGTCAGAGGCCTACAGATAGGGAACACAGTATAACAGAGATGGTTAGAAAGAATGATTACGCTGAAGATAAAATTGTTAAGGATTTTGGCATTGACGTCGTAAAACAGTTATGTGATGTTCATGCTCGTGTTTTGCCATCCCCAATGCTCAAATATCATGAAACTGGCAAAGAATCAAGAGTTGATCCAAGGATGGGTCAGTGGAATATGATTAATAAGAAAATGATCAATGGTGGTAGAGTTGATTATTGGGGTTGTGTGAACTTCTCTGCACGGTTGGACCCAGGCTTGCCATCTGAATTTTGCCATCAGTTGGTTAGCATGTGCATTAGCAAAGGAATGGTTTTCAACCCTACTCCACTGTTTCCTGTACGTACTGCACATGCAAACCAAATTGAAGGGGTTCTTAAAGACATTCATAATCAGTCTGTAAGAAGTTTGGGGCCCCAGCGCAAGTCTCTTCAGTTGCTCATAATTATTTTACCTGATATTTCAGGTTTCTACGGGAAGATCAAAAGGATATGCGAGACCGAGCTTGGAATTGTTTCACAATGTTGCCAGCCTAGGCAAGCTCAAAAGCTAAACAAGCAGTACTTTGAAAATGTGGCCCTCAAAATCAACGTTAAGGTTGGGGGAAGAAACAATGTCCTAAACGATGCTATTCAGCGAAAAATTCCTCTTGTTACGGATATGCCTACGATAATCATTGGAGCAGATGTAACACACCCACAACCAGGAGAGGACTCCAGTCCTTCCATCGCAGCTGTTGTTGCCTCAATGGACTGGCCCGAGGTAACAAAGTACAGAGGAATTGTTTCAGCTCAGGCTCACCGTGAAGAAATTATACAAGATTTGTACAAAGAGATTCAAGATCCTCAGAAAGGGTTGGTGCGTGCAGGGATGATTAGGGAGCTGTTCATTGCTTTTAGAAGGTCGACAAATATGAAACCGCACAGAATAATATTCTACAGAGATGGTGTGAGTGAAGGACAGTTCTCTCAAGTTCTATTTTATGAGGTGGATGCAATCAGGAAGGCATGTGCCTCGCTTGAAGATGGTTACCAGCCCCCAATAACCTTTATTGTGGTGCAAAAGAGACATCATACCCGTTTTTTCCCTACCAGCCGGGATACTGATCGGAGTGGAAACATCCTTCCAGGTACTGTTGTCGATACGGATATTTGTCATCCAACTGAATTTGATTTCTATTTAAACAGCCATGCTGGCATTCAGGGGACAAGTAGACCAACACATTATCATGTTCTGTATGATGAAAACAAATTTAGTGCCGATGCAATGCAAATACTTACTAATAATCTATGCTACACGTATGCACGGTGCACACGGTCTGTTTCCATTGTTCCACCAGCATACTACGCCCATCTTGCAGCATTTCGTGCTCGATATTACATGGAGGGTGATTCATCCGACAGTGGTTCCATGAGTTCAGGTGGTGGGAATGTAGAGATTCAACAACTGCCGAGCATAAAAGAAAATGTGAAGGATGTCATGTTTTACTGTTGAGCTTGAGTGTTGTTCTCAGCTTGGGTTGTGGTGGTTGTTTGGTTTGGTTTGGTTTGGTTGCTTGGGGTATGAGTTTGGGTTTTTGATGCTCTTCTTTGTGGCCTTATTTTGTGGTACATATCTCCCAAAATTGGTGGCTTTCTTTATGGACAATTTGAAGCGCCAGGTAGAAAATACTTTCAGAGCTCTGGTACTATGCTTTTTGGGTTTTGCAACACAATTTGCCTGTACATATGCATGTAAATACCAGTAGTTTTATACCCCAAATTTAACCAGGTTTATAGGAATAGTTCTGCAAATTTTTATACTTTTCTAATTTGTTGTGTCGATTACAGAAAATTATGCCTAGTTAATTCTGCAACTTGTCCA 3370 43.09 MSRRGGGGGGGGGGRGSGGRGGQPSPAISRGGGGRGGGGRGGRGGGGRDGGRVGHPATQQFPSPTPQPTPIASPPPQTSTRASSSSLSGTTLSQSEVSKIEAQLEKMTLTPQQVPPSSSKDLAVAKRPGYGAVGYKVLLRANHFLVQVADKDLYHYDVSITPEVSSKKVCRDIINQLATMYRESHLGGRQIAYDGGKSVYVAGQLPFSSKEFTIKLVRKDDAGSSQPSRKEREFKVSIKFAAKPDLHHLQQFSHGRRRDAPQETIQVLDVVLRTKPSIDYTVVGRSFFSQNFGKPGELGNGVEYWRGYYQSLRPVQMGLSLNIDISARSFYEAICVTDYVAKHFNLRNFSKPISDQDCRKIRRVLKGVKVALTCTEHGRTYKITGISSEPVNRLMFTLDDQRTRISVAQYFCEKYGVVLQFPSLPAIQAGNDAKPIYLPMEVCRIVGGQRYTKKLNERQVTEMLRATCQRPTDREHSITEMVRKNDYAEDKIVKDFGIDVVKQLCDVHARVLPSPMLKYHETGKESRVDPRMGQWNMINKKMINGGRVDYWGCVNFSARLDPGLPSEFCHQLVSMCISKGMVFNPTPLFPVRTAHANQIEGVLKDIHNQSVRSLGPQRKSLQLLIIILPDISGFYGKIKRICETELGIVSQCCQPRQAQKLNKQYFENVALKINVKVGGRNNVLNDAIQRKIPLVTDMPTIIIGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQAHREEIIQDLYKEIQDPQKGLVRAGMIRELFIAFRRSTNMKPHRIIFYRDGVSEGQFSQVLFYEVDAIRKACASLEDGYQPPITFIVVQKRHHTRFFPTSRDTDRSGNILPGTVVDTDICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFSADAMQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYMEGDSSDSGSMSSGGGNVEIQQLPSIKENVKDVMFYC 974
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4822558 4829512 + XM_039038889.1 Bhi08g00114 40447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00114 974 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 959 - -
Bhi08g00114 974 SMART DUF1785_2 281 333 IPR014811 -
Bhi08g00114 974 SMART Piwi_a_2 623 939 IPR003165 GO:0003676
Bhi08g00114 974 Pfam PAZ domain 357 464 IPR003100 GO:0005515
Bhi08g00114 974 MobiDBLite consensus disorder prediction 61 75 - -
Bhi08g00114 974 Pfam Mid domain of argonaute 530 608 IPR032473 -
Bhi08g00114 974 Pfam Argonaute linker 2 domain 473 519 IPR032472 -
Bhi08g00114 974 Pfam Piwi domain 625 938 IPR003165 GO:0003676
Bhi08g00114 974 ProSiteProfiles PAZ domain profile. 334 447 IPR003100 GO:0005515
Bhi08g00114 974 Gene3D paz domain 328 451 - -
Bhi08g00114 974 CDD PAZ_argonaute_like 333 446 - -
Bhi08g00114 974 Gene3D - 511 686 - -
Bhi08g00114 974 SMART PAZ_2_a_3 336 469 IPR003100 GO:0005515
Bhi08g00114 974 SUPERFAMILY PAZ domain 330 487 IPR036085 GO:0005515
Bhi08g00114 974 SUPERFAMILY Ribonuclease H-like 618 940 IPR012337 -
Bhi08g00114 974 Gene3D - 691 974 IPR036397 GO:0003676
Bhi08g00114 974 ProSiteProfiles Piwi domain profile. 623 939 IPR003165 GO:0003676
Bhi08g00114 974 Pfam Argonaute linker 1 domain 283 332 IPR014811 -
Bhi08g00114 974 MobiDBLite consensus disorder prediction 1 96 - -
Bhi08g00114 974 MobiDBLite consensus disorder prediction 76 96 - -
Bhi08g00114 974 Pfam N-terminal domain of argonaute 136 272 IPR032474 -
Bhi08g00114 974 CDD Piwi_ago-like 491 938 IPR045246 -
Bhi08g00114 974 PANTHER PROTEIN ARGONAUTE 1A 42 959 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00114 Bhi-Chr8:4822558 Bhi08g01996 Bhi-Chr8:57491320 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00114 K11593 - csv:116403995 1601.65