Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00157 TCACTTTCTTTTGAATAAGATGTGATTTTTTTTTTGGAAATCATGATTTCAAATTCTCAAATGCTTTCTCTTCCTTCACAACAGCCTTTGGTTTCATCTTCTAATGATCATCATGAAACCCTAGATAACCTTCTTTCTTCTTATTCCCAATCAAGCAACTCTCTCCTTTATAACCTCTCAATTTTGAAGGAGAAACTCCACCAAATCCAATCTATAGTCAACATCTCTATCTACAACCTTCAACACTCAACCGAATCTCTACCCTCGACCCTGGCCCCGTCGCCACCGCTAGTGGCGACGACTACCACCGTCAATTCTTTGATCCAAGAACTCATCATGGCTGCTTCCTCCATGTTGTTCACATGTCAACAAATGGATAACCTCGTCGGAAACGCCTCCCTACACAACAATAGTGTTGATAACAACCTCCACGGTCAACAACACCACCACCACCAGCAGCGTCAAGGTCCCGTTGACGATGACAATCGACGATCCCTTTTCAACATAGCCAACAACCATCATCACCAACATCAAGAATGGTACAATACGACATCTACTAATTATAACAACGACAACAACAATAGTAGAACAATGACAACAAAAACAACACATGACCATCGAAATTCGATCAATATCATCGAGTTAGACGCATCGGATCTTCTAGCAAAATACACTCATTATTGTCAAATTTGCGGGAAAGGGTTCAAGCGAGACGCAAACCTAAGAATGCACATGCGAGCGCACGGGGACGAGTACAAAGCAAGCGGGGCATTGAGCAATCCAGAGAAGAGCCATAGAAGGGACTTGAATAATATAAGCAAGATGGGGACTAAATATTCATGTCCACAAGAAGGCTGCAGATGGAATCAAAAACATGTGAAGTTTCAGCCATTGAAATCACTGATTTGTGTGAAAAATCACTTCAAAAGAACTCATTGCCCCAAAATGTATGTTTGTAAACTGTGTAGTAGGAAGAAATTTTCAGTACTTTCTGATTTGAGGACTCATGAGAAGCACTGTGGGGATGTGAAATGGCTATGTTCATGTGGAACAACATTTTCCAGGAAAGATAAGCTGATGGGTCACGTCGCTTTGTTTGTCGGGCATACTCCGGCGATCGGCTCGTTGACAAAATTTTTGGGAAAACAAGAACATCAGTATGTTCATTCATTCTAATGAATTTCACTGAACTATATGAAATTATATATATCCTTGTATATATGCTATGTATGGAGGTTTTTCCTTCTGTTTTTGTTTTTGTGTATAAGTTTAGGAAGATCTGCTTTGTTGGGAGATGAATTTGCTTTAACTTTCGGCTAATATTGAGTGGCTTATTGCGTTATGTTTGTTCTTGTTTAACTTGAT 1365 39.85 MISNSQMLSLPSQQPLVSSSNDHHETLDNLLSSYSQSSNSLLYNLSILKEKLHQIQSIVNISIYNLQHSTESLPSTLAPSPPLVATTTTVNSLIQELIMAASSMLFTCQQMDNLVGNASLHNNSVDNNLHGQQHHHHQQRQGPVDDDNRRSLFNIANNHHHQHQEWYNTTSTNYNNDNNNSRTMTTKTTHDHRNSINIIELDASDLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRRDLNNISKMGTKYSCPQEGCRWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRTHEKHCGDVKWLCSCGTTFSRKDKLMGHVALFVGHTPAIGSLTKFLGKQEHQYVHSF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5639316 5640680 - XM_039039586.1 Bhi08g00157 40490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00157 377 Gene3D Classic Zinc Finger 186 270 - -
Bhi08g00157 377 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 21 371 IPR044300 GO:0010044|GO:0010447
Bhi08g00157 377 MobiDBLite consensus disorder prediction 130 147 - -
Bhi08g00157 377 Pfam Zinc finger, C2H2 type 212 234 IPR013087 -
Bhi08g00157 377 SMART c2h2final6 212 234 IPR013087 -
Bhi08g00157 377 SMART c2h2final6 265 298 IPR013087 -
Bhi08g00157 377 SMART c2h2final6 303 325 IPR013087 -
Bhi08g00157 377 MobiDBLite consensus disorder prediction 123 181 - -
Bhi08g00157 377 PANTHER OS08G0562300 PROTEIN 21 371 - -
Bhi08g00157 377 MobiDBLite consensus disorder prediction 1 23 - -
Bhi08g00157 377 MobiDBLite consensus disorder prediction 155 181 - -
Bhi08g00157 377 SUPERFAMILY beta-beta-alpha zinc fingers 210 237 IPR036236 -
Bhi08g00157 377 ProSitePatterns Zinc finger C2H2 type domain signature. 214 234 IPR013087 -
Bhi08g00157 377 Gene3D Classic Zinc Finger 301 351 - -
Bhi08g00157 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 212 239 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00157 Bhi-Chr8:5639316 Bhi09g01582 Bhi-Chr9:42615796 1.32E-77 dispersed
Bhi08g00157 Bhi-Chr8:5639316 Bhi05g01393 Bhi-Chr5:48916748 1.78E-23 transposed
Bhi08g00157 Bhi-Chr8:5639316 Bhi03g01682 Bhi-Chr3:35372763 3.11E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1621 PF00096 zf-C2H2 9.70E-05 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00157 - - csv:101203636 619.772