Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00196 TTATGGATAATTATTGGCTAGTTATCACCGGCTTTAGAGGTAGACTGGTAGATTTTACCAAACTAAGAGAGAGAAAGAGAGATATGATAGCCATTGAATTCAGATTTGAGATCAGTTTTACGTCTAAACGTCAGCTTCAATTTGCTGCCCGGCTCTGATGGTAATTACGATATTGCTTTTTATGGTTTATCGCAATATGGTATATTAACATTGGGAATTTGGGGGACGGAAGCAATTTTATATGGTGTTATTGGAAGTGTGGGTTTTTAAAAAATTAGGTGGATGGAACATAGTTATGGTTTTGAACAGCATGTTGCTCAACAAAGTCGGCGTGATAAGTTAAGAGTTCCGCAGAATTATTTGCGAGTGGGGGAATTATCAAGAAACACTGATGAACAATTGAGTTTTCACAACTCGGAGCATTTGGGGCTCGAGCTGGATCTTGTTAGGATTCAAAGTTTTAACAAGGATGCTATTTTGCCTCATGATCACTTGTCTTCATTATCTTCCGAAATGATCAATTTCTCGAGAGATTCCAATGTTTTATCGCACCAAAGGGACATGATGTTGCGTCAAGAACTGGCAGACCCAGCTCAATGCAGTAGACAAATTGTGACAGATGCTTCTGGTGGAATTGTAAATAATGGTGTTGATTATTGGAAAAGCTCTCATCAAAGCTGTGATTGGGTGGTGAACTGTGGAAGTAATTCTTTTGGAGGTGAAATGTTGAATCAGGAAGTAACTGATTCTACAGTGTATTCACTGAAGCCAACTTGCATTGGATTCCAAACTTCTTCCTCTTTTAACAATCCGTCCAATGAGACATTCAATCAGGATGGACAAAAGCGTATAGGAGGAGAATTGCATTTGCCTCCAATTTACCAAAATACCCTTCAGGATGTTGTTACATCAGCTTCTATTCGAACACAGGGCCTGGAAATGACATCCATTGTGCAGCATAATTTCACTGAAATTAACCAAACTGCCGCTTGTGAAGGCAGTGGGAATGAGCTTGCTCTTCTTCCAGTGTACAGGGATCAGCCAAATGTGTTGCCTTATGACAGTACTGGTTCTTGGAGTGATAGAACTTTCTATAACTGCCGCAGCTGGATTGGTGAATTGGGCTCTATTGCTAGGAAAACCGATGAAGAGTTGAGGACGTTTATGAATGATTCCACTCCACAAGGTCTAGCCCTGTCGCTGTCTTCGAATCCGCCGTCTAAATTACCCACTGCACAGTTTGAAGAATCAGAGGAATTACAGGAAAGTATCACTGTGTTAAAAAATTCCCAAGAATCCAAAGCAGTCAAATCTGAGAGTTTGTGTAGATTACCAAAGCCAACATCTATTGGTAATAAAAATTATGGGAAATCTCTTCAAGATGTGATGGGCGTTCCTGTGAACCCATATAGAAACACCGGCCCTCTTGGTCCCTTTACTGGGTATGCAACCATTTTAAAGAGTTCAAAATTCTTAAAGCCTGCCCAACTGCTGTTAGATGAATTTTGTGGCTCAAATGGTCATTATAAGTTTGTCCAACCATGTGAGGTGTTTGAGAAGACACCTGGGGAAGTTGGTGTCTCAGCAGCCCTTAATGCATTTAGAAATGAGGTTGTTAAGGAAAATAGTTCATGTGCAGATGCCTCTACATTCTGTGGTTCGAATGAATCAAATGTTAGTGGCATTGGAAGCATCTCTTCTGAACATCATCAACCGGAGTATCAGCAAAAGAAAGCAAAACTTCTATATATGCTCGAGGAGGTTTGCAGAAGATACAAACAATATCATCAGCAAATGCAAATGGTAGTTTCATCCTTCGAATCAGTAGCTGGTCTTAGTTCCGCAACACCCTACATTTCCCTGGCGCTCAAGACAGTCTCAAGACACTTCCGGTCTCTAAAGAATGCCATCTCGGAACAACTGAAGTATTTGAGGAAGGTACTTGGTGAGGATTTGTCATCCCCCTCTGCTGGAACAAGCGGCAGCAAAGGTGATGCAAATTCGGCTAGGTTGAAATACATGGAACAGAGCTTCCAAAAGCAAAAATCTGGCATTGTCAATATTGGATTCCTCGAATCCCAAAATGCATGGAGGCCACAGAGAGGTTTGCCTGAACGTGCTGTGGCAATTCTTAGAGCCTGGCTCTTTGAGCATTTTCTTCACCCATACCCCACAGACACAGATAAACACATGTTGGCCACTCAAACAGGCCTATCTCGAAACCAGGTGTCTAATTGGTTCATAAATGCCCGAGTGCGGGTGTGGAAACCAATGGTTGAAGAGATACACATGCTAGAAACCAAGGGCATGGCAGAAATGAACAACAAAAGCCATGATACGAGAGATGGAAGTTCTACATTAGAAAACACAGCCGGTTGGACCAGTAATGAACACCAGCCTCTAAAAAACCATGGTGTTGCAAATGAAATGGCTAGTCATCATTTGCAGTGCCTGGGCATAGATTCCTCGAGTGGTGACAGAAATGAACTCGGCAGCAGAGACCAACAGTGGGATCAAGGAAAACAATCCAAATTGGACAATGGGGTTCAGTCCAACATGGAAGGGGAATTGATGGGGTTTATGCCATATCAGGCCAGTGCAGCTGAGGTTGGAGGACTCGGAGCTGTCTCTCTAACATTAGGCCTTCGCCACCGAGTCGAGAGTGCCCACCATCAACAGCAGCGACATCAATTGCAGCAACAAGATGACCAACTAATACGCCACTATGGAAGCGAAATGATCCATGATTTTGTGGGGTAATTTGGCTCACCAACTTGTCTTTGATGACAAAAGCAGAAGAAAGGGACTATGACGCCATAGTTTAACATATTCCTATTCGATACTAACAATCAGCCCACAAATATCCGTTGGTTTCAAGAACGGAAAATCGGGCTACACATTATCTATCACTGTTGAAGAGAGAAGAGACAGATATTATGATATTTGATTGGGTGGGTGGGGACAACGTGTAGGAAAGTTAGAGTTGTCAGTAGGTTGTTTAAATACCGTTTGGGTATTTAGTTGAACACTGGAAAACTATAACTGTAGAAAAGTTGAATTCTTAAATGAAGTTTTATTTTTCTTGTGAA 3089 41.89 MEHSYGFEQHVAQQSRRDKLRVPQNYLRVGELSRNTDEQLSFHNSEHLGLELDLVRIQSFNKDAILPHDHLSSLSSEMINFSRDSNVLSHQRDMMLRQELADPAQCSRQIVTDASGGIVNNGVDYWKSSHQSCDWVVNCGSNSFGGEMLNQEVTDSTVYSLKPTCIGFQTSSSFNNPSNETFNQDGQKRIGGELHLPPIYQNTLQDVVTSASIRTQGLEMTSIVQHNFTEINQTAACEGSGNELALLPVYRDQPNVLPYDSTGSWSDRTFYNCRSWIGELGSIARKTDEELRTFMNDSTPQGLALSLSSNPPSKLPTAQFEESEELQESITVLKNSQESKAVKSESLCRLPKPTSIGNKNYGKSLQDVMGVPVNPYRNTGPLGPFTGYATILKSSKFLKPAQLLLDEFCGSNGHYKFVQPCEVFEKTPGEVGVSAALNAFRNEVVKENSSCADASTFCGSNESNVSGIGSISSEHHQPEYQQKKAKLLYMLEEVCRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKTVSRHFRSLKNAISEQLKYLRKVLGEDLSSPSAGTSGSKGDANSARLKYMEQSFQKQKSGIVNIGFLESQNAWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGMAEMNNKSHDTRDGSSTLENTAGWTSNEHQPLKNHGVANEMASHHLQCLGIDSSSGDRNELGSRDQQWDQGKQSKLDNGVQSNMEGELMGFMPYQASAAEVGGLGAVSLTLGLRHRVESAHHQQQRHQLQQQDDQLIRHYGSEMIHDFVG 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7981189 7985782 - XM_039039173.1 Bhi08g00196 40529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00196 825 MobiDBLite consensus disorder prediction 725 753 - -
Bhi08g00196 825 ProSiteProfiles 'Homeobox' domain profile. 600 663 IPR001356 GO:0003677
Bhi08g00196 825 SMART prehox3 386 545 IPR006563 -
Bhi08g00196 825 Gene3D - 606 668 - -
Bhi08g00196 825 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 35 792 - -
Bhi08g00196 825 MobiDBLite consensus disorder prediction 680 702 - -
Bhi08g00196 825 SMART HOX_1 603 667 IPR001356 GO:0003677
Bhi08g00196 825 Pfam Associated with HOX 391 544 IPR006563 -
Bhi08g00196 825 Pfam Homeobox KN domain 620 659 IPR008422 GO:0003677|GO:0006355
Bhi08g00196 825 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 8 35 792 - -
Bhi08g00196 825 SUPERFAMILY Homeodomain-like 604 669 IPR009057 -
Bhi08g00196 825 CDD homeodomain 603 664 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02053 Bhi-Chr3:44246944 Bhi08g00196 Bhi-Chr8:7981189 4.57E-66 dispersed
Bhi08g00196 Bhi-Chr8:7981189 Bhi11g01922 Bhi-Chr11:54758166 1.47E-76 dispersed
Bhi08g00196 Bhi-Chr8:7981189 Bhi08g00197 Bhi-Chr8:7981189 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1623 PF07526 POX 3.20E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00196 - - csv:101214235 1513.43