Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi08g00274 | CAGCCAAAACCAACTCCATTTCTCTCTCTATTGAGTCTAAAATGGAGTGCTGTGAGGCAAAATCCGGCCAAGCTTCAACTATCTTCCTCTCTCAGTCGCCGTCGTCGTCTCCTTCACCGCCGCCGAGTATTCAGACCGGCGTGGTGGTCAGTCCGTGTGCGGCGTGCAAGATTCTGAGGCGGAGATGCGCAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCTTCTGATCCTCTCAAATTCACCATTGCTCACCGTGTCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAAAGGGCTGATGCAGTGAGTAGTTTAGTATACGAAGCAAATGCAAGAATTAGAGATCCAGTTTATGGGTGTGCAGGGGCCATTTGCCAGCTTCAGAAACAGATAAACGAATTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAATATCCACTGCCGCCAAGCCAATTTGGTGGCACTGATTTGCAAGGAATTAACCCAACTGCCGCCACCGATGTCGCCGCTGCCGGACCACCGCTCACTTGACAACAATTTCAACATTGCCACTCCTCAAAGCTACCAAGGCTACACATCTTTGTTTGAGGATAGCAATATTTGGGACCCTCTTTGGACATGAGAAAGGAAAAAAAATGTTGAACATGGCTGCAAAGGGGGAGAGATTTCTAAGACAAAGGTTTTGGAAAGTCAAACTTGGATTGGTTTTAAGTAGAATATATGAAACTGAAAGTCTAGTAGTTGAATTTTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTTAAAACCAAGAAAAGTGGAGTGAAGAAAAAGGACTGATGTTTACTGTACTAGATTAGTGCAAAAGTATTTATATCTTAGTATATATCTCTTTTCTTTTTTTGGTTACCTACCATTAGCTTCTTAACATTGATGTGTCAAGAAAAGAAACATCTTTGTCAAAATGTCTCAAACTTGAAGTGGTGTTGATGGTTGCTTCCCCCTTTTTGAAAATGACTAAAGATGCTCCCTTTATGAGATC | 1067 | 43.67 | MECCEAKSGQASTIFLSQSPSSSPSPPPSIQTGVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEANARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCRQANLVALICKELTQLPPPMSPLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 10630356 | 10631825 | - | XM_039039084.1 | Bhi08g00274 | 40607 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi08g00274 | 202 | Coils | Coil | 117 | 144 | - | - | |
| Bhi08g00274 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1 | 19 | 201 | - | - | |
| Bhi08g00274 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 19 | 201 | - | - | |
| Bhi08g00274 | 202 | Pfam | Lateral organ boundaries (LOB) domain | 38 | 135 | IPR004883 | - | |
| Bhi08g00274 | 202 | ProSiteProfiles | LOB domain profile. | 37 | 138 | IPR004883 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi08g00274 | Bhi-Chr8:10630356 | Bhi08g00311 | Bhi-Chr8:12151894 | 2.58E-91 | dispersed | |
| Bhi08g00274 | Bhi-Chr8:10630356 | Bhi10g00963 | Bhi-Chr10:19755429 | 3.68E-53 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1631 | PF03195 | LOB | 1.50E-41 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi08g00274 | - | - | csv:101222262 | 328.561 |