Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00311 TTGGTTCTGATGAAGTCTCATCTCTCCGCCACTCTCTTCCGCTAAAATGGAGAAAAGTGAGCCAAATACGGCGGCGGCCACGACGGCGGTTAGTCCGTGTGCAGCTTGCAAAATTCTCCGGCGGAGATGCCGAGAGAATTGCGAATTGGGCCCGTATTTTCCCCCAACCGAACCTCTCAAATTCACTATTGCTCATAGAATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTAAATCGCAAAGAGAAGATGCCGTGAACAGTATGGTATACGAGGCAAGTGCAAGAATAAGAGATCCAATTTATGGATGTGCAGGCTCAATTTTCCAACTTCAAAGACAAATAAATGACCTACAAGGTGAGTTAGCCAAGGCTCAAGCAGAGATTCTCAAGATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTATGATCATCAATCACTTAATGATAATTACAACATTGCTAGCCCTCAAAGTTATCACAGCTCTTCATACTTATTTGAGGATAGTAATATTTTGGAGCCTCTTTGGACTTAGATTACAATTAAGGGTGGATTATTTAGGTTTTAATTTTCAAAAGAGAACAATGATACACACTTTGATAAATAATATTTAGTCTAGTTTACAATCAATGTTATAGATCGAGCGTTGAGACACTACCTATACAAATTTTCTTACTTGAATATATTTACAAGCGTCGAGATGTTTTAAATAGCGGCTCAACGCTACTTTCTCGTATATTTGACTTTAATAATCTTATTTAGGATTTTTC 821 38.98 MEKSEPNTAAATTAVSPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHRIFGASNIIKLLQDLPKSQREDAVNSMVYEASARIRDPIYGCAGSIFQLQRQINDLQGELAKAQAEILKMQCQQANLMTLICKELAQMPQPPMYDHQSLNDNYNIASPQSYHSSSYLFEDSNILEPLWT 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12151894 12154249 - XM_039037988.1 Bhi08g00311 40644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00311 179 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Bhi08g00311 179 Coils Coil 96 123 - -
Bhi08g00311 179 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Bhi08g00311 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 178 - -
Bhi08g00311 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 12 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00274 Bhi-Chr8:10630356 Bhi08g00311 Bhi-Chr8:12151894 2.58E-91 dispersed
Bhi08g00311 Bhi-Chr8:12151894 Bhi10g00583 Bhi-Chr10:12863761 2.93E-71 dispersed
Bhi08g00311 Bhi-Chr8:12151894 Bhi10g00845 Bhi-Chr10:17099147 1.86E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1633 PF03195 LOB 9.40E-39 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00311 - - csv:101222021 308.916