Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00526 ATTTGCTTACCAAACTTCCCACTTCCCCATTTCGTTTCTGTTCTCAAATTCTTCGAACCTTCTCAAATAGGGGGCGAAGGGGTTTAAGGGGAGGAGAGGAAGGGGCTCTCGGCTCTCTCTTTTCCATATTTTTCCTCTGCCCATAATTTTTCTGAACAAGCGAAAGGAGGGAAAACTGTTGTTTCTTATTCCTTTTCCATTTTTGGGTATGGTGGTTGAGACTAGAGTGTTGACATGGAGGAGGGGGGTCAAGTCCCTTCAGGCTCTGGCAGCTCATGGTTTTCTTTTGTTCTTCACGCTTTTGCTTGCTCTCAAGCTTGACCGTATCGTTTCATACTCTTGGTGGGTTGTCTTTTCACCTCTATGGCTCTTTCATCTAGTTGCAGCAAGAGGAAGATTTTCTCTACCTGCTCCATCAATGCCTCATGATCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCATTTGAAGTACTTCTTTGTATATATTTAGAATGCAGTAAAGTTGTAAATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGCTAGCAATTTTGGTTGATAATATCAGGATGTGTAGAGCTTTACTGCCTGGAGATGAAGACGACAATGTAAGCGATGAAGTTATATGGCAAACACTTCCTCACTTCTGGGTCTCAATATCCATGGTTTTCTTCATTGCTGCAACCCTATTCACGCTTCTAAAGCTTTGTGGCAGTGTAGCCACTCTGGGCTGGTGGGATTTATTTATAAATTTCTGTATAGCTGAGTGCTTTGGATTTCTTGTTTCCACGAAGTGGTATAATCCTATGATTCATAGGCACTCTCTCGTTACAGAATCAAGTTCCTCTTCGCTGACTATTAGATACCTTGACTGGGATAGAGGTGTGGTGGTTTCCTCTGATGGGGTTCAACCTCAAGTCAGAGTTTGTAACCTGCAGGACATCGGTGGACACATCATGAAGGTTCCTTTTATCATTTTCCAAATCCTGCTTTTTATGCACTTAGAGGGAACCCCAAGGAGTGCTTCATATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTACTGCAAGGACTGGGTTTCGTGTTTGCGGCGTATAGGTCAATGGAAAAAATTGTAATATTACTAGTTGGTGCTCCTACTTCTGTAAGATATCTTGACCTAAGGTCAAAGGCTCGTGAACTTTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATCGATGAAGGTAGTCAAGAGGAGCAAGCTAGACTTTATTCAGCTGGGACTTCTGGGTATGATACTTTCACACCAGAGTCTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGGAAAAGATTCTTTGTAGAGTGTGCTTTGATGAACCCATTGATATGGTTCTTCTTCCTTGTAGGCATCACATTCTCTGCAGCTCTTGTTGTGAGAAATGTAATCGCTGCCCCATCTGTCGGGAATCGATAGAAGAAAGGCTGCCTGTTAATGATGTTTAGAACAGAACACAAGCCCTCATATTTGTCGGGCTTGCGATATTTTTAGATGGGACAAGCATCAACAGTGTCTGACATGGTGTGTAAACAATCTGATTAGTTTGAAAGTCATCGAGTGTGTTCATTTTGATATGTAGATGCTTTTGATTGTAATGGAGAGTCGATCATCTTTTCAACCCATTGTGCCATAGAAAGTTCACTCAAATTTGTAAATTTGTGAAACTCATATAATAGTATTTATGCGATGATATTGATGATTAACCAAGTCAACTATGTAATACCTTGACATTTTGTGAAAAATTACCAATAGTGATAATACTTTAACTATC 1857 41.03 MVVETRVLTWRRGVKSLQALAAHGFLLFFTLLLALKLDRIVSYSWWVVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSKVVNLKIVFVPLMIFELAILVDNIRMCRALLPGDEDDNVSDEVIWQTLPHFWVSISMVFFIAATLFTLLKLCGSVATLGWWDLFINFCIAECFGFLVSTKWYNPMIHRHSLVTESSSSSLTIRYLDWDRGVVVSSDGVQPQVRVCNLQDIGGHIMKVPFIIFQILLFMHLEGTPRSASYIPCLVLFSPLFLLQGLGFVFAAYRSMEKIVILLVGAPTSVRYLDLRSKARELLGFMHHGSRLLGWWSIDEGSQEEQARLYSAGTSGYDTFTPESVKKMTKSNLVDEEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17742356 17767542 - XM_039038438.1 Bhi08g00526 40859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00526 440 Pfam Zinc finger, C3HC4 type (RING finger) 391 433 - -
Bhi08g00526 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 375 439 IPR013083 -
Bhi08g00526 440 ProSiteProfiles Zinc finger RING-type profile. 393 428 IPR001841 -
Bhi08g00526 440 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 388 - -
Bhi08g00526 440 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 387 440 - -
Bhi08g00526 440 Pfam Transmembrane Fragile-X-F protein 35 295 IPR019396 -
Bhi08g00526 440 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 388 - -
Bhi08g00526 440 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 387 440 - -
Bhi08g00526 440 SUPERFAMILY RING/U-box 371 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00526 Bhi-Chr8:17742356 Bhi08g00528 Bhi-Chr8:17742356 0 dispersed
Bhi08g00526 Bhi-Chr8:17742356 Bhi08g00527 Bhi-Chr8:17742356 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00526 - - vvi:100249082 625.55