Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00527 GCTTACCAAACTTCCCACTTCCCCATTTCGTTTCTGTTCTCAAATTCTTCGAACCTTCTCAAATAGGGGGCGAAGGGGTTTAAGGGGAGGAGAGGAAGGGGCTCTCGGCTCTCTCTTTTCCATATTTTTCCTCTGCCCATAATTTTTCTGAACAAGCGAAAGGAGGGAAAACTGTTGTTTCTTATTCCTTTTCCATTTTTGGGTATGGTGGTTGAGACTAGAGTGTTGACATGGAGGAGGGGGGTCAAGTCCCTTCAGGCTCTGGCAGCTCATGGTTTTCTTTTGTTCTTCACGCTTTTGCTTGCTCTCAAGCTTGACCGTATCGTTTCATACTCTTGGTGGGTTGTCTTTTCACCTCTATGGCTCTTTCATCTAGTTGCAGCAAGAGGAAGATTTTCTCTACCTGCTCCATCAATGCCTCATGATCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCATTTGAAGTACTTCTTTGTATATATTTAGAATGCAGTAAAGTTGTAAATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGCTAGCAATTTTGGTTGATAATATCAGGATGTGTAGAGCTTTACTGCCTGGAGATGAAGACGACAATCACTTCTGGGTCTCAATATCCATGGTTTTCTTCATTGCTGCAACCCTATTCACGCTTCTAAAGCTTTGTGGCAGTGTAGCCACTCTGGGCTGGTGGGATTTATTTATAAATTTCTGTATAGCTGAGTGCTTTGGATTTCTTGTTTCCACGAAGTGGTATAATCCTATGATTCATAGGCACTCTCTCGTTACAGAATCAAGTTCCTCTTCGCTGACTATTAGATACCTTGACTGGGATAGAGGTGTGGTGGTTTCCTCTGATGGGGTTCAACCTCAAGTCAGAGTTTGTAACCTGCAGGACATCGGTGGACACATCATGAAGGTTCCTTTTATCATTTTCCAAATCCTGCTTTTTATGCACTTAGAGGGAACCCCAAGGAGTGCTTCATATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTACTGCAAGGACTGGGTTTCGTGTTTGCGGCGTATAGGTCAATGGAAAAAATTGTAATATTACTAGTTGGTGCTCCTACTTCTGTAAGATATCTTGACCTAAGGTCAAAGGCTCGTGAACTTTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATCGATGAAGGTAGTCAAGAGGAGCAAGCTAGACTTTATTCAGCTGGGACTTCTGGGTATGATACTTTCACACCAGAGTCTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGATATGGAGATTACAAGCCGCATTGAATCAACAGACGGAAGTTACGAAATTGAGCCGGCAGGAACATGAAAAACTTCTAAATGAAAAGATTCTTTGTAGAGTGTGCTTTGATGAACCCATTGATATGGTTCTTCTTCCTTGTAGGCATCACATTCTCTGCAGCTCTTGTTGTGAGAAATGTAATCGCTGCCCCATCTGTCGGGAATCGATAGAAGAAAGGCTGCCTGTTAATGATGTTTAGAACAGAACACAAGCCCTCATATTTGTCGGGCTTGCGATATTTTTAGATGGGACAAGCATCAACAGTGTCTGACATGGTGTGTAAACAATCTGATTAGTTTGAAAGTCATCGAGTGTGTTCATTTTGATATGTAGATGCTTTTGATTGTAATGGAGAGTCGATCATCTTTTCAACCCATTGTGCCATAGAAAGTTCACTCAAATTTGTAAATTTGTGAAACTCATATAATAGTATTTATGCGATGATATTGATGATTAACCAAGTCAACTATGTAATACCTTGACATTTTGTGAAAAATTACCAATAGTGATAATACTTTAACTATC 1901 41.08 MVVETRVLTWRRGVKSLQALAAHGFLLFFTLLLALKLDRIVSYSWWVVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSKVVNLKIVFVPLMIFELAILVDNIRMCRALLPGDEDDNHFWVSISMVFFIAATLFTLLKLCGSVATLGWWDLFINFCIAECFGFLVSTKWYNPMIHRHSLVTESSSSSLTIRYLDWDRGVVVSSDGVQPQVRVCNLQDIGGHIMKVPFIIFQILLFMHLEGTPRSASYIPCLVLFSPLFLLQGLGFVFAAYRSMEKIVILLVGAPTSVRYLDLRSKARELLGFMHHGSRLLGWWSIDEGSQEEQARLYSAGTSGYDTFTPESVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17742356 17767538 - XM_039038437.1 Bhi08g00527 40860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00527 456 Pfam Transmembrane Fragile-X-F protein 35 284 IPR019396 -
Bhi08g00527 456 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 456 - -
Bhi08g00527 456 ProSiteProfiles Zinc finger RING-type profile. 409 444 IPR001841 -
Bhi08g00527 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 383 453 IPR013083 -
Bhi08g00527 456 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 456 - -
Bhi08g00527 456 Pfam Zinc finger, C3HC4 type (RING finger) 407 449 - -
Bhi08g00527 456 SUPERFAMILY RING/U-box 400 450 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00527 Bhi-Chr8:17742356 Bhi10g01955 Bhi-Chr10:48693842 1.19E-10 dispersed
Bhi08g00526 Bhi-Chr8:17742356 Bhi08g00527 Bhi-Chr8:17742356 0 tandem
Bhi08g00527 Bhi-Chr8:17742356 Bhi08g00528 Bhi-Chr8:17742356 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00527 - - vvi:100249082 652.899