Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00528 GCTTACCAAACTTCCCACTTCCCCATTTCGTTTCTGTTCTCAAATTCTTCGAACCTTCTCAAATAGGGGGCGAAGGGGTTTAAGGGGAGGAGAGGAAGGGGCTCTCGGCTCTCTCTTTTCCATATTTTTCCTCTGCCCATAATTTTTCTGAACAAGCGAAAGGAGGGAAAACTGTTGTTTCTTATTCCTTTTCCATTTTTGGGTATGGTGGTTGAGACTAGAGTGTTGACATGGAGGAGGGGGGTCAAGTCCCTTCAGGCTCTGGCAGCTCATGGTTTTCTTTTGTTCTTCACGCTTTTGCTTGCTCTCAAGCTTGACCGTATCGTTTCATACTCTTGGTGGGTTGTCTTTTCACCTCTATGGCTCTTTCATCTAGTTGCAGCAAGAGGAAGATTTTCTCTACCTGCTCCATCAATGCCTCATGATCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCATTTGAAGTACTTCTTTGTATATATTTAGAATGCAGTAAAGTTGTAAATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGCTAGCAATTTTGGTTGATAATATCAGGATGTGTAGAGCTTTACTGCCTGGAGATGAAGACGACAATGTAAGCGATGAAGTTATATGGCAAACACTTCCTCACTTCTGGGTCTCAATATCCATGGTTTTCTTCATTGCTGCAACCCTATTCACGCTTCTAAAGCTTTGTGGCAGTGTAGCCACTCTGGGCTGGTGGGATTTATTTATAAATTTCTGTATAGCTGAGTGCTTTGGATTTCTTGTTTCCACGAAGTGGTATAATCCTATGATTCATAGGCACTCTCTCGTTACAGAATCAAGTTCCTCTTCGCTGACTATTAGATACCTTGACTGGGATAGAGGTGTGGTGGTTTCCTCTGATGGGGTTCAACCTCAAGTCAGAGTTTGTAACCTGCAGGACATCGGTGGACACATCATGAAGGTTCCTTTTATCATTTTCCAAATCCTGCTTTTTATGCACTTAGAGGGAACCCCAAGGAGTGCTTCATATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTCTTACTGCAAGGACTGGGTTTCGTGTTTGCGGCGTATAGGTCAATGGAAAAAATTGTAATATTACTAGTTGGTGCTCCTACTTCTGTAAGATATCTTGACCTAAGGTCAAAGGCTCGTGAACTTTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATCGATGAAGGTAGTCAAGAGGAGCAAGCTAGACTTTATTCAGCTGGGACTTCTGGGTATGATACTTTCACACCAGAGTCTGTAAAGAAAATGACCAAATCCAATCTCGTTGATGAGATATGGAGATTACAAGCCGCATTGAATCAACAGACGGAAGTTACGAAATTGAGCCGGCAGGAACATGAAAAACTTCTAAATGAAAAGATTCTTTGTAGAGTGTGCTTTGATGAACCCATTGATATGGTTCTTCTTCCTTGTAGGCATCACATTCTCTGCAGCTCTTGTTGTGAGAAATGTAATCGCTGCCCCATCTGTCGGGAATCGATAGAAGAAAGGCTGCCTGTTAATGATGTTTAGAACAGAACACAAGCCCTCATATTTGTCGGGCTTGCGATATTTTTAGATGGGACAAGCATCAACAGTGTCTGACATGGTGTGTAAACAATCTGATTAGTTTGAAAGTCATCGAGTGTGTTCATTTTGATATGTAGATGCTTTTGATTGTAATGGAGAGTCGATCATCTTTTCAACCCATTGTGCCATAGAAAGTTCACTCAAATTTGTAAATTTGTGAAACTCATATAATAGTATTTATGCGATGATATTGATGATTAACCAAGTCAACTATGTAATACCTTGACATTTTGTGAAAAATTACCAATAGTGATAATACTTTAACTATC 1934 41.05 MVVETRVLTWRRGVKSLQALAAHGFLLFFTLLLALKLDRIVSYSWWVVFSPLWLFHLVAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSKVVNLKIVFVPLMIFELAILVDNIRMCRALLPGDEDDNVSDEVIWQTLPHFWVSISMVFFIAATLFTLLKLCGSVATLGWWDLFINFCIAECFGFLVSTKWYNPMIHRHSLVTESSSSSLTIRYLDWDRGVVVSSDGVQPQVRVCNLQDIGGHIMKVPFIIFQILLFMHLEGTPRSASYIPCLVLFSPLFLLQGLGFVFAAYRSMEKIVILLVGAPTSVRYLDLRSKARELLGFMHHGSRLLGWWSIDEGSQEEQARLYSAGTSGYDTFTPESVKKMTKSNLVDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEPIDMVLLPCRHHILCSSCCEKCNRCPICRESIEERLPVNDV 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17742356 17767538 - XM_039038436.1 Bhi08g00528 40861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00528 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 394 464 IPR013083 -
Bhi08g00528 467 ProSiteProfiles Zinc finger RING-type profile. 420 455 IPR001841 -
Bhi08g00528 467 Pfam Zinc finger, C3HC4 type (RING finger) 418 460 - -
Bhi08g00528 467 Pfam Transmembrane Fragile-X-F protein 35 295 IPR019396 -
Bhi08g00528 467 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 467 - -
Bhi08g00528 467 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 4 467 - -
Bhi08g00528 467 SUPERFAMILY RING/U-box 411 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03509 Bhi-Chr1:88566411 Bhi08g00528 Bhi-Chr8:17742356 0 dispersed
Bhi08g00526 Bhi-Chr8:17742356 Bhi08g00528 Bhi-Chr8:17742356 0 dispersed
Bhi08g00528 Bhi-Chr8:17742356 Bhi10g01955 Bhi-Chr10:48693842 1.06E-10 dispersed
Bhi08g00527 Bhi-Chr8:17742356 Bhi08g00528 Bhi-Chr8:17742356 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00528 - - vvi:100249082 678.707