Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00529 AAGAAGGAAGAAAAAGAAACCCAAAAGTAGAAATCCAACACAAACCCAAACAAACACAAACCCTATCCGATTCTCTCCATCCACAAGGCAACCTCTTAGCTTAGAGTGCTGGATATTACATTATGAAGGAGGAAGGAGAGTGTTTTGAAGAGCAGATTCTAATGCAACAATTCCAAATGATGCAACAAAACGGCGACCTTTTTGGAGGAGGCCTGATCTTTAATCCTGAAGTTTCTCCCTTGATGTTTCCCGGCCATCAAGTCCACGCCTTCAACCCCTTTTCTAATCCGACGATCCTAGACCACCACGACTCCTTTATCTTGCCGCCGCCACCACCAACTTCCTACGGCAGCTTCTTCAACAGAAGAAATGCTTCATCTTTGCACTTCCCTCATTATGATAATGTGGGTTGTGCCCCATTTGAGCTGTCCAAGATGACCGCTCAAGAAATAATGGACGCTAAAGCACTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTGCTCCCAAACACCACTAAAACGGACAAGGCATCATTGCTAGCGGAAGTAATCCAACACGTGAAGGAGCTGAAACGACAGACGACGTTGATAGCGGATGTAAGTCTACTGCCAACCGAGCTCGATGAGCTGTCGGTGGACGTCGATGCATCGGACGAGGATGGGAAGTTTGTGATCAAAGCCTCGTTTTGTTGCGAGGATAGGTCTGATCTTTTGCCACAAATAATCAAAACCCTAAAATCCCTCCACCTGAGAACTTTAAAAGCCGAGATCACGACGCTTGGCGGCCGCGTAAGGAACGTATTGTTCATCACGGGCGACGACGACTCCTCCAACGACGAACAAGATCAGCCTCAGCAACAACACCAATACAGCATCAGTTCCATTCAAGAAGCCCTAAAGAGCGTGATGGAGAAGGTTTGTAGTGAAGACCACACGTCTTCAGGCAGCATTAAAAGACAAAGGACCAACAATCACAACAACATCAATATCATCCAACACAGGTCTTTTTAGCTACGTTATTTATCATTGTTTATATATTATGTTAATTAATTAAAAACAATATTATCATCTTTGTTTTGGTGTGGCTTTCGTATGTACAATTATTATGTGTACTAGAGAGCAGTGATGAAAGGGAAGCTTTTTCGTGGGAGAGATAAACCTAATATGAGACCAAACATAGAAATTTTTGTTTCAAGTTTTGAAGTGATATTTGTATTATTGGTTACAGAAGGATCTTAACTCCAATTTGCAAACTGGTGTTTGGGTTTGTTTTGTAGCCAAGTAGATATGGCTGGCACAGAGCTGATGCTATATATATATATATTTTAGTTTCCCTTA 1388 42.29 MKEEGECFEEQILMQQFQMMQQNGDLFGGGLIFNPEVSPLMFPGHQVHAFNPFSNPTILDHHDSFILPPPPPTSYGSFFNRRNASSLHFPHYDNVGCAPFELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTTLIADVSLLPTELDELSVDVDASDEDGKFVIKASFCCEDRSDLLPQIIKTLKSLHLRTLKAEITTLGGRVRNVLFITGDDDSSNDEQDQPQQQHQYSISSIQEALKSVMEKVCSEDHTSSGSIKRQRTNNHNNINIIQHRSF 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17959657 17961146 - XM_039038903.1 Bhi08g00529 40862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00529 312 CDD bHLH_AtAIG1_like 112 191 - -
Bhi08g00529 312 PANTHER TRANSCRIPTION FACTOR BHLH30 54 304 - -
Bhi08g00529 312 Gene3D - 112 172 IPR036638 GO:0046983
Bhi08g00529 312 Pfam Helix-loop-helix DNA-binding domain 120 166 IPR011598 GO:0046983
Bhi08g00529 312 PANTHER TRANSCRIPTION FACTOR BHLH30 54 304 IPR045847 GO:0003700|GO:0006355
Bhi08g00529 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 171 IPR036638 GO:0046983
Bhi08g00529 312 MobiDBLite consensus disorder prediction 293 312 - -
Bhi08g00529 312 MobiDBLite consensus disorder prediction 286 312 - -
Bhi08g00529 312 SMART finulus 123 172 IPR011598 GO:0046983
Bhi08g00529 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00930 Bhi-Chr4:23717034 Bhi08g00529 Bhi-Chr8:17959657 1.20E-25 dispersed
Bhi07g01374 Bhi-Chr7:41419413 Bhi08g00529 Bhi-Chr8:17959657 1.17E-92 dispersed
Bhi08g00529 Bhi-Chr8:17959657 Bhi11g01567 Bhi-Chr11:45300299 1.01E-54 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1648 PF00010 HLH 2.00E-12 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00529 - - rcu:8269511 326.25