Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00560 AACGATCAAAACGATTCAATTTTTTTCTTATTATTATAAATTCTTCTTTTTTTCCTATTCAAATCAACGACGAATCGTTCAGGGCAACAAAAAGTTGCCCTTTCTTACCAAATCTGTAAATCCTTTGAGATTTTATACCTTTTGGATCAAACCCAGAATTTTTTTTCCCATTTCGATCGCATTAAAACCCTAGATTTCTTCCTAGGAATTTGATTCGTTAGGTTTTCTATATATATTAGATAGATTGAGGAAATGGGGGAGGAGGAAGTGCTTATTTTGAAAACAGAAAATTGGGATGAAGTTATGATGCCAATAGTTCCTAAGAAGAGGAATGTTTCTATTCCCATTATTCCCAATTCCCCAGAAGTAAAATGTTGCAGTTCTGGTTGTGCTTTTTCCAGATTGGAACATTGTAATTTGGAGTCATTAAAACGTTCTAAATCAGCTATGAAGCTTGGTGGTTTGATATTGTTTTATACCATAGCTATAGTAGTAGAGATTATTGGTGGTTTGAGAGCTAATAGTCTTGCTGTAATGACCGATGCAGTTCACTTGCTCAGTGATGTTGCTGGTTTCGCTGCTTCCCTCTTTGCAGTTTGGGTTTCGGGTTGGGAGGCAACACCGCAACACTCGTTCGGGTATAACCGTCTTGAAGTTTTAGGTGCCCTTGTGTCTGTACAGCTTATATGGCTGATTTCGGGGGTCTTAATCTACCAGGCAATCAACCGGATTCTTGGCCAAAAGACCAAGGTGGATGGTTTTCTCATGTTTGCCATTGCAGCTTTTGGATTCATTCTTAACTTGTTTATGGTTATATGGCTTGGCCATAGCCACGACTCTCATTCATCTCATTGTTGTCATCATGATCATCATTCTCACTCTCATCAACATCACTTGGATCATGAATCTGATCATGAGAATGAGGAGATTTACACATTAACCAAACAAGAAGGTGGTTCTTTGGCTTCACAGGGCAATAGTTCAACCTTGGACATAAATATCCAAGGTGCTTATCTTCATGTCATTACTGATATGATTCAATCTATCGGTGTGATGATTGCTGGAGTTATTCTATGGTTTAAACCCGACTGGATCGTTGTTGATTTAATCTGCACTCTTGTATTTTCTGTTCTTTCTTTAGCTACTACTTTCTCTATGCTTAGACATACAGCTGGTATATTGATGGAAGGAACACCTAAGGAGGTCAATATTGAGATCCTAGAAAATGACCTCAAGAACATAAAAGGGGTCCATGATTTGCATGACTTACACATTTGGTCCATAACGGTCGGAAAAGTCGTTTTGTCGTGCCATGTTGTTGCCGAACCCGGAGTTTGTACTAGGGAGCTAATTTTGAAGATTAGAAACCTTTGCGAAAAGAGATACAATATAGTTCATACCACCATACAAGTTGAGTAGGAGAATGGGGAAGTGAAAGCAATGGAAAGGGAATGTGATAAATTGTACTTGTTGCCTTCAGTTAGTATTATTGAATTATCATTCACATGGCATACATCTACTCTTCTTTGAGTTCAACAATATATGAGATGGAAAACTCGAATCTTTGATCT 1571 37.94 MGEEEVLILKTENWDEVMMPIVPKKRNVSIPIIPNSPEVKCCSSGCAFSRLEHCNLESLKRSKSAMKLGGLILFYTIAIVVEIIGGLRANSLAVMTDAVHLLSDVAGFAASLFAVWVSGWEATPQHSFGYNRLEVLGALVSVQLIWLISGVLIYQAINRILGQKTKVDGFLMFAIAAFGFILNLFMVIWLGHSHDSHSSHCCHHDHHSHSHQHHLDHESDHENEEIYTLTKQEGGSLASQGNSSTLDINIQGAYLHVITDMIQSIGVMIAGVILWFKPDWIVVDLICTLVFSVLSLATTFSMLRHTAGILMEGTPKEVNIEILENDLKNIKGVHDLHDLHIWSITVGKVVLSCHVVAEPGVCTRELILKIRNLCEKRYNIVHTTIQVE 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18835548 18837508 - XM_039037959.1 Bhi08g00560 40893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00560 388 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 317 388 IPR036837 -
Bhi08g00560 388 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 5 388 - -
Bhi08g00560 388 SUPERFAMILY Cation efflux protein transmembrane domain-like 69 312 IPR027469 -
Bhi08g00560 388 PANTHER METAL TOLERANCE PROTEIN B 5 388 - -
Bhi08g00560 388 TIGRFAM CDF: cation diffusion facilitator family transporter 72 388 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bhi08g00560 388 Pfam Cation efflux family 72 311 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bhi08g00560 388 Gene3D Cation efflux protein transmembrane domain 68 310 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00560 Bhi-Chr8:18835548 Bhi12g02512 Bhi-Chr12:78750490 1.42E-97 dispersed
Bhi08g00560 Bhi-Chr8:18835548 Bhi08g00561 Bhi-Chr8:18835548 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00560 K14689 - csv:101215692 609.372