Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00562 TTTAACCTTCCTTTTAAATCACCCCCTTCCGCCGGACCACTCTTCTCTTTCATCTGCTATCGTTCTCGAATTCCGATTAATTCCGGTCGCCGTCGTCAACGTTGTCATCGTCTCCGGCTTGTTTCGAAAATTGAAGTAATCAACTACGGCTGGGGAAAGGGGGAGGGGAGATTAGAGGTAATGGCGGAGATTTGTTGTAAAGTGATGAGTGAGAGTGAGGCGTCGTCGTCCTGTGAGCCGAGTTCGCGAGTGGCTAGACGTCGGAGAATGGAGATCAGGAGGTGTAAATTTGTCGCTGGGGTTGCTCCGTCGGAGACGGAGACTGTTGCGAAACGGCAGAAGCTGGAGGATCGAGCTACGTCGATTTCCAGAGACTGTGATAACGCTGTTCAGAATTGTGATTCCGGAGAAGAAGAAACCGTCGGGAGATTTGTGGCCGGCGGAGAGGTTTCGACTAAGGAGGTATCGACTCCTCTATCTCGGGAATCTCCTTGTGGCGAAGTGATTCCGAAGTTTGGATTCTCTTCTGTTTGTGGAAGGCGGAGAGATATGGAGGATGCGGTGGCGGTTCATCCATCGCTTTGTTTGACGGAGAAGAAAGCCAACGATATGTTGCACTTCTTTGGTGTTTACGATGGCCATGGCTGCTCTCATGTGGCGATGAGGTGTAAGGAGCGGCTGCATGAACTGGTAAAAGATGAGTTGGATAGGGAGGAGAAAGATGACGCCGCCATTGTGGCGGAGGCGGAGGCGTCGCGGTGGGACCGCGCTATGAAGAGAATCTTCTGGCGAATGGACAACGAAGTTGTGGCGCGAAACAATGAAGAAGTTGTTGCGAACTGTAGATGCGAACTTCAGTCGCCGGATTGCGATGCCGTCGGATCTACCGCCGTCGTAGCAATTGTGACGCCGGATAAGATCATCGTCGCCAACTGCGGCGACTCCAGAGCCGTTCTCTGCCGTAACGGAAAAGCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCCGACGAACTTAGCCGGATCGAGGAAGCCGGTGGACGAGTGATTTACTGGGACGGACCAAGAGTTCTCGGAGTTCTCGCCATGTCAAGAGCCATAGGCGATAATTATCTGAAACCGTATGTGATATCGGAGCCAGAGGTTACGATAACGAATCGGACGGCAGAGGATGAGTGCTTGATTCTAGCGAGCGACGGACTGTGGGATGTGGTGCCGAACGAGACGGCTTGTGGAGTGGCGAGCATGTGCCTACGTGGGAAGGCGGAGGAGAGATCGCCGGTGTGGCCGTCGGGTGAGGCGGAGACGGCGGCGGAAGGGGAGGAGAGAGGAAGCGCAGACAAGGCCTGCAACGATGCGTCGATGCTGCTGACCAAGCTGGCGTTGGCCCGGCACAGTACGGACAACGTGAGCGTCGTGGTGGTGGACCTTAAGGGGGACACGTGTCCTTAGAATCTGTCTCCTTTTTTTTCCTCCTTTTCCTAATTTAGTACAAAGAATTTAATTTGAAATTTTAGAATTAAAGAGTTTTCTTTCTAGAAATTAGGAAGGGAAAATGGAGGTTTTTTCCTAAAAAAAATTTACTTTTTAGCGAGGTGAAGAATGAAGATAATTTCTCCTCTCGAGGATCTTCTTCTTTTTGGAGAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACAAAGAAAAGAAAAGTGTAATTAACAAGTATCAATATCGATGTCAATGCATTTCCATGGATTTGTCAAATTTTCTTTCTGTTCTCAATCAAATTTTCTTTGAAATTATATTAATATTATCCTCATATAAGTA 1818 48.9 MAEICCKVMSESEASSSCEPSSRVARRRRMEIRRCKFVAGVAPSETETVAKRQKLEDRATSISRDCDNAVQNCDSGEEETVGRFVAGGEVSTKEVSTPLSRESPCGEVIPKFGFSSVCGRRRDMEDAVAVHPSLCLTEKKANDMLHFFGVYDGHGCSHVAMRCKERLHELVKDELDREEKDDAAIVAEAEASRWDRAMKRIFWRMDNEVVARNNEEVVANCRCELQSPDCDAVGSTAVVAIVTPDKIIVANCGDSRAVLCRNGKAIPLSSDHKPDRPDELSRIEEAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTITNRTAEDECLILASDGLWDVVPNETACGVASMCLRGKAEERSPVWPSGEAETAAEGEERGSADKACNDASMLLTKLALARHSTDNVSVVVVDLKGDTCP 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18887721 18889892 + XM_039039128.1 Bhi08g00562 40895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00562 424 ProSitePatterns PPM-type phosphatase domain signature. 147 155 IPR000222 GO:0043169
Bhi08g00562 424 Pfam Protein phosphatase 2C 111 374 IPR001932 -
Bhi08g00562 424 MobiDBLite consensus disorder prediction 366 388 - -
Bhi08g00562 424 PANTHER PROTEIN PHOSPHATASE 2C 37 44 420 - -
Bhi08g00562 424 PANTHER ALPHABET, ISOFORM E-RELATED 44 420 - -
Bhi08g00562 424 Coils Coil 52 72 - -
Bhi08g00562 424 SUPERFAMILY PP2C-like 107 419 IPR036457 -
Bhi08g00562 424 CDD PP2Cc 111 418 IPR001932 -
Bhi08g00562 424 Gene3D - 100 422 IPR036457 -
Bhi08g00562 424 SMART PP2C_4 101 416 IPR001932 -
Bhi08g00562 424 Coils Coil 161 181 - -
Bhi08g00562 424 ProSiteProfiles PPM-type phosphatase domain profile. 111 418 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01397 Bhi-Chr1:28617181 Bhi08g00562 Bhi-Chr8:18887721 3.02E-60 dispersed
Bhi01g01398 Bhi-Chr1:28617192 Bhi08g00562 Bhi-Chr8:18887721 3.02E-60 dispersed
Bhi01g01472 Bhi-Chr1:30292843 Bhi08g00562 Bhi-Chr8:18887721 9.68E-81 dispersed
Bhi04g02376 Bhi-Chr4:64913842 Bhi08g00562 Bhi-Chr8:18887721 4.66E-113 dispersed
Bhi08g00562 Bhi-Chr8:18887721 Bhi04g01479 Bhi-Chr4:36821451 7.40E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00562 K14497 - csv:101206871 756.133