Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00587 ATGTCAGTTTTTTTCCGTAAAAGAATTTCCTTAAAAAAAATTGTATGGCGAAATCAAGAGAAGGGCTTCCTAGAACCATCGTTGCCGTCAGAAATGGCCCGACACTTGGCCTTCTGACTCTTAAATACCCTAAAATATTCCCAATCCGTGTTCATATTTCCACATTTCCACCGATTCTCTTCACATTTTCTTCAAAAAAATTTCTGGGTCTTTCATTTCTCATCTCACTCTTCCAACCCTTTCACTTTTATGGATAATCTCCTCGATGATTTTCCCAATTCTTGGAATAATTATCCCTTCCATCCCCATCTCTCTAATGGCTTGTTCAAAGTCAATCGCGATTCCGTTGATGCCCTTCAAATTCCGGCCAAGTCACAGCAACATCAACACCATCTCAGTAATAATTCCTCCTCCTCGCCGTCGTCGTCTAGCTCCGAAGGCGACTCGCCGGACAGCCATGACACCTCCAATACCATGCTCAAATACATCACTGAGATGTTGATGGACGAAGGAGAAGATCTCAAAGCACAGCCCTGTATGCTTCTCGACTGTTTGGCTCTTCAAGCTGCTGAGAAATCTTTTTATGATGTTCTTGGCCAGAAATATCCCCCTTCTCCAATCGGAAATGGTGATTCTTCTCAGGATTTTAGCTGTGATAGGGCTGTAAGTAACAACGGTGAGGATGAATCTGAATCTTTTAATGGTAACTCCTCTGTTTTTGCCCCTTTTCAAAACTCTGTTTTGAGTCGAGATTCGTTTCTTGGGATGCAATTTATTGGTCATTTTAGGCAAGGAGCTGAAGAGGCTAGCAAGTTTCTTCCTGTTAATGGAAGATTTGGGACCATTGACTTGGATAATGATTCTTATAGTTCTACCTCTGTTCCTTCTAGGGCTGTTGATTTTTCTTGGTTTGGTGCTGAGAGTGATGGTAGATCCGTCCTTGAAAATGGGTTGTTAAGAGAGAAAAAAAACCGTTTGAGGGAGGATAGTGATGAGGAGTTGAGAAGTAATAAGCAGTCTGCTAATTTTGCTGATGATAATTCACTGTCTGAGTTGTTTGATGAGGTTCTTCTTTGTCGGGGCGAAAGTCGGCAGTCTCCCCCATCGTGTGGTTCCGATGAATCGTCGGAGAGCGAAGCGAATAAGAAGTCGAGAGGGAGAGGGAAAAGGAAAGGGAAGAAGAGTACTCGTTCTAGGAAGCAAGAGAATAGTGTGGAAGTTGTGGATTTGTGGACATTGTTGACTCAATGTGCTCAAGCTGTTTCAAATTATGATCAAAGGACTGCAAATGAGTTGCTAAATCAGATTAGGCAGCATTCTAATTCATCTGGGGATGGAAATCAGAGATTAGCTCATTACTTTGCTAAGGGTCTCGAGACTCGTCTTGCCGCCGGGACGCCTCTGTATTTGCCCTTTGCAAGTAATGAAACCTCTGCTGCTGAGATCTTGAAAGCTTATCAGACGTTCATCAAGGCGTGCCCGTTTCGGCGGATGTCGTATTTCTATGCCAATAGAACGATTCTTAAGCTAGCTGAGAAAGTAACAACTTTGCATATTGTTGATTTTGGTATTTTGTATGGTCTCCAATGGCCTTGCTTGATTCAACGGCTCTCGCGCAGACCTGGTGGGCCTCCCAAGCTTCGGATCACGGGGATCGAGCTTCCTCAGCCTGGATTCCGCCCTGCTGAACGTGTTGAGCAGACTGGTCGGCGTCTTGCACATTACTGCAAGAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCCCGGAAATGGGAAACGGTTCGATACGAGGATCTCAATCTTGACAGAGATGAACTGACTATTGTGACTTGTATGTTCCGAATGAAGAACGTACCCGACGAAACGGTGGTCGCAAACAGCCCAAGAGACAGGGTTCTGAAGTTGATCAGGAAAATCAATCCAGATCTCTTCATTCATGAAGTCACCAATGGGTCATTCAACACTCCCTTCTTCAACACAAGGTTTAAAGAGGCACTCTTTTACTACTCATCGTTGTTCGACATGTACGAGGCGACAGTGCCTCGAAACAATCCAATGAGGCATCTGTGTGAGAAGGAAATCCTAGGAAGAGACATCATGAATGTCATAGCGTGCGAGGGGCTTGAGAGAGTTGAAAGGCCAGAGACTTACAAGCAATGGCAAGTAAGGAACACAAGGGCCGGGTTCAAACAAGTACCATTAGACCAAGACCTACTGAAGAGTGTGGAGAAGATAGTAAACACAGAATACCATCAGGACTTTGTGATCGATCAGGACGGGTCGTGGATGTTGCAAGGGTGGAAGGGACGGATCATCGACGCGTTATCGTGTTGGGTAGTTGCCTAAAAAGGCCAAGGAAGCTATTAGAAGACTTAGAAGTCTTGTAATATTTATCCATTTTGATAATCCTTTAAGTTTTGTGTCTGCTAGTTTATGTATGTAGCTTGATTGTTGGAATTTTGTACATAAATTTGGAAAATCACCTATAAAAAAAAACAAGAAATCTATTTCTTACAAAAA 2523 43.48 MDNLLDDFPNSWNNYPFHPHLSNGLFKVNRDSVDALQIPAKSQQHQHHLSNNSSSSPSSSSSEGDSPDSHDTSNTMLKYITEMLMDEGEDLKAQPCMLLDCLALQAAEKSFYDVLGQKYPPSPIGNGDSSQDFSCDRAVSNNGEDESESFNGNSSVFAPFQNSVLSRDSFLGMQFIGHFRQGAEEASKFLPVNGRFGTIDLDNDSYSSTSVPSRAVDFSWFGAESDGRSVLENGLLREKKNRLREDSDEELRSNKQSANFADDNSLSELFDEVLLCRGESRQSPPSCGSDESSESEANKKSRGRGKRKGKKSTRSRKQENSVEVVDLWTLLTQCAQAVSNYDQRTANELLNQIRQHSNSSGDGNQRLAHYFAKGLETRLAAGTPLYLPFASNETSAAEILKAYQTFIKACPFRRMSYFYANRTILKLAEKVTTLHIVDFGILYGLQWPCLIQRLSRRPGGPPKLRITGIELPQPGFRPAERVEQTGRRLAHYCKRFNVPFEHKVLARKWETVRYEDLNLDRDELTIVTCMFRMKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRNNPMRHLCEKEILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKSVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIDALSCWVVA 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19434608 19437130 - XM_039038576.1 Bhi08g00587 40920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00587 699 MobiDBLite consensus disorder prediction 123 153 - -
Bhi08g00587 699 MobiDBLite consensus disorder prediction 39 73 - -
Bhi08g00587 699 ProSiteProfiles GRAS family profile. 318 697 IPR005202 -
Bhi08g00587 699 MobiDBLite consensus disorder prediction 122 153 - -
Bhi08g00587 699 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 697 IPR005202 -
Bhi08g00587 699 Pfam GRAS domain family 329 696 IPR005202 -
Bhi08g00587 699 MobiDBLite consensus disorder prediction 280 318 - -
Bhi08g00587 699 PANTHER SCARECROW-LIKE PROTEIN 30 36 697 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00587 Bhi-Chr8:19434608 Bhi11g02266 Bhi-Chr11:61686851 0 dispersed
Bhi10g00730 Bhi-Chr10:15471292 Bhi08g00587 Bhi-Chr8:19434608 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1651 PF03514 GRAS 2.00E-114 CL0063 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00587 - - bhj:120083055 1359.74