Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00598 TCTTCCCCAAACGCCCACTCCCACTTTCACTTTCCTTTCTCTTTTTCATTCATCAAACCCAAAAAAATGGCTAAAACCGCCATTCTCCTCTGCATTGTATCTCTGATTTCAACAATGTGGCCGGCCGCCGCCAGAATTCCCGGCGTCTACTCCGGTGGCCCATGGGAGAGTGCCCACGCCACGTTCTACGGCGGCTCCGACGCCTCCGGCACAATGGGTGGAGCTTGTGGATATGGGAATTTGTACAGCCAAGGGTACGGAGTGAACACGGCGGCGTTGAGTACGGCGTTGTTCAACAATGGGCTGAGCTGCGGTGCTTGTTTTGAGATTAAATGTGCGAATGATCCGAGATGGTGCCATTCCGGCAGTCCATCGATTGTTATTACGGCCACTAATTTCTGTCCGCCGAACTTTGCTTTGCCCAGTGATAATGGCGGATGGTGTAATCCTCCTCGTCCGCATTTCGATTTGGCTATGCCTATGTTTCTTAAGATAGCCGAGTATCGCGCCGGAATAGTTCCCGTCGCGTACCGCCGAGTGGCGTGCCGGAAGCAAGGGGGGATCCGGTTCACAATCCACGGGTTCAGATACTTCAACTTGGTTTTAATCACCAACGTCGCGGGTGCAGGAGATATCGTGAAGGTGAGCGTGAAAGGCACGCGCACCGGTTGGCTGAGCATGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTGTTGGTGGGCCAGGCCTTGTCTTTTAGAGTCACAGGCAGTGACAGACGGACTTCCACCTCCTTCAACGTGGCGCCCTCTGATTGGCAGTTTGGTCAGACCTTCACCGGCAAGAATTTTAGGGTTTAGAACCCGAATAATTTCGCTGACAGACCAATCAAAATCAGGAGAGAAGTTTGAGATTTGACGTGGCGTCACGTGATTGGATCATTTCAGGGGTAACTGTTTTTGACTGAAGTAAATATTTGATGAGGAAGAAAGAAAAGGGCTGAGGTGGCTGAACAAAAGTGTGGCCCACAGTCCTACATTATAATATCATATTATATTTTATAATATAATGTTTGTTGTTGTTGTTATTATTATTATTATTATTATTATTATTATTAATGTGTTAGCATT 1116 48.39 MAKTAILLCIVSLISTMWPAAARIPGVYSGGPWESAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANDPRWCHSGSPSIVITATNFCPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKQGGIRFTIHGFRYFNLVLITNVAGAGDIVKVSVKGTRTGWLSMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSFNVAPSDWQFGQTFTGKNFRV 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19742027 19744262 + XM_039039793.1 Bhi08g00598 40931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00598 259 Gene3D - 21 161 IPR036908 -
Bhi08g00598 259 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Bhi08g00598 259 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Bhi08g00598 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 165 IPR007112 -
Bhi08g00598 259 PANTHER EXPANSIN 5 258 - -
Bhi08g00598 259 PANTHER EXPANSIN-A15 5 258 IPR002963 GO:0009664
Bhi08g00598 259 SUPERFAMILY Barwin-like endoglucanases 32 183 IPR036908 -
Bhi08g00598 259 Pfam Lytic transglycolase 68 155 IPR009009 -
Bhi08g00598 259 SUPERFAMILY PHL pollen allergen 162 254 IPR036749 -
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Bhi08g00598 259 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Bhi08g00598 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Bhi08g00598 259 Pfam Expansin C-terminal domain 166 243 IPR007117 -
Bhi08g00598 259 Gene3D - 165 257 IPR036749 -
Bhi08g00598 259 SMART dpbb_1 68 155 IPR007112 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi08g00598 Bhi10g00718 CCT
Bhi08g00598 Bhi10g00718 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02000 Bhi-Chr3:42858229 Bhi08g00598 Bhi-Chr8:19742027 1.80E-169 dispersed
Bhi06g00957 Bhi-Chr6:26359497 Bhi08g00598 Bhi-Chr8:19742027 1.97E-168 dispersed
Bhi08g00598 Bhi-Chr8:19742027 Bhi06g00891 Bhi-Chr6:23389068 2.95E-119 dispersed
Bhi12g01201 Bhi-Chr12:35940930 Bhi08g00598 Bhi-Chr8:19742027 1.47E-92 dispersed
Bhi01g02134 Bhi-Chr1:49923685 Bhi08g00598 Bhi-Chr8:19742027 6.26E-97 transposed
Bhi05g01545 Bhi-Chr5:52213478 Bhi08g00598 Bhi-Chr8:19742027 1.67E-91 transposed
Bhi11g00352 Bhi-Chr11:8260932 Bhi08g00598 Bhi-Chr8:19742027 1.32E-95 transposed
Bhi10g00718 Bhi-Chr10:15399062 Bhi08g00598 Bhi-Chr8:19742027 4.04E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00598 - - csv:101206662 533.872