Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00619 TTTTTCTTTCTTTCTTTCTTCTAACTTCTAAGCGCTCTCTCTCTCTCTCTCTTCTTCATCCCTCAGCCGCGCCAGAAACGTAAAAGCAAAATTTCCTTTTCAAAGCTCTGTTTCTCATCATCATCATCATCACAATCATCACATCTCTGTAATGGAGACGTCTCAGACTTCCCATTCCTAGCGTTTCTGCTGAAGCTACTAACAAACAGCTTCAAAATCCGTCTTCTGGTGAGATTTCACCAGATCTTTACCTGTTTTGGTGTTCTGTTTTACGCTTAGATCTGATTTCGAGTGTTTTTCCAGCTATGGAGGAAGATAACGGCGCTCTTATTCGGAGTTTGATTGATGTAGTGAATGAGATTGCTTGGATCTCGGATTTTAGGTATACTGTTAAGAAACAGTATTGTAATTTGTCTAGGAGATTGAAGCTTCTGATTCCAATGTTTGAAGAGATTAGAGATAGTAAAGAGTCGCTCTCTGAGGATACTCTTAAGGCTCTTGTATTGTTGAAAGAAGCTCTTGAATCGGCTAAGAAGTTGCTCAGATTTGGAAGCGAAGGGAGTAAGATTTTCCTGGCCATAGAGAGGGAGCAAATTATGAACAAATTTCACGAGGTAACTGCTCAGTTGGAACAGGCGTTGGAAGGAATAGCCTACGATAAACTTGATATATCCGATGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGAGCCAAAGGCAGGGCCGATGCTCCTGACTTTGAGCTGTCAGATGATATTCTTGCCCTTTACAACACGAGCAATGATTCTTCTATAGATCAAGACCGCCTGAGGAGACTGTCCGAAAAATTACAGTTAATTGGAATATCTGATCTTACACAAGAGTCAATAGCTTTGCATGAGATGGTTTCTGCTACTGATGGAGATCCAGGTCAGAGCATTGAGAAGATGGCAGGGCTGCTAAAGAAAATAAAAGATTTTGTGCAAACGGAGAACCTCGAAACGGACACTCCTAGTAGAGAAAAGAGTCCTCCAGCAAGTTGTAGTGGACAAGTATCCAATGATAAAAATAACAAGGCCCCAATCATACCAGATGATTTTCGCTGCCCCATATCCCTGGAGTTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGACCTATGAACGTTCGTGCATTGAGAAGTGGCTTGAAGCAGGGCATGGGACGTGTCCAAAGACACAACAGAACCTTTCAAGCACTACTCTTACCCCGAATTATGTGTTGCGTAGCCTTATAGCCCAATGGTGCGAGGCTAATGGTATTGAACCGCCAAAACGACCCAGCAGTGCTCGACCATGTAGAAGCTCATCATCTTGCTCACCTGCTGAACGCACAAAGATTGATATTCTTCTTTGCAAACTCGCATCTGGAAATCCTGAAGATCAGCGATCTGCAGCTGGTGAGATCCGACTTCTTGCAAAACGGAACGCAGATAATCGTGTTGCCATTGCTGAGGCTGGTGCAATACCTCTCCTTGTCGGTCTTCTTTCAACTCCAGATTCCCGTGTTCAAGAACATGCTGTGACAGCACTTCTTAACCTCTCTATATGTGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATCGTTCTTGTGCTCAAGAAGGGGAGCATGGAAGCACGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCAGTTGTCGATGAAAATAAAGTTAGAATTGGTGCCTCCGGAGCTATCCCGCCACTCGTTACACTGCTTAGTGAAGGCACACAAAGGGGTAAGAAAGATGCTGCAACTGCACTTTTCAACTTGTGCATCTACCAAGGAAACAAAGGAAAGGCAGTGAGAGCTGGTGTAGTTCCAACCTTAATGCAGCTTCTCACCGAGCCTGGAACCGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTTGCTAGCCATCCCGAAGGGAAAGCTGCCATCGGATCTGCGAAGGCAGTGCCGGTTTTGGTAGATGTTATTGGGACAGGTTCCCCCAGGAACAGAGAGAATGCAGCTGCAGTTCTCGTGCACCTCTGCTCGGGAGACGAGCAACACCTAGTAGAGGCGAGGGAACTTGGAGTGGTTAGTCCATTGATAGATTTGGCACGCAGTGGCACAGATAGAGGAAAGCGAAAAGCTGCACAGTTGCTTGAGCGAATAAACCGACTGTTTGAGCACACAGCGCATACGGAGGTGCTTCGGTTGCAAGCGCCAGAGTCTCAACCTCAAAGCCAGCCATCACAATCGACCTCAACAACGGAAGTCGTTGGTAGCTGAGAGTGGAGTTTGATCTTTGCTTTACACAGCTCCGTTTCTTTTGTTCCTTTTTACATGTAAGAGGCAGCTTTGCTTCACAAGGGGAGGTGGAAGATCACCTGCCTAATCTGTAAGTTATTATCATAATTTATAATTTTATTTTGTATCTTTCTTTTTTGAAGGGAAACCATCTTTGAACAAAAAGGGAAAGAATCTAAAGCCCAATGTATGAATGAATCATTATACATCCTCAAATTTTTTGAGAGGAAAA 2559 44.59 MEEDNGALIRSLIDVVNEIAWISDFRYTVKKQYCNLSRRLKLLIPMFEEIRDSKESLSEDTLKALVLLKEALESAKKLLRFGSEGSKIFLAIEREQIMNKFHEVTAQLEQALEGIAYDKLDISDEVKEQVELVLAQFRRAKGRADAPDFELSDDILALYNTSNDSSIDQDRLRRLSEKLQLIGISDLTQESIALHEMVSATDGDPGQSIEKMAGLLKKIKDFVQTENLETDTPSREKSPPASCSGQVSNDKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSARPCRSSSSCSPAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHPEGKAAIGSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARELGVVSPLIDLARSGTDRGKRKAAQLLERINRLFEHTAHTEVLRLQAPESQPQSQPSQSTSTTEVVGS 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20447784 20453014 + XM_039038548.1 Bhi08g00619 40952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00619 667 Pfam Armadillo/beta-catenin-like repeat 468 506 IPR000225 GO:0005515
Bhi08g00619 667 Pfam Armadillo/beta-catenin-like repeat 385 424 IPR000225 GO:0005515
Bhi08g00619 667 Pfam Armadillo/beta-catenin-like repeat 550 589 IPR000225 GO:0005515
Bhi08g00619 667 SUPERFAMILY ARM repeat 356 629 IPR016024 -
Bhi08g00619 667 CDD RING-Ubox_PUB 262 304 IPR045210 -
Bhi08g00619 667 Gene3D - 343 663 IPR011989 -
Bhi08g00619 667 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Bhi08g00619 667 MobiDBLite consensus disorder prediction 234 253 - -
Bhi08g00619 667 SMART arm_5 549 589 IPR000225 GO:0005515
Bhi08g00619 667 SMART arm_5 508 548 IPR000225 GO:0005515
Bhi08g00619 667 SMART arm_5 426 466 IPR000225 GO:0005515
Bhi08g00619 667 SMART arm_5 467 507 IPR000225 GO:0005515
Bhi08g00619 667 SMART arm_5 385 425 IPR000225 GO:0005515
Bhi08g00619 667 SMART arm_5 591 631 IPR000225 GO:0005515
Bhi08g00619 667 MobiDBLite consensus disorder prediction 227 256 - -
Bhi08g00619 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Bhi08g00619 667 Gene3D - 7 117 IPR036537 GO:0007166
Bhi08g00619 667 SUPERFAMILY RING/U-box 255 334 - -
Bhi08g00619 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 396 438 IPR000225 GO:0005515
Bhi08g00619 667 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 645 - -
Bhi08g00619 667 MobiDBLite consensus disorder prediction 644 667 - -
Bhi08g00619 667 PANTHER U BOX DOMAIN-CONTAINING 7 645 - -
Bhi08g00619 667 Pfam U-box domain 258 328 IPR003613 GO:0004842|GO:0016567
Bhi08g00619 667 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Bhi08g00619 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 331 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00619 Bhi-Chr8:20447784 Bhi10g00688 Bhi-Chr10:15015352 0 dispersed
Bhi09g02989 Bhi-Chr9:77613881 Bhi08g00619 Bhi-Chr8:20447784 1.30E-29 dispersed
Bhi09g02990 Bhi-Chr9:77616566 Bhi08g00619 Bhi-Chr8:20447784 1.30E-29 dispersed
Bhi08g00619 Bhi-Chr8:20447784 Bhi08g00620 Bhi-Chr8:20447784 0 tandem
Bhi01g00550 Bhi-Chr1:9906282 Bhi08g00619 Bhi-Chr8:20447784 8.00E-15 transposed
Bhi02g02047 Bhi-Chr2:55563195 Bhi08g00619 Bhi-Chr8:20447784 5.24E-172 transposed
Bhi03g00520 Bhi-Chr3:10043410 Bhi08g00619 Bhi-Chr8:20447784 1.68E-59 transposed
Bhi03g01223 Bhi-Chr3:25186013 Bhi08g00619 Bhi-Chr8:20447784 4.35E-08 transposed
Bhi03g02213 Bhi-Chr3:48472114 Bhi08g00619 Bhi-Chr8:20447784 4.22E-72 transposed
Bhi04g01222 Bhi-Chr4:29519630 Bhi08g00619 Bhi-Chr8:20447784 1.72E-19 transposed
Bhi04g02290 Bhi-Chr4:62916660 Bhi08g00619 Bhi-Chr8:20447784 6.31E-122 transposed
Bhi05g00048 Bhi-Chr5:1187629 Bhi08g00619 Bhi-Chr8:20447784 3.10E-90 transposed
Bhi07g00339 Bhi-Chr7:14833207 Bhi08g00619 Bhi-Chr8:20447784 7.77E-168 transposed
Bhi07g00814 Bhi-Chr7:28780373 Bhi08g00619 Bhi-Chr8:20447784 0 transposed
Bhi07g01438 Bhi-Chr7:42393080 Bhi08g00619 Bhi-Chr8:20447784 4.64E-17 transposed
Bhi09g02271 Bhi-Chr9:63487452 Bhi08g00619 Bhi-Chr8:20447784 3.04E-16 transposed
Bhi12g00918 Bhi-Chr12:27615901 Bhi08g00619 Bhi-Chr8:20447784 9.64E-06 transposed
Bhi07g01714 Bhi-Chr7:47488452 Bhi08g00619 Bhi-Chr8:20447784 5.93E-75 transposed
Bhi10g00687 Bhi-Chr10:15015036 Bhi08g00619 Bhi-Chr8:20447784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00619 - - csv:101218572 1138.64