Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00620 TTTTTCTTTCTTTCTTTCTTCTAACTTCTAAGCGCTCTCTCTCTCTCTCTCTTCTTCATCCCTCAGCCGCGCCAGAAACGTAAAAGCAAAATTTCCTTTTCAAAGCTCTGTTTCTCATCATCATCATCATCACAATCATCACATCTCTGTAATGGAGACGTCTCAGACTTCCCATTCCTAGCGTTTCTGCTGAAGCTACTAACAAACAGCTTCAAAATCCGTCTTCTGCTATGGAGGAAGATAACGGCGCTCTTATTCGGAGTTTGATTGATGTAGTGAATGAGATTGCTTGGATCTCGGATTTTAGGTATACTGTTAAGAAACAGTATTGTAATTTGTCTAGGAGATTGAAGCTTCTGATTCCAATGTTTGAAGAGATTAGAGATAGTAAAGAGTCGCTCTCTGAGGATACTCTTAAGGCTCTTGTATTGTTGAAAGAAGCTCTTGAATCGGCTAAGAAGTTGCTCAGATTTGGAAGCGAAGGGAGTAAGATTTTCCTGGCCATAGAGAGGGAGCAAATTATGAACAAATTTCACGAGGTAACTGCTCAGTTGGAACAGGCGTTGGAAGGAATAGCCTACGATAAACTTGATATATCCGATGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGAGCCAAAGGCAGGGCCGATGCTCCTGACTTTGAGCTGTCAGATGATATTCTTGCCCTTTACAACACGAGCAATGATTCTTCTATAGATCAAGACCGCCTGAGGAGACTGTCCGAAAAATTACAGTTAATTGGAATATCTGATCTTACACAAGAGTCAATAGCTTTGCATGAGATGGTTTCTGCTACTGATGGAGATCCAGGTCAGAGCATTGAGAAGATGGCAGGGCTGCTAAAGAAAATAAAAGATTTTGTGCAAACGGAGAACCTCGAAACGGACACTCCTAGTAGAGAAAAGAGTCCTCCAGCAAGTTGTAGTGGACAAGTATCCAATGATAAAAATAACAAGGCCCCAATCATACCAGATGATTTTCGCTGCCCCATATCCCTGGAGTTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGACCTATGAACGTTCGTGCATTGAGAAGTGGCTTGAAGCAGGGCATGGGACGTGTCCAAAGACACAACAGAACCTTTCAAGCACTACTCTTACCCCGAATTATGTGTTGCGTAGCCTTATAGCCCAATGGTGCGAGGCTAATGGTATTGAACCGCCAAAACGACCCAGCAGTGCTCGACCATGTAGAAGCTCATCATCTTGCTCACCTGCTGAACGCACAAAGATTGATATTCTTCTTTGCAAACTCGCATCTGGAAATCCTGAAGATCAGCGATCTGCAGCTGGTGAGATCCGACTTCTTGCAAAACGGAACGCAGATAATCGTGTTGCCATTGCTGAGGCTGGTGCAATACCTCTCCTTGTCGGTCTTCTTTCAACTCCAGATTCCCGTGTTCAAGAACATGCTGTGACAGCACTTCTTAACCTCTCTATATGTGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATCGTTCTTGTGCTCAAGAAGGGGAGCATGGAAGCACGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCAGTTGTCGATGAAAATAAAGTTAGAATTGGTGCCTCCGGAGCTATCCCGCCACTCGTTACACTGCTTAGTGAAGGCACACAAAGGGGTAAGAAAGATGCTGCAACTGCACTTTTCAACTTGTGCATCTACCAAGGAAACAAAGGAAAGGCAGTGAGAGCTGGTGTAGTTCCAACCTTAATGCAGCTTCTCACCGAGCCTGGAACCGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTTGCTAGCCATCCCGAAGGGAAAGCTGCCATCGGATCTGCGAAGGCAGTGCCGGTTTTGGTAGATGTTATTGGGACAGGTTCCCCCAGGAACAGAGAGAATGCAGCTGCAGTTCTCGTGCACCTCTGCTCGGGAGACGAGCAACACCTAGTAGAGGCGAGGGAACTTGGAGTGGTTAGTCCATTGATAGATTTGGCACGCAGTGGCACAGATAGAGGAAAGCGAAAAGCTGCACAGTTGCTTGAGCGAATAAACCGACTGTTTGAGCACACAGCGCATACGGAGGTGCTTCGGTTGCAAGCGCCAGAGTCTCAACCTCAAAGCCAGCCATCACAATCGACCTCAACAACGGAAGTCGTTGGTAGCTGAGAGTGGAGTTTGATCTTTGCTTTACACAGCTCCGTTTCTTTTGTTCCTTTTTACATGTAAGAGGCAGCTTTGCTTCACAAGGGGAGGTGGAAGATCACCTGCCTAATCTGTAAGTTATTATCATAATTTATAATTTTATTTTGTATCTTTCTTTTTTGAAGGGAAACCATCTTTGAACAAAAAGGGAAAGAATCTAAAGCCCAATGTATGAATGAATCATTATACATCCTCAAATTTTTTGAGAGGAAAA 2484 44.77 MEEDNGALIRSLIDVVNEIAWISDFRYTVKKQYCNLSRRLKLLIPMFEEIRDSKESLSEDTLKALVLLKEALESAKKLLRFGSEGSKIFLAIEREQIMNKFHEVTAQLEQALEGIAYDKLDISDEVKEQVELVLAQFRRAKGRADAPDFELSDDILALYNTSNDSSIDQDRLRRLSEKLQLIGISDLTQESIALHEMVSATDGDPGQSIEKMAGLLKKIKDFVQTENLETDTPSREKSPPASCSGQVSNDKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSARPCRSSSSCSPAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHPEGKAAIGSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLVEARELGVVSPLIDLARSGTDRGKRKAAQLLERINRLFEHTAHTEVLRLQAPESQPQSQPSQSTSTTEVVGS 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20447784 20453014 + XM_039038547.1 Bhi08g00620 40953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00620 667 Pfam Armadillo/beta-catenin-like repeat 468 506 IPR000225 GO:0005515
Bhi08g00620 667 Pfam Armadillo/beta-catenin-like repeat 385 424 IPR000225 GO:0005515
Bhi08g00620 667 Pfam Armadillo/beta-catenin-like repeat 550 589 IPR000225 GO:0005515
Bhi08g00620 667 SUPERFAMILY ARM repeat 356 629 IPR016024 -
Bhi08g00620 667 CDD RING-Ubox_PUB 262 304 IPR045210 -
Bhi08g00620 667 Gene3D - 343 663 IPR011989 -
Bhi08g00620 667 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Bhi08g00620 667 MobiDBLite consensus disorder prediction 234 253 - -
Bhi08g00620 667 SMART arm_5 549 589 IPR000225 GO:0005515
Bhi08g00620 667 SMART arm_5 508 548 IPR000225 GO:0005515
Bhi08g00620 667 SMART arm_5 426 466 IPR000225 GO:0005515
Bhi08g00620 667 SMART arm_5 467 507 IPR000225 GO:0005515
Bhi08g00620 667 SMART arm_5 385 425 IPR000225 GO:0005515
Bhi08g00620 667 SMART arm_5 591 631 IPR000225 GO:0005515
Bhi08g00620 667 MobiDBLite consensus disorder prediction 227 256 - -
Bhi08g00620 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Bhi08g00620 667 Gene3D - 7 117 IPR036537 GO:0007166
Bhi08g00620 667 SUPERFAMILY RING/U-box 255 334 - -
Bhi08g00620 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 396 438 IPR000225 GO:0005515
Bhi08g00620 667 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 645 - -
Bhi08g00620 667 MobiDBLite consensus disorder prediction 644 667 - -
Bhi08g00620 667 PANTHER U BOX DOMAIN-CONTAINING 7 645 - -
Bhi08g00620 667 Pfam U-box domain 258 328 IPR003613 GO:0004842|GO:0016567
Bhi08g00620 667 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Bhi08g00620 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 331 IPR013083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi08g00620 Bhi10g00688 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g02047 Bhi-Chr2:55563195 Bhi08g00620 Bhi-Chr8:20447784 5.24E-172 dispersed
Bhi03g00520 Bhi-Chr3:10043410 Bhi08g00620 Bhi-Chr8:20447784 1.68E-59 dispersed
Bhi07g00814 Bhi-Chr7:28780373 Bhi08g00620 Bhi-Chr8:20447784 0 dispersed
Bhi07g01438 Bhi-Chr7:42393080 Bhi08g00620 Bhi-Chr8:20447784 4.64E-17 dispersed
Bhi08g00620 Bhi-Chr8:20447784 Bhi10g00687 Bhi-Chr10:15015036 0 dispersed
Bhi08g00619 Bhi-Chr8:20447784 Bhi08g00620 Bhi-Chr8:20447784 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00620 - - csv:101218572 1138.64