Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00621 CCTAAAAATATAATAAAACAAAAAGATAAGGAAGAAAGAATGAAAGAGAGAATAAGAGAGCAAAGTTAAACAAAAGCTTCCACACCATAGCTTTAATTCTCTCCCTTCTCTTCCCTCTTCTCTTCATCTTTTCTTTCTTTGCCTTTGCCTTTGCCTTTGCCTTTTTTCCTCTTTTCTTTTGCTTTCTTTTGTGTTTTTGGCTCTGGTATTCCCCAAGTGCATGCGATTCTCCACCTTGGTTTTTCCTAAAGACACATCAAATTTTTTTGCTTTATAAAAAGATATCAATCCCACAACCCCATGGATTTCTCTTCTGTTCCAATCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCCAATCATCATCATCATCATCTTCCTCAGGTAAGCAATAATAATGGATCTCCTCAACACCAACACCAACACCTTCTTTCATTGCCAACTCAACAACTCTCATCTGCACCGTCGTCTCATGTCGGTGGTGTTGGATCGATCCGGCGCGGTTCCATGGCTGACCGAGCTCGGATGGCTAACGTACCACTACCGGAGACAGCGCTCAAGTGTCCTCGATGTGATTCTACCAACACGAAGTTTTGTTACTTTAATAACTATAGTCTCTCTCAGCCTCGCCACTTTTGTAAGAGCTGCCGCCGATATTGGACTCGTGGGGGTGCCCTAAGGAACGTTCCGGTTGGGGGCGGTTGTCGTAGGAATAAGAAGAATAAAACTAGACGATCGAAGTCTCCGGCGGCGACAGCGGCGGTCGGGAATGGAAGTCAAGTGATGAATAACAATTCAAACTCACCCACCACTACTACAGTTTCATTGCACAATAGTGCTGAGAATATTATTGGTCATTTACAGCCTCAACATCCTCATCTTTCATTCATGGCTTCGTTGAATAATTTTTCTCGATACGGAACAACGAGTTTAGGGTTGAATTTTAACGAGATCCAGGCTCAAGCTAACGATATCGGTAACGGTGCCGTTCTGAATCTTCATCCGTGGCGCAGTTCCCAAAACTTTCCTCTGTCAGGTGGCTTAGAAACCCCCTCGGGGTTGTACCCCTTTCAAATTAGCAGCGGCGGCGATGGCGACGACAACAACGCAACAAATTCAATCTTAACACCAAATTCAAGAGCAACCCATTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTATTGAAATCATCCAATTTGGGTATCAATAATTCTGAAAACACTCAATTTTGGAGCAATGGAAATGGTTGGACAGATCTTTCAGCAATCAGTTCAACTTCAAGTGGCCATATTTCTTGTGACTTCAATCATTAAAAGCCCCAATTGATCAGATCATCATCTTCAAATTGGCATCTCTCAGCTCACAGCTTTGTAGTAAGTTTCATTTATATATATCAACTTAATTACCAAGGATTTAAATGGTCAAGTGATTTGATGCAAATTTATTAAGCTGATTAAATTAAAAAAAAAAAAAAACTAAAATTAAGCCATCACTTGATCAGTTAAATCTTTTATTAATTAAGCTACTTAGGCTTTATAGAAATTAATCATATATTATAACAAAAAATATCCAGGCACTCATCTAGCTCTCTTCAGCCTCTCTCAAATCTTGATCAACACTCAGAAACTGTTACAACCTTCAAAAAAGATCACATTCTGATCCTCCATGGTAGTTTGTGCTCTTCTCTTTATCTTTCTATTTTATACAAAAAGATTGTGCTTTGTAGAAATATTGTTTTTTTCCCCTTTCAATTTCTTTTTGAGAATGTGTGTGACTATGATTTGGTTATGTTTGTTGGATTTAAATGGAAGAATATGGTTTTTTGTTTGTGTATAAAA 1851 38.95 MDFSSVPIYLDPPPNWHQQSNHHHHHLPQVSNNNGSPQHQHQHLLSLPTQQLSSAPSSHVGGVGSIRRGSMADRARMANVPLPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKSCRRYWTRGGALRNVPVGGGCRRNKKNKTRRSKSPAATAAVGNGSQVMNNNSNSPTTTTVSLHNSAENIIGHLQPQHPHLSFMASLNNFSRYGTTSLGLNFNEIQAQANDIGNGAVLNLHPWRSSQNFPLSGGLETPSGLYPFQISSGGDGDDNNATNSILTPNSRATHLPPVKIEETQVLNLLKSSNLGINNSENTQFWSNGNGWTDLSAISSTSSGHISCDFNH 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20475529 20477545 + XM_039039404.1 Bhi08g00621 40954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00621 341 Pfam Dof domain, zinc finger 86 141 IPR003851 GO:0003677|GO:0006355
Bhi08g00621 341 MobiDBLite consensus disorder prediction 12 71 - -
Bhi08g00621 341 MobiDBLite consensus disorder prediction 259 287 - -
Bhi08g00621 341 MobiDBLite consensus disorder prediction 25 60 - -
Bhi08g00621 341 MobiDBLite consensus disorder prediction 133 173 - -
Bhi08g00621 341 MobiDBLite consensus disorder prediction 259 281 - -
Bhi08g00621 341 ProSitePatterns Zinc finger Dof-type signature. 89 125 IPR003851 GO:0003677|GO:0006355
Bhi08g00621 341 ProSiteProfiles Zinc finger Dof-type profile. 87 141 IPR003851 GO:0003677|GO:0006355
Bhi08g00621 341 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 333 IPR045174 GO:0003700|GO:0006355
Bhi08g00621 341 MobiDBLite consensus disorder prediction 148 173 - -
Bhi08g00621 341 PANTHER DOF ZINC FINGER PROTEIN DOF2.4-LIKE 11 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00402 Bhi-Chr3:8050040 Bhi08g00621 Bhi-Chr8:20475529 1.68E-36 dispersed
Bhi03g01897 Bhi-Chr3:40387931 Bhi08g00621 Bhi-Chr8:20475529 1.13E-29 dispersed
Bhi08g00621 Bhi-Chr8:20475529 Bhi11g02243 Bhi-Chr11:61405297 9.13E-54 dispersed
Bhi01g03336 Bhi-Chr1:83972145 Bhi08g00621 Bhi-Chr8:20475529 2.50E-15 transposed
Bhi02g00056 Bhi-Chr2:1130090 Bhi08g00621 Bhi-Chr8:20475529 2.45E-33 transposed
Bhi03g01887 Bhi-Chr3:39938822 Bhi08g00621 Bhi-Chr8:20475529 4.74E-32 transposed
Bhi04g01807 Bhi-Chr4:44549561 Bhi08g00621 Bhi-Chr8:20475529 2.51E-32 transposed
Bhi07g00911 Bhi-Chr7:30616198 Bhi08g00621 Bhi-Chr8:20475529 2.08E-69 transposed
Bhi11g00877 Bhi-Chr11:27165976 Bhi08g00621 Bhi-Chr8:20475529 4.46E-35 transposed
Bhi10g00686 Bhi-Chr10:15007072 Bhi08g00621 Bhi-Chr8:20475529 2.67E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1652 PF02701 zf-Dof 1.40E-32 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00621 - - csv:101218334 573.548