Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi08g00621 | CCTAAAAATATAATAAAACAAAAAGATAAGGAAGAAAGAATGAAAGAGAGAATAAGAGAGCAAAGTTAAACAAAAGCTTCCACACCATAGCTTTAATTCTCTCCCTTCTCTTCCCTCTTCTCTTCATCTTTTCTTTCTTTGCCTTTGCCTTTGCCTTTGCCTTTTTTCCTCTTTTCTTTTGCTTTCTTTTGTGTTTTTGGCTCTGGTATTCCCCAAGTGCATGCGATTCTCCACCTTGGTTTTTCCTAAAGACACATCAAATTTTTTTGCTTTATAAAAAGATATCAATCCCACAACCCCATGGATTTCTCTTCTGTTCCAATCTATTTAGATCCTCCTCCCAATTGGCATCAGCAATCCAATCATCATCATCATCATCTTCCTCAGGTAAGCAATAATAATGGATCTCCTCAACACCAACACCAACACCTTCTTTCATTGCCAACTCAACAACTCTCATCTGCACCGTCGTCTCATGTCGGTGGTGTTGGATCGATCCGGCGCGGTTCCATGGCTGACCGAGCTCGGATGGCTAACGTACCACTACCGGAGACAGCGCTCAAGTGTCCTCGATGTGATTCTACCAACACGAAGTTTTGTTACTTTAATAACTATAGTCTCTCTCAGCCTCGCCACTTTTGTAAGAGCTGCCGCCGATATTGGACTCGTGGGGGTGCCCTAAGGAACGTTCCGGTTGGGGGCGGTTGTCGTAGGAATAAGAAGAATAAAACTAGACGATCGAAGTCTCCGGCGGCGACAGCGGCGGTCGGGAATGGAAGTCAAGTGATGAATAACAATTCAAACTCACCCACCACTACTACAGTTTCATTGCACAATAGTGCTGAGAATATTATTGGTCATTTACAGCCTCAACATCCTCATCTTTCATTCATGGCTTCGTTGAATAATTTTTCTCGATACGGAACAACGAGTTTAGGGTTGAATTTTAACGAGATCCAGGCTCAAGCTAACGATATCGGTAACGGTGCCGTTCTGAATCTTCATCCGTGGCGCAGTTCCCAAAACTTTCCTCTGTCAGGTGGCTTAGAAACCCCCTCGGGGTTGTACCCCTTTCAAATTAGCAGCGGCGGCGATGGCGACGACAACAACGCAACAAATTCAATCTTAACACCAAATTCAAGAGCAACCCATTTGCCTCCAGTGAAGATTGAAGAAACCCAAGTGCTGAATTTATTGAAATCATCCAATTTGGGTATCAATAATTCTGAAAACACTCAATTTTGGAGCAATGGAAATGGTTGGACAGATCTTTCAGCAATCAGTTCAACTTCAAGTGGCCATATTTCTTGTGACTTCAATCATTAAAAGCCCCAATTGATCAGATCATCATCTTCAAATTGGCATCTCTCAGCTCACAGCTTTGTAGTAAGTTTCATTTATATATATCAACTTAATTACCAAGGATTTAAATGGTCAAGTGATTTGATGCAAATTTATTAAGCTGATTAAATTAAAAAAAAAAAAAAACTAAAATTAAGCCATCACTTGATCAGTTAAATCTTTTATTAATTAAGCTACTTAGGCTTTATAGAAATTAATCATATATTATAACAAAAAATATCCAGGCACTCATCTAGCTCTCTTCAGCCTCTCTCAAATCTTGATCAACACTCAGAAACTGTTACAACCTTCAAAAAAGATCACATTCTGATCCTCCATGGTAGTTTGTGCTCTTCTCTTTATCTTTCTATTTTATACAAAAAGATTGTGCTTTGTAGAAATATTGTTTTTTTCCCCTTTCAATTTCTTTTTGAGAATGTGTGTGACTATGATTTGGTTATGTTTGTTGGATTTAAATGGAAGAATATGGTTTTTTGTTTGTGTATAAAA | 1851 | 38.95 | MDFSSVPIYLDPPPNWHQQSNHHHHHLPQVSNNNGSPQHQHQHLLSLPTQQLSSAPSSHVGGVGSIRRGSMADRARMANVPLPETALKCPRCDSTNTKFCYFNNYSLSQPRHFCKSCRRYWTRGGALRNVPVGGGCRRNKKNKTRRSKSPAATAAVGNGSQVMNNNSNSPTTTTVSLHNSAENIIGHLQPQHPHLSFMASLNNFSRYGTTSLGLNFNEIQAQANDIGNGAVLNLHPWRSSQNFPLSGGLETPSGLYPFQISSGGDGDDNNATNSILTPNSRATHLPPVKIEETQVLNLLKSSNLGINNSENTQFWSNGNGWTDLSAISSTSSGHISCDFNH | 341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20475529 | 20477545 | + | XM_039039404.1 | Bhi08g00621 | 40954 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi08g00621 | 341 | Pfam | Dof domain, zinc finger | 86 | 141 | IPR003851 | GO:0003677|GO:0006355 | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 12 | 71 | - | - | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 259 | 287 | - | - | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 25 | 60 | - | - | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 133 | 173 | - | - | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 259 | 281 | - | - | |
Bhi08g00621 | 341 | ProSitePatterns | Zinc finger Dof-type signature. | 89 | 125 | IPR003851 | GO:0003677|GO:0006355 | |
Bhi08g00621 | 341 | ProSiteProfiles | Zinc finger Dof-type profile. | 87 | 141 | IPR003851 | GO:0003677|GO:0006355 | |
Bhi08g00621 | 341 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 11 | 333 | IPR045174 | GO:0003700|GO:0006355 | |
Bhi08g00621 | 341 | MobiDBLite | consensus disorder prediction | 148 | 173 | - | - | |
Bhi08g00621 | 341 | PANTHER | DOF ZINC FINGER PROTEIN DOF2.4-LIKE | 11 | 333 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi03g00402 | Bhi-Chr3:8050040 | Bhi08g00621 | Bhi-Chr8:20475529 | 1.68E-36 | dispersed | |
Bhi03g01897 | Bhi-Chr3:40387931 | Bhi08g00621 | Bhi-Chr8:20475529 | 1.13E-29 | dispersed | |
Bhi08g00621 | Bhi-Chr8:20475529 | Bhi11g02243 | Bhi-Chr11:61405297 | 9.13E-54 | dispersed | |
Bhi01g03336 | Bhi-Chr1:83972145 | Bhi08g00621 | Bhi-Chr8:20475529 | 2.50E-15 | transposed | |
Bhi02g00056 | Bhi-Chr2:1130090 | Bhi08g00621 | Bhi-Chr8:20475529 | 2.45E-33 | transposed | |
Bhi03g01887 | Bhi-Chr3:39938822 | Bhi08g00621 | Bhi-Chr8:20475529 | 4.74E-32 | transposed | |
Bhi04g01807 | Bhi-Chr4:44549561 | Bhi08g00621 | Bhi-Chr8:20475529 | 2.51E-32 | transposed | |
Bhi07g00911 | Bhi-Chr7:30616198 | Bhi08g00621 | Bhi-Chr8:20475529 | 2.08E-69 | transposed | |
Bhi11g00877 | Bhi-Chr11:27165976 | Bhi08g00621 | Bhi-Chr8:20475529 | 4.46E-35 | transposed | |
Bhi10g00686 | Bhi-Chr10:15007072 | Bhi08g00621 | Bhi-Chr8:20475529 | 2.67E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1652 | PF02701 | zf-Dof | 1.40E-32 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi08g00621 | - | - | csv:101218334 | 573.548 |