Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi08g00916 | TGGTGTGAGAGATCATAAGAAGAGAGAGGGAGGAGTGTATCCAAATTGTGCAGCCAAATTCCTATTGTTTATAAAGGGGCAGAGAGAGAGAGGGAGAGGAGGGAATTAGAGGTACCCTAGAGAATTAGGGACGGGCCACGTGTCGGGAGACAAGAGGACGATGAAGACGGAGAACGGGAGGAAACAAGGGGGAGGAGCAGCCCCATGCGCAGCATGCAAGCTTCTAAGAAGAAGATGTGGAGAGGAATGTGTATTTGCTCCATACTTTCCAGCAGACCAACCCCATAAGTTTGCCAATGTTCATAAGGTCTTTGGCGCTAGCAATGTCAACAAAATGCTTCAGGAGTTGCCAATTCACCAACGAGGAGATGCAGTGAGCAGTTTAGTGTACGAAGCAAATGCTCGAGTGCGCGACCCGGTGTACGGGTGCGTCGGAGCAATATCGTCTTTGCAGCAGCAGATAGACACCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTAAGGGTGCGTCAGACAGCATCGTTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGATCGCCCTCATCCAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGCTGTGGACCAAGCCATAGGGGACTCAATGTGGTAATATATCATACTATTATTATTATTTGCCCAAAATCCCATTTCCATGGAGATTTAGTTAGTTTTGCTTCTTTTTTTTTCCTACCCTATTTTGTCAATTTGGCTTTCATTTGGTTGTTGGCCATTTGCTATCCTGATCTTTACTATATAGTTATTTACTTACTTTTCATTTATGCCGACCTGAGCGGAGCTCAAGTAGTCAGGTAATGTCTCCCTTTTTTAAGTTAGGGTTGAATTTTCTTCCCTATTTATAGTGTAATATTTTTAAGAAACTCGTATACAAATATATATATATCTAAACATATCATTGAGATGTTATGTCA | 992 | 44.25 | MKTENGRKQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDTLQTQLALAQAEVVHLRVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMAVDQAIGDSMW | 170 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30291794 | 30296053 | - | XM_039039255.1 | Bhi08g00916 | 41249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi08g00916 | 170 | Pfam | Lateral organ boundaries (LOB) domain | 15 | 112 | IPR004883 | - | |
| Bhi08g00916 | 170 | Coils | Coil | 94 | 121 | - | - | |
| Bhi08g00916 | 170 | MobiDBLite | consensus disorder prediction | 129 | 152 | - | - | |
| Bhi08g00916 | 170 | ProSiteProfiles | LOB domain profile. | 14 | 115 | IPR004883 | - | |
| Bhi08g00916 | 170 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 3 | 5 | 157 | - | - | |
| Bhi08g00916 | 170 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 5 | 157 | - | - | |
| Bhi08g00916 | 170 | MobiDBLite | consensus disorder prediction | 129 | 150 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi05g02025 | Bhi-Chr5:62169715 | Bhi08g00916 | Bhi-Chr8:30291794 | 1.93E-66 | dispersed | |
| Bhi07g00472 | Bhi-Chr7:20663568 | Bhi08g00916 | Bhi-Chr8:30291794 | 1.63E-48 | dispersed | |
| Bhi07g00520 | Bhi-Chr7:21686378 | Bhi08g00916 | Bhi-Chr8:30291794 | 2.34E-59 | dispersed | |
| Bhi08g00414 | Bhi-Chr8:15360528 | Bhi08g00916 | Bhi-Chr8:30291794 | 2.43E-49 | dispersed | |
| Bhi08g00916 | Bhi-Chr8:30291794 | Bhi10g00845 | Bhi-Chr10:17099147 | 4.06E-53 | dispersed | |
| Bhi09g03239 | Bhi-Chr9:83251613 | Bhi08g00916 | Bhi-Chr8:30291794 | 1.06E-09 | dispersed | |
| Bhi12g02627 | Bhi-Chr12:81164454 | Bhi08g00916 | Bhi-Chr8:30291794 | 5.43E-37 | dispersed | |
| Bhi08g00916 | Bhi-Chr8:30291794 | Bhi10g00963 | Bhi-Chr10:19755429 | 8.43E-81 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 1662 | PF03195 | LOB | 2.00E-43 | No_clan | Bhi | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi08g00916 | - | - | csv:101202930 | 288.5 |