Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00942 TGGATTGGATTGAATCACGAGCCGCATCAAAATTAGCCTCTCAATCGATTCCGAGTTTCTGTTCATGGCTGGTTTCGGTTAAACCGCGTGCTTTTAGCGGGTTTTCTCTTTCTCTTTCTACTTCTCTGATCCTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTACCCCCTTTTTCAGTTTTCATATCAAACAAAAGATCCATTCCTGAAGTCCCAAAGGAATTTACATCCCATTTATTTTTCTTCCTTCCTTATTTACTTCCCTTAATTTCGTCATTTATTTCCACATTATTTGTTCTTATTATACTATTCTATATACTGCGATTTTTCCGTAATTTACTTTAGAGGAGAGAGAAGAAGAATTGCGGTTTCTGTTTCGGTTTCGGTTCAATTCAACCTCACCCCTTTTGAGTTTATAACCTTATTGAGGTTTTCATGACATTGTAGCCGATGGACCAGAATAAATTGGAAGCAGATTCTGAGGCAAAAGGGGATTATTCTTCCAGGAGTAGCAATAAAAGTAACCAGACTGTTGAGAGGTCGGGAAGTCCTCAGCATCAGAAGATTTCAGCTAGGTGGGACCCGGATGAAGCATGCAGGCCTTTAATTGATGAAGCACCTGTATTTTATCCTACTGTTGAGGAATTTGAAGATACACTTGGGTACATTGCTAAGATTCGTCCTCAAGCTGAATCTTATGGTATATGCCGGATTGTCCCTCCGTCTTCTTGGAATCCACCATGTGTTCTCAAGGAGAAATGTATATGGGAAAATGCCATGTTTTCTACTCGTATTCAGCAAGTCGATTTGCTACAAAATAGGGAGCCCATGAAAAAGAAAAGTAGAGGAAGAAAACGCAAGCGAAGGAAGCACTCAAAAACAGGATCATCAGCTAGATGCATGAATCTGGGTGTAGAAGCAAACGTTACTTCTGAGTCTGATGAAAAATTTGGATTCAATTCTGGGTTAGACTTCACACTCAAAGATTTCCAGGCATATGCAGACTATTTTAAGGAACGTTATTTTGGAATTAAGAAGGCTCAAGAGGATTTAAATTTTGATATTGAACCTACCAAGAGATGGGAGCCTTCTGTGGAGGATATAGAGGGTGAATACTGGCGGATAGTTGAAAAATCTACCGATGAGGTTGAGGTTTACTATGGAGCTGATATAGAATCAGCAACATTTTGCAGTGGCTTTCCTAAGGCCTCATCCCTGGTAACAGATGGAAATTCGGATCCGTACGTAAAGTCAGGTTGGAATCTTAATAACTTCCCTCGTTTGCCAGGTTCTGTTCTTTGCTTTGAGGAAAGTGATATATCTGGAGTTCTAGTGCCATGGCTCTATGTCGGAATGTGCTTTTCCTCCTTTTGTTGGCATGTTGAAGACCACCATCTTTACTCTTTAAACTATATGCACTGGGGAGATCCAAAAGTATGGTATGGAGTTCCGGGAAGCCACGCTTCTTCTTTAGAAGCTGCGATGAAAAAACATTTGCCTGATTTGTTTGCGGAACAGCCAGATTTACTTCATGAATTGGTCACTCAATTATCTCCTTCAGTACTCAAATCTGAAGGAGTACCTGTGTATCGAGTGGTCCAAAATTCCAGGGAGTTTGTTCTTACCTTTCCAAGGGCATATCATGCAGGTTTTAATTGTGGTTTCAACTGTGCTGAGGCTGTGAATGTGGCACCAGTTGACTGGTTGGTTCATGGGCAAAATGCCATAGAACTTTATAGTGCGCAACGGCATAGGACATCACTTTCACATGATAAATTGTTATTCGGTTCAGCTCGGGAAGCTGCCCAGGCCCTTTGGGAGATATTAGTTCTAGAAAAGAAAACTCCGAGTATTCTAAATTGGAAAAGTGTCTGTGGAATAGATGGAGATCTTACAAAAGTGATCAAGACAAGAGTGAAGATGGAGGAGGAAAGAATGAATTGCCTTCCAACTAATATGAAGTTGCAAAAGATGGAAAGTGAGATTGATTGCAAAAGTGAAAGAGAGTGTTTTGCCTGCTTCTATGACTTATATCTCTCTTCAACCTCCTGCAAGTGTTCCCCCAATCGGTTCTCATGCCTTAAGCATGCTAGTAACTTTTGCTCGTGTCAAGTAGATGACAGGTGTGTTCTCTTTCGCTACAGTTTAAATGAGCTACACACACTTGTCGGAGCACTAGAAGGGGGGTTTGATGCCATTAAAGAATGGGCCTCAAGATACTGTAAAATGGAAAAGGACAATGAATCTGTAACCAAGGTTGAGTTGGACAGCGGATTAAATGAAAAACCATCTTGGTCCCCTGAAATAACAGATAATCTTAAAAGAACAGACGTCCCATGCAGTTCATCTAGCCATGCTTCTTCAGAAGTAGTGCAGTCAGAGTTTCATCGTGGATCACTTAGCCTTAATAATTCCCACCTTAGTTCCGATAGTCAAAATGACATTGTCAATAGTGAAGTTATGGTAATAAATAAAGGCAAGAAGGTGGAGCAGGAGTGCTGCATTGATTTGAACATTGACATAATTTCTGACGGTAATGGTAGTTGTGGGCCCCACAAATCGGATAGCAAGATAATCGTTGATTTGGATGAAACTTACCATTCGGTGTTTGCAGAAAAATACATTTGTAAAGCAGAACATGAATCAGATTTAATGAATATGGACACTGATCATGTAAACACTCCTCCGGTTAATGATTACTCTTCAAGTGTAGAAGATGGTGTGAGAATGTGTGGATCTAACGCCAGTAAGTTGTTTGGAGTTGATCTTTTGCAGTCGCAGTCGCAGTCAGCATTTCCATCCAACAACTACTCAAAAGTAGAAACTTTAAAACACTTAGATAAAAGGATGCCTTCTTGGCTAAGTTCTCCTTGGAAATTGGTTCCTTTTGTTGAACCTATAAATATTGGAACCATTATGTTTGGAAAGCCTTGGCACTGCGAGAAGGCCATATTTCCAAAAGGATTTAGAAGTCGAGTCAAATTCTTTAGTGTGCTTAATCCAACTAGTATCGTTACCTACACATCAGAAGTTCTTGATGCTGGGCTCCTGGGACCTCTATTCAAGGTGACCTTGGAAGAATCTCCCGGTGAAAACTTCACTAATGTCTCAGCAACCAAATGTTGGGACATGATAGTACAGAGAATAAACCAAGAAATCGAAAAACAGAACCTTAGATTGGGAGGAATACTTCCTTTGCAGCTTTTGAAGGAAGTTAATGGACTTGAAATGTTTGGATTTCTTTCACCTCCTGTTATCCAGGCTATCGAGGCTCTTGATCCTAAACACCAGTGTATGGAGTATTGGAACCACCGGCAGCAGTACGCAATACCCGCAAATTCAGGGAAGAGGATGAAACTGTCACTCCAACTATAGGAATGGAAGGGCATCATCAAAATGAA 3404 40.33 MDQNKLEADSEAKGDYSSRSSNKSNQTVERSGSPQHQKISARWDPDEACRPLIDEAPVFYPTVEEFEDTLGYIAKIRPQAESYGICRIVPPSSWNPPCVLKEKCIWENAMFSTRIQQVDLLQNREPMKKKSRGRKRKRRKHSKTGSSARCMNLGVEANVTSESDEKFGFNSGLDFTLKDFQAYADYFKERYFGIKKAQEDLNFDIEPTKRWEPSVEDIEGEYWRIVEKSTDEVEVYYGADIESATFCSGFPKASSLVTDGNSDPYVKSGWNLNNFPRLPGSVLCFEESDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGDPKVWYGVPGSHASSLEAAMKKHLPDLFAEQPDLLHELVTQLSPSVLKSEGVPVYRVVQNSREFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLVHGQNAIELYSAQRHRTSLSHDKLLFGSAREAAQALWEILVLEKKTPSILNWKSVCGIDGDLTKVIKTRVKMEEERMNCLPTNMKLQKMESEIDCKSERECFACFYDLYLSSTSCKCSPNRFSCLKHASNFCSCQVDDRCVLFRYSLNELHTLVGALEGGFDAIKEWASRYCKMEKDNESVTKVELDSGLNEKPSWSPEITDNLKRTDVPCSSSSHASSEVVQSEFHRGSLSLNNSHLSSDSQNDIVNSEVMVINKGKKVEQECCIDLNIDIISDGNGSCGPHKSDSKIIVDLDETYHSVFAEKYICKAEHESDLMNMDTDHVNTPPVNDYSSSVEDGVRMCGSNASKLFGVDLLQSQSQSAFPSNNYSKVETLKHLDKRMPSWLSSPWKLVPFVEPINIGTIMFGKPWHCEKAIFPKGFRSRVKFFSVLNPTSIVTYTSEVLDAGLLGPLFKVTLEESPGENFTNVSATKCWDMIVQRINQEIEKQNLRLGGILPLQLLKEVNGLEMFGFLSPPVIQAIEALDPKHQCMEYWNHRQQYAIPANSGKRMKLSLQL 974
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30978710 30986752 + XM_039038232.1 Bhi08g00942 41275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00942 974 Pfam F/Y-rich N-terminus 817 861 IPR003888 GO:0005634
Bhi08g00942 974 PANTHER LYSINE-SPECIFIC DEMETHYLASE 13 957 - -
Bhi08g00942 974 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Bhi08g00942 974 MobiDBLite consensus disorder prediction 1 16 - -
Bhi08g00942 974 SMART fyrc_3 870 959 IPR003889 GO:0005634
Bhi08g00942 974 Pfam jmjN domain 57 90 IPR003349 -
Bhi08g00942 974 ProSiteProfiles JmjC domain profile. 264 430 IPR003347 -
Bhi08g00942 974 SMART JmjN_1 55 96 IPR003349 -
Bhi08g00942 974 Pfam F/Y rich C-terminus 868 955 IPR003889 GO:0005634
Bhi08g00942 974 MobiDBLite consensus disorder prediction 1 45 - -
Bhi08g00942 974 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ14-RELATED 13 957 - -
Bhi08g00942 974 Pfam C5HC2 zinc finger 520 571 IPR004198 -
Bhi08g00942 974 MobiDBLite consensus disorder prediction 128 145 - -
Bhi08g00942 974 SUPERFAMILY Clavaminate synthase-like 256 457 - -
Bhi08g00942 974 ProSiteProfiles FYR domain FYRN motif profile. 806 864 IPR003888 GO:0005634
Bhi08g00942 974 Pfam JmjC domain, hydroxylase 297 413 IPR003347 -
Bhi08g00942 974 ProSiteProfiles FYR domain FYRC motif profile. 866 955 IPR003889 GO:0005634
Bhi08g00942 974 MobiDBLite consensus disorder prediction 17 38 - -
Bhi08g00942 974 Gene3D Cupin 41 414 - -
Bhi08g00942 974 MobiDBLite consensus disorder prediction 122 146 - -
Bhi08g00942 974 Gene3D - 814 949 - -
Bhi08g00942 974 SMART fyrn_3 820 864 IPR003888 GO:0005634
Bhi08g00942 974 SMART cupin_9 264 430 IPR003347 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00942 Bhi-Chr8:30978710 Bhi08g00944 Bhi-Chr8:30979196 0 dispersed
Bhi08g00941 Bhi-Chr8:30978504 Bhi08g00942 Bhi-Chr8:30978710 0 tandem
Bhi08g00942 Bhi-Chr8:30978710 Bhi08g00943 Bhi-Chr8:30979196 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1666 PF02373 JmjC 3.90E-45 CL0029 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00942 - - csv:101214856 1746.48