Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g00957 AGTTCACAATCGACCCCCAAAGCTTCTTAAATTTGACTCTTCAAGAATCTCACTACAACCCCTCCACTTCTATTTTATTCTCTCTCTCTCCTCTCATGTTGCGTATAGAAGAGAAGTGGTTTTTGTGAGAGGGAAAGTCAGCGTCTTATTTCTCTCTCCATAATTCCCTCCTCAAATTTTCATTTCCATTTCCAATTTCTTTCTCAATAATTTCACCGGCGACAAAAATTCTGCATGTTTTCCGATTGGTCTCCGGTCGACAGTACAGACAACTTCAAAAAATGTTCTGTAGTTTGTTTGAGATGGACGATAATTATCAGCAAGCTGGTGATTTGACTGATGTAATTCGACCCACTTCCGCCGCCGTCCCCGGTGGCCTCTCATCGGAATTCTCTCTCGACCCTTTTTCCGGTGACCGACTACGCTGGCCTCACCATCCCGCCGATGATTCTTCCATGAATTTTGGAGATCCGTCGTTGTTTCCGACTAGTAGTGTTCGAGATCCGTTTCTTCATCCCCATTTTTCTGCCTTCAATTTTACTTCTGACGGCGGCGCTGAGGGTTTGGCGGCCGCGGACCAGCCGTCTAATTTACTTTCACATATGTTGCAGATCTCCCCGAGTTCCGGTGATGGTGTAATTAGTACTCCTCCATGTGAGTCTCTCGCAACGACGGTGAGGAATTCTCCGAGCTCAGCTTCCACTTGCGGTGGTGGTGGCATGGTTCCAACCGGTGGCTCGAACCCTCTTTGCTTAATGGAGAATTCTGGGATTCAGATCTCTTCCCCACGAAGTTCGGCCACCAAAAGAAGGAAGAGCCAAGTGAAGAAGGTGGTATGTATTCCGGCACCGGCACCGGCGAACAGCCGATCAAGCAGCGGCGAAGTGGTTCCTTCTGATCTATGGGCATGGAGGAAGTACGGACAAAAGCCCATCAAAGGATCCCCATATCCAAGGGGATATTATAGGTGCAGCAGCTCCAAGGGTTGTTCCGCTCGAAAGCAAGTTGAGCGCAGTCGAACCAATCCGAACATGCTTGTCATCACTTACACCTCGGAGCACAACCACCCATGGCCGACTCAACGCAACGCCCTTGCAGGCTCGACCCGTTCCCACCCATCTCGAACCCCCGCCACCGCCACCGCTCGTAAAACAAGCCCAAAACATGAGCCCACCAACGACAACGTCCTACCAACTGCAGCAGTAAAGGAGGAAGAGATAGATGAAAACCAAACGACAAATAAAGCAACAACAATAAACGATCATCAGGATGAGGTAGATCATCAGGAGTTTCCTTATGACCTAATTTTCACTGAATTCTCTGAGCAAATCAACAACCACGACCACGACCACAACCGCGACCATCATCATCTTTCAGCAGATCCTCTAAACAACAGTATGTTGATGTTTAGTAGCCATGGCTTTAGTACAGGAAATGGAGAAAGCAGTAAAGATCCATTTTTGGAGCTCTATGATTGGGCAGAGAATTCAAATGGAAGTTTGTTCAAAGAAGCCAAAGGAGGTTGATGGAGGGTAATGATCAAACCACAGTTTAAAGAGAGCTATATATATACAAATCAATATGAAAACTATATATAAATATTTAAACATTATATACACATGCACTTAGGCTAGCTTCTTATTTACCCTTTCTTTTTAAGTTAGTGTTTTCTTCTTCTTCTTCTTCTTGGTTGTTCTTGAGGTTAG 1706 45.9 MFCSLFEMDDNYQQAGDLTDVIRPTSAAVPGGLSSEFSLDPFSGDRLRWPHHPADDSSMNFGDPSLFPTSSVRDPFLHPHFSAFNFTSDGGAEGLAAADQPSNLLSHMLQISPSSGDGVISTPPCESLATTVRNSPSSASTCGGGGMVPTGGSNPLCLMENSGIQISSPRSSATKRRKSQVKKVVCIPAPAPANSRSSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTNPNMLVITYTSEHNHPWPTQRNALAGSTRSHPSRTPATATARKTSPKHEPTNDNVLPTAAVKEEEIDENQTTNKATTINDHQDEVDHQEFPYDLIFTEFSEQINNHDHDHNRDHHHLSADPLNNSMLMFSSHGFSTGNGESSKDPFLELYDWAENSNGSLFKEAKGG 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31343562 31347456 - XM_039039432.1 Bhi08g00957 41290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g00957 414 ProSiteProfiles WRKY domain profile. 199 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi08g00957 414 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 99 402 - -
Bhi08g00957 414 MobiDBLite consensus disorder prediction 261 292 - -
Bhi08g00957 414 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 99 402 IPR044810 GO:0003700
Bhi08g00957 414 MobiDBLite consensus disorder prediction 261 301 - -
Bhi08g00957 414 SUPERFAMILY WRKY DNA-binding domain 202 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi08g00957 414 Gene3D WRKY domain 177 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi08g00957 414 Pfam WRKY DNA -binding domain 206 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi08g00957 414 SMART WRKY_cls 204 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g00957 Bhi-Chr8:31343562 Bhi12g00774 Bhi-Chr12:23250334 1.53E-33 dispersed
Bhi01g00337 Bhi-Chr1:6101123 Bhi08g00957 Bhi-Chr8:31343562 3.90E-46 transposed
Bhi08g02157 Bhi-Chr8:61842228 Bhi08g00957 Bhi-Chr8:31343562 4.52E-33 transposed
Bhi03g00195 Bhi-Chr3:4389864 Bhi08g00957 Bhi-Chr8:31343562 6.51E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1669 PF03106 WRKY 4.20E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g00957 - - bhj:120083610 835.099