Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi08g01012 | TGATCATCGTGCCCTTTTCCTTTTTGTGAATTTGGCGGATTTTTTTCTTTTTGTTTCTGGAAATTTTATGAGCACCTAAGTTTTCTGTTGTTGTATCGATTTACTCGTCTTCGTTTTCTTCTTCGGAAACCTGATGAAATGGGTTTCCTTCTAAGATTTGGGGTTTCTTAGAACTTTTTGTTTTCTTTTTAGTAGTAGTAGAAGAAGAGAAGGGAGATTGATTTTTCCTCCCTCGGCGACTGTGCTGGGCGTTTCAACAACCCCATTGCCTTCGCCAGTGATGGAACCTCTTGGTCATTCAGCATTGCATGCTCGCCTTGGGTGAGCTAAAGATTGGATTGAGTTATGACGTCTTTTGTAAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGTTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAAGATTATGTTCAAGTATGTTGAACTCTGTGTGGATATGAGGAAAGGAAGGTTTGCGAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACCGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAGGCCTTGGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTTAGTGGTGAAAAGGGAAAGGATAGATCTGATCGCGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGAACGGTTCTTGAAATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGGTGTACAAAAGAACAACAGAATTTCGAAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCTCCAGAGAGCTTGCAATTATACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTGGTGTATTACGTCAAACTAACAGAGATCTTCTGGATATCGGATAGCAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCTATTCAGAAAAGTTTCAACAAAAATCTAAGCCAGAAGGATTTGCAGCTGATAGCTTCGTCTGTTCTTTTAGCAGCTCTTGCTGTGTCCCCCTATGACTCTAAGCATGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAACGGAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGCAAATCTTCTTTCTGAACTGGTCTCTAAAGGAGTCCTGAGCTGCGCAATTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCACGAGTTCTTCCCTCTTGATCTTGCAACAAAATTGCAACCCTTACTTAACAAAATATCAAAACTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAATTGTCCCAATATGTTCCGGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTACCAGACTATGAAAATTGAGAGTCTATCGCAGATAATCCCATTTTTTAATTTTTTTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCAAGGAACATCGTGTTATTTGGCAATTTGGGTATCGAATCAGATGGGCTTCGAGACCACCTGACCGTTCTGGCTGAATCCTTGAACAAAGCAAGAGCTATGATCTATCCTCCAGTTAGGAAAGCCTCAAAAACAAGTGATAAATTGCCTGACTTGGCAGATATTGTTGATAAAGAGCACAAGAGGTTGCTTGCTCGAAAATCAATAATTGAGAAAAGAAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAAGAATCGAGAAGGTTAAAATTACTGAAGATAACTGAAGAAGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTAGGTAAAAAGAAGGGAAGCAGAAAACCGGTTCTTGACTCTGAAAAGTTGTCGAAACAAACTTTAATGCAATTAGCCCTTACTGAACAATTGAGGGAGAAGCAGGAAATGGAAAAGAAATTGCAAAAGCTAGCCAAGACTATGGATTATCTAGAAAGAGCAAAAAGGGAAGAGGCGGCAATTTTAATTGAAGCTGCATTTCAGCAACGTTTGGTTGAAGAGAGAATGATTCATGAACGTAATCAGCAGCTGGAGGTAGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCGAGAATGTTGGAGAGTAAGAGAATTTTCGAAGAAAGAGTCATTAGTCTTCGCCAAGAGGAATTCAGCAGACGGAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGGCCCGGAAAGCAGAAAGGGAGGCTAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTCGAATATTACGTGAAGAGGAGGAAGCTCGCAAGCATGAAGAGGCGGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAATTGGAAGAAAAAGAAAGACTTAGGAAAGAAAGTCTGTTTGGTGGTGGCAGATCAGCTGATGCACCTGCTAGACCTGATGTTGCTCCTGGTTCTCGGCCTCTGGAGTCCGGGACTGCTGCTCCTGCTGCTGCTGCAGCTGCTGCGGCTGCCGGACCTTCCCCAGCAAAATATGTTCCAAGGTTTCGACGGACTGAAGGCTCCAGCCCTAATGCACCGCCACCTGAATCTGATCGATGGGGAAGCAGCCAGCCTGATAATCGACCATCTCATCCGGATAGCTGGCGCAGTGATGAACGTAGACCTGCGTTGGGAAGTTCAAGGACATCATGGTCCTCGTCTCGAGTTCCTAGTCGTGCTAGGACAGACCGCTGATTGTGGTGGCAGATGTGGGAATGTTGATATGAATTTGGAAGTAAAATTTTGGGTTTGATAGGGTAATTCAGTCATTTCTGGAAAAAAAAAAAAAATAATGACTTATTTTTGCTACTAGTATGAGAATTTAAGGGAAGAAGCAGCAACGAAAAGGTTGTAATATTTGTTATGGGTGGAATAGGCGCCCTTTTATTTTCTAAATTATATGAATTATATACTACATGACATGCCTACCATCTTATAGGCCATCATTTTTAACTACATTA | 3527 | 42.05 | MTSFVKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDSNLYHAYAWLKLFSIQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCAIQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQIIPFFNFFAVEKISVDAVKQNFIAMKVDHSRNIVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPVRKASKTSDKLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLSKQTLMQLALTEQLREKQEMEKKLQKLAKTMDYLERAKREEAAILIEAAFQQRLVEERMIHERNQQLEVELSKQRHEGDLKEKNRLARMLESKRIFEERVISLRQEEFSRRRAEREEHIRQIIQARKAEREAKRKKIFYVRREEERIRILREEEEARKHEEAERRKKEEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGGGRSADAPARPDVAPGSRPLESGTAAPAAAAAAAAAGPSPAKYVPRFRRTEGSSPNAPPPESDRWGSSQPDNRPSHPDSWRSDERRPALGSSRTSWSSSRVPSRARTDR | 971 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 33286253 | 33294704 | - | XM_039038605.1 | Bhi08g01012 | 41345 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi08g01012 | 971 | Pfam | PCI domain | 374 | 509 | IPR000717 | - | |
| Bhi08g01012 | 971 | Coils | Coil | 669 | 699 | - | - | |
| Bhi08g01012 | 971 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A | 1 | 914 | - | - | |
| Bhi08g01012 | 971 | SMART | PINT_4 | 441 | 532 | IPR000717 | - | |
| Bhi08g01012 | 971 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 441 | 532 | - | - | |
| Bhi08g01012 | 971 | Coils | Coil | 603 | 649 | - | - | |
| Bhi08g01012 | 971 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 914 | IPR027512 | GO:0005852 | |
| Bhi08g01012 | 971 | Coils | Coil | 799 | 858 | - | - | |
| Bhi08g01012 | 971 | Coils | Coil | 732 | 752 | - | - | |
| Bhi08g01012 | 971 | MobiDBLite | consensus disorder prediction | 917 | 937 | - | - | |
| Bhi08g01012 | 971 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 946 | IPR027512 | GO:0005852 | |
| Bhi08g01012 | 971 | Gene3D | UVR domain | 217 | 268 | - | - | |
| Bhi08g01012 | 971 | Coils | Coil | 561 | 600 | - | - | |
| Bhi08g01012 | 971 | ProSiteProfiles | PCI domain profile. | 316 | 513 | IPR000717 | - | |
| Bhi08g01012 | 971 | MobiDBLite | consensus disorder prediction | 813 | 971 | - | - | |
| Bhi08g01012 | 971 | MobiDBLite | consensus disorder prediction | 813 | 861 | - | - | |
| Bhi08g01012 | 971 | Coils | Coil | 774 | 794 | - | - | |
| Bhi08g01012 | 971 | Coils | Coil | 93 | 120 | - | - | |
| Bhi08g01012 | 971 | Gene3D | - | 363 | 494 | - | - | |
| Bhi08g01012 | 971 | Gene3D | - | 269 | 343 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi08g01010 | Bhi-Chr8:33273650 | Bhi08g01012 | Bhi-Chr8:33286253 | 0 | dispersed | |
| Bhi08g01012 | Bhi-Chr8:33286253 | Bhi08g01014 | Bhi-Chr8:33347482 | 0 | dispersed | |
| Bhi08g01011 | Bhi-Chr8:33286253 | Bhi08g01012 | Bhi-Chr8:33286253 | 0 | tandem | |
| Bhi08g01012 | Bhi-Chr8:33286253 | Bhi08g01013 | Bhi-Chr8:33286253 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi08g01012 | K03254 | - | csv:101215735 | 1559.27 |